HOMD ::species::Selenomonas sp._HMT_478

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Selenomonas sp._HMT_478

Download Options

Full Lineage: Bacteria; Firmicutes; Negativicutes; Selenomonadales; Selenomonadaceae; Selenomonas; Selenomonas sp._HMT_478

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.001	0.000	0.000	0.002	0.016	0.173	0.072	0.054	0.021	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.048	0.508	0.102	0.118	0.053	0.000
Stdev	0.005	0.000	0.002	0.012	0.051	0.383	0.199	0.145	0.070	0.000
Prev	2.597	0.000	1.299	3.896	22.078	46.753	38.961	36.364	31.169	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. sp. HMT 136, 149, and 478 were assigned one-third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.022	0.012	0.002	0.016	0.060	0.748	0.234	0.162	0.065	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.006	0.000	0.000	0.000	0.000
90^thp	0.053	0.031	0.000	0.040	0.184	2.374	0.582	0.479	0.191	0.000
Stdev	0.061	0.035	0.007	0.034	0.093	1.129	0.312	0.307	0.112	0.000
Prev	41.892	28.378	8.784	47.297	71.622	89.865	87.162	75.676	66.216	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.006	0.003	0.002	0.002	0.001	0.005	0.013	0.011	0.003	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.016	0.008	0.006	0.008	0.006	0.015	0.045	0.023	0.010	0.000
Stdev	0.019	0.007	0.003	0.004	0.003	0.009	0.024	0.029	0.007	0.000
Prev	28.378	35.294	30.233	20.000	17.857	42.000	72.727	48.387	30.000	0.000