HOMD ::species::Veillonella rogosae

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Veillonella rogosae

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Full Lineage: Bacteria; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae; Veillonella; Veillonella rogosae

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.019	0.019	0.172	0.699	1.916	3.011	1.709	2.701	3.050	0.005
10^thp	0.000	0.000	0.000	0.000	0.229	0.200	0.029	0.053	0.054	0.000
90^thp	0.059	0.060	0.430	1.594	4.475	6.870	4.740	7.129	7.363	0.014
Stdev	0.049	0.047	0.316	0.966	2.008	2.887	2.579	3.422	3.326	0.016
Prev	31.169	35.065	66.234	88.312	94.805	93.506	92.208	90.909	94.805	11.688

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to V. atypica, V. denticariosi, V. dispar, V. parvula, and V. rogosae were assigned one-fifth to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.797	0.753	0.281	0.574	1.169	2.319	1.553	1.414	2.010	0.007
10^thp	0.066	0.076	0.003	0.079	0.321	0.867	0.546	0.460	0.807	0.000
90^thp	2.046	1.714	0.783	1.403	2.305	3.923	2.690	2.609	3.266	0.011
Stdev	1.112	0.856	0.595	0.559	0.775	1.193	0.848	0.870	0.966	0.038
Prev	98.649	100.000	91.216	100.000	100.000	100.000	100.000	100.000	100.000	29.371

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 158, 160, and 161 were distributed equally among taxa.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.016	0.045	0.508	0.851	1.195	1.078	1.641	1.041	1.482	0.005
10^thp	0.000	0.003	0.004	0.013	0.121	0.027	0.077	0.020	0.014	0.000
90^thp	0.039	0.111	1.762	2.220	2.973	2.306	3.167	2.453	3.616	0.000
Stdev	0.025	0.093	0.827	1.115	1.548	0.867	4.069	1.634	1.823	0.021
Prev	78.378	91.176	97.674	100.000	100.000	98.000	100.000	96.774	100.000	5.000