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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.02   |  Genomic RefSeq: V11.01
Class: Negativicutes
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacillota; Negativicutes

Lower rank member(s): [Order:Selenomonadales] [Order:Veillonellales]
Genera:
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)6.1034.8905.8774.4117.11315.50311.74211.38612.1430.2720.1840.1070.6090.7401.3391.0191.1271.337
10thp1.1850.4840.2710.7122.0445.6484.3294.3716.5060.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp13.9559.65016.2698.73814.23927.34119.49318.76318.1250.7240.2520.2401.9191.7633.8990.8450.9082.474
Stdev5.5714.7646.4034.3574.6318.2206.0356.2174.7900.6520.8420.3841.0961.5033.9623.5854.1325.529
Prev(%)100.00099.33899.301100.000100.00099.23199.702100.000100.00070.66753.73646.74268.96666.35947.88745.94628.94734.641

HMP 16S RefSeq (V3-V5) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)8.1586.50811.0827.93113.17121.49416.07914.07316.5310.6600.8370.7121.9872.0421.1110.5571.0160.977
10thp1.8320.8430.6691.4274.4818.4085.1354.4936.8990.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp16.83013.96028.25717.89125.13037.91230.22525.13829.5211.6951.7211.3814.1595.7343.3410.0341.1572.849
Stdev7.0225.24211.1887.4538.73611.6889.6328.8889.2261.4932.6572.1763.7633.0923.2231.9984.0052.673
Prev(%)99.753100.00099.01299.752100.000100.000100.000100.000100.00082.37567.83464.81586.20788.66764.36813.11525.65442.579

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)4.9447.0113.2964.5024.5254.1768.0125.6666.0660.030
10thp0.2340.7690.0760.3040.6770.6612.5611.0090.1550.000
90thp12.12716.6859.48711.2538.4519.79513.74210.29611.9320.133
Stdev6.4646.4304.1915.2973.0273.4695.3633.6674.4320.063
Prev(%)100.000100.000100.000100.000100.000100.000100.000100.000100.00025.000

HMP Metaphlan (not published)
No Notes
SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)5.5415.1999.0667.6165.8233.72012.42412.34413.28914.7900.3940.1520.0140.8200.3260.6140.8590.900
10thp1.2740.7751.8600.4920.6603.7206.9565.0103.0447.9850.0000.0000.0000.8200.0000.0000.0000.000
90thp9.73210.68516.50912.19412.7703.72019.89223.44521.75222.4400.1470.2160.0200.8201.4100.3972.0802.623
Stdev4.0634.1796.7787.7295.2910.0005.9748.0037.0355.7852.2210.5710.0480.0000.7462.0843.5312.054
Prev(%)100.00099.495100.00094.11899.468100.000100.000100.000100.00099.53119.82033.33318.750100.00018.18228.57124.24264.545

Eren V1-V3 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)5.4614.3564.8313.5716.33015.79011.24710.44311.7711.730
10thp0.9170.5120.2680.3942.2786.5464.1442.8155.1930.000
90thp12.6489.45513.2488.04912.95226.06218.79919.26116.9874.183
Stdev5.5074.7445.3113.5444.0407.1606.4225.7785.1195.528
Prev(%)98.701100.000100.000100.000100.000100.000100.000100.000100.00055.844

Eren V3-V5 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)7.0575.9465.0723.4486.53615.9369.9298.64010.7730.683
10thp1.7251.3700.2540.5881.8595.8683.6032.8364.0360.000
90thp15.01210.79412.9517.67512.78425.18816.40215.95917.9212.625
Stdev5.9604.6055.5053.0284.3877.6615.7035.0365.3981.420
Prev(%)100.000100.00099.324100.000100.000100.000100.000100.000100.00056.643