HOMD ::Order:Selenomonadales

Order: Selenomonadales

Full Lineage: Bacteria; Bacillota; Negativicutes; Selenomonadales Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Family:Selenomonadaceae]
Genera:

LINKS: Ecology Home | Life Page: Selenomonadales

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.259	0.911	0.044	0.079	0.241	2.963	1.272	0.981	0.367	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.227	0.000	0.011	0.000	0.000
90^thp	3.791	2.368	0.089	0.235	0.569	7.722	3.137	3.081	0.861	0.000
Stdev	1.917	1.661	0.133	0.103	0.385	3.393	1.964	2.111	0.863	0.004
Prev(%)	83.117	79.221	32.468	57.143	79.221	97.403	88.312	89.610	75.325	1.299

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	2.527	1.994	0.231	0.187	0.259	3.291	1.024	0.908	0.244	0.000
10^thp	0.091	0.048	0.000	0.000	0.000	0.280	0.035	0.014	0.000	0.000
90^thp	5.444	5.488	0.423	0.580	0.687	8.998	2.741	2.669	0.675	0.000
Stdev	2.440	2.139	0.860	0.279	0.326	4.078	1.407	1.663	0.375	0.003
Prev(%)	97.973	93.919	41.892	76.351	85.135	99.324	95.270	90.541	76.351	0.699

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.733	0.887	0.275	0.000	0.152	2.363	1.021	1.002	0.250	0.000	0.000	0.000	0.043	0.040	0.000	0.000	0.000	0.000
10^thp	0.023	0.000	0.000	0.000	0.000	0.122	0.000	0.005	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	4.378	2.598	0.337	0.000	0.397	5.837	2.594	2.661	0.680	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	2.120	1.400	1.765	0.000	0.299	2.828	2.031	1.748	0.383	0.000	0.000	0.000	0.436	0.203	0.000	0.000	0.000	0.000
Prev(%)	94.040	84.768	44.056	0.000	70.470	93.077	88.988	90.000	79.355	0.000	0.000	0.000	8.046	6.452	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	2.416	1.378	0.434	0.205	0.494	4.563	1.769	1.515	0.462	0.024	0.030	0.061	0.263	0.208	0.000	0.004	0.000	0.003
10^thp	0.100	0.017	0.000	0.000	0.000	0.313	0.035	0.039	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	5.870	3.915	0.826	0.497	1.390	11.878	4.345	3.901	1.259	0.048	0.031	0.062	0.494	0.467	0.000	0.000	0.000	0.000
Stdev	2.504	1.821	1.809	0.462	0.727	5.734	3.038	2.718	0.838	0.173	0.167	0.287	1.008	0.615	0.000	0.033	0.000	0.062
Prev(%)	97.037	91.951	48.642	60.794	82.353	98.512	92.523	93.187	81.995	14.176	14.650	15.432	28.276	23.333	0.000	3.825	0.000	0.243

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.967	1.496	0.066	0.120	0.057	0.085	0.227	0.221	0.050	0.001
10^thp	0.013	0.083	0.000	0.000	0.000	0.000	0.006	0.006	0.000	0.000
90^thp	2.662	4.162	0.256	0.415	0.104	0.259	0.849	0.431	0.200	0.001
Stdev	1.309	1.894	0.110	0.253	0.117	0.122	0.397	0.429	0.082	0.002
Prev(%)	93.243	97.059	76.744	82.857	85.714	86.000	93.939	93.548	85.000	10.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.004	1.083	4.669	0.055	0.095	0.320	0.775	0.593	0.988	0.358	0.010	0.000	0.000	0.000	0.000	0.157	0.001	0.001
10^thp	0.122	0.000	0.936	0.000	0.000	0.320	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.115	3.245	8.331	0.168	0.235	0.320	2.067	1.635	3.514	0.930	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.853	1.466	3.176	0.144	0.364	0.000	0.974	1.013	1.927	0.607	0.114	0.000	0.000	0.000	0.000	0.588	0.012	0.010
Prev(%)	95.833	85.606	95.833	23.529	33.245	100.000	75.000	68.750	76.000	84.742	1.351	0.000	0.000	0.000	0.000	7.143	0.505	1.636

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