HOMD ::Genus:Veillonella

Genus: Veillonella

Full Lineage: Bacteria; Bacillota; Negativicutes; Veillonellales; Veillonellaceae; Veillonella Each rank name is a link to abundance plots at that rank:

Lower rank member(s): show[+]

LINKS: Ecology Home | Life Page: Veillonella

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	3.923	3.371	4.781	3.423	5.865	12.012	9.275	8.869	10.981	0.045
10^thp	0.323	0.226	0.268	0.394	2.122	4.511	3.498	2.201	5.083	0.000
90^thp	10.257	6.871	13.248	7.735	11.860	21.393	15.363	16.865	15.260	0.131
Stdev	5.055	4.352	5.293	3.459	3.771	6.147	5.639	5.139	4.644	0.120
Prev(%)	98.701	100.000	100.000	98.701	100.000	100.000	100.000	100.000	100.000	37.662

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	4.022	3.788	4.824	3.150	5.946	11.764	8.148	7.196	10.091	0.043
10^thp	0.339	0.402	0.254	0.523	1.640	4.351	2.956	2.376	4.036	0.000
90^thp	10.454	8.638	12.599	7.308	11.620	19.948	13.916	13.271	16.350	0.060
Stdev	5.576	4.277	5.401	2.808	3.871	6.022	4.782	4.349	4.887	0.199
Prev(%)	98.649	100.000	98.649	100.000	100.000	100.000	100.000	100.000	100.000	30.070

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	4.018	3.957	5.602	4.411	6.634	12.236	9.855	9.727	11.390	0.234	0.178	0.101	0.448	0.618	0.000	0.000	0.000	0.000
10^thp	0.384	0.268	0.271	0.712	1.872	4.566	3.630	3.375	6.286	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	10.887	8.536	16.114	8.738	12.208	21.882	16.340	17.261	17.001	0.601	0.246	0.222	1.349	1.380	0.000	0.000	0.000	0.000
Stdev	4.959	4.549	6.115	4.357	4.200	6.994	5.177	6.080	4.496	0.569	0.823	0.382	0.786	1.452	0.000	0.000	0.000	0.000
Prev(%)	100.000	99.338	99.301	100.000	100.000	98.462	99.702	100.000	100.000	68.000	52.874	45.892	64.368	63.594	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	5.227	5.039	10.648	7.560	12.145	15.873	13.380	11.772	15.524	0.390	0.735	0.568	1.385	1.549	0.000	0.000	0.000	0.000
10^thp	0.496	0.523	0.609	1.316	4.226	6.178	3.871	3.271	6.479	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	13.851	12.174	27.344	17.168	22.948	28.922	26.043	21.784	28.406	1.014	1.170	0.795	2.601	4.656	0.000	0.000	0.000	0.000
Stdev	6.654	5.070	11.058	7.328	7.974	9.414	8.429	8.331	8.707	0.810	2.608	2.078	3.181	2.790	0.000	0.000	0.000	0.000
Prev(%)	99.506	100.000	98.765	99.504	99.744	99.702	100.000	100.000	100.000	73.946	55.732	55.247	70.345	75.333	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	3.570	5.331	3.185	4.292	4.343	3.849	7.350	5.114	5.842	0.013
10^thp	0.029	0.228	0.074	0.301	0.676	0.597	1.860	0.977	0.154	0.000
90^thp	11.368	15.030	9.294	9.859	8.283	9.217	12.469	9.960	11.600	0.020
Stdev	6.592	5.947	4.087	5.199	2.800	3.105	5.286	3.585	4.302	0.037
Prev(%)	98.649	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	15.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	4.040	4.023	3.333	7.559	5.657	3.380	10.455	10.913	11.495	13.661	0.311	0.134	0.013	0.820	0.128	0.424	0.162	0.100
10^thp	0.803	0.435	0.020	0.492	0.640	3.380	6.665	3.025	2.428	7.330	0.000	0.000	0.000	0.820	0.000	0.000	0.000	0.000
90^thp	7.977	9.315	8.404	12.170	12.365	3.380	15.373	20.425	18.308	20.370	0.100	0.072	0.019	0.820	0.000	0.187	0.033	0.060
Stdev	3.513	3.966	6.243	7.740	5.169	0.000	4.426	7.202	6.622	5.292	2.027	0.571	0.048	0.000	0.425	1.503	1.034	1.050
Prev(%)	100.000	99.242	91.667	94.118	99.468	100.000	100.000	100.000	100.000	99.531	17.117	25.000	15.625	100.000	9.091	21.429	12.121	24.909

[Species:Veillonella atypica]	[Species:Veillonella denticariosi]	[Species:Veillonella dispar]	[Species:Veillonella nakazawae]	[Species:Veillonella parvula]
[Species:Veillonella rogosae]	[Species:Veillonella sp. HMT-157]	[Species:Veillonella sp. HMT-779]	[Species:Veillonella sp. HMT-780]	[Species:Veillonella sp. HMT-917]
[Species:Veillonella tobetsuensis]

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