HOMD ::species::Schaalia sp._HMT

Species: Schaalia sp._HMT_180

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Full Lineage: Bacteria; Actinobacteria; Actinomycetia; Actinomycetales; Actinomycetaceae; Schaalia; Schaalia sp._HMT_180

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to S. sp. HMT 172 and S. sp. HMT 180 were assigned half to each taxon

reads equally close to S. odontolytica, S. sp. HMT 172, and S. sp. HMT 180 were assigned one third to each taxon

reads equally close to S. meyeri, S. sp. HMT 172, and S. sp. HMT 180 were assigned one third to each taxon

reads equally close to S. lingnae [Not Validly Published], S. sp. HMT 172, and S. sp. HMT 180 were assigned one third to each taxon

reads equally close to S. meyeri and S. sp. HMT 180 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.174	0.084	0.073	0.225	1.027	0.738	2.198	1.714	2.969	0.001
10^thp	0.000	0.000	0.000	0.000	0.046	0.060	0.165	0.103	0.145	0.000
90^thp	0.337	0.266	0.230	0.435	2.272	1.824	4.988	4.042	6.743	0.000
Stdev	0.447	0.146	0.179	0.414	1.179	0.905	2.188	1.753	2.888	0.004
Prev	74.026	71.429	53.247	84.416	97.403	93.506	98.701	97.403	100.000	9.091

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. meyeri, S. odontolytica, S. lingnae [Not Validly Published], S. sp. HMT 172, and S. sp. HMT 180 were divided equally among taxa.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.047	0.022	0.026	0.103	0.427	0.269	0.551	0.463	0.815	0.000
10^thp	0.000	0.000	0.000	0.000	0.096	0.053	0.102	0.053	0.132	0.000
90^thp	0.084	0.055	0.084	0.291	0.998	0.643	1.184	1.038	2.051	0.000
Stdev	0.175	0.043	0.071	0.140	0.365	0.301	0.483	0.493	0.737	0.002
Prev	70.946	69.595	39.865	89.189	99.324	100.000	97.973	97.973	99.324	5.594

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 180 and 701 were assigned half to each taxon.

Reads equally close to HMT 172 and 180 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.157	0.126	1.063	0.163	0.395	0.673	0.842	0.694	1.055	0.000
10^thp	0.003	0.005	0.000	0.004	0.028	0.053	0.067	0.083	0.011	0.000
90^thp	0.253	0.249	5.118	0.379	0.927	1.763	1.324	1.426	1.785	0.000
Stdev	0.547	0.167	2.471	0.268	0.524	0.920	1.322	0.864	1.284	0.000
Prev	94.595	97.059	86.047	100.000	100.000	98.000	100.000	96.774	95.000	0.000

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