HOMD ::species::Schaalia odontolytica

Species: Schaalia odontolytica

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Full Lineage: Bacteria; Actinobacteria; Actinomycetia; Actinomycetales; Actinomycetaceae; Schaalia; Schaalia odontolytica

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to S. odontolytica, S. sp. HMT 172, and S. sp. HMT 180 were assigned one third to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.004	0.006	0.002	0.019	0.070	0.040	0.132	0.093	0.205	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.028	0.125	0.089	0.402	0.274	0.278	0.000
Stdev	0.032	0.048	0.009	0.084	0.201	0.161	0.348	0.248	0.709	0.002
Prev	5.195	2.597	7.792	14.286	33.766	28.571	36.364	37.662	44.156	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. meyeri, S. odontolytica, S. lingnae [Not Validly Published], S. sp. HMT 172, and S. sp. HMT 180 were divided equally among taxa.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.047	0.022	0.026	0.103	0.427	0.269	0.551	0.463	0.815	0.000
10^thp	0.000	0.000	0.000	0.000	0.096	0.053	0.102	0.053	0.132	0.000
90^thp	0.084	0.055	0.084	0.291	0.998	0.643	1.184	1.038	2.051	0.000
Stdev	0.175	0.043	0.071	0.140	0.365	0.301	0.483	0.493	0.737	0.002
Prev	70.946	69.595	39.865	89.189	99.324	100.000	97.973	97.973	99.324	5.594

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 180 and 701 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.015	0.046	0.858	0.119	0.342	0.564	0.505	0.578	0.862	0.003
10^thp	0.000	0.000	0.000	0.000	0.018	0.098	0.084	0.096	0.008	0.000
90^thp	0.043	0.118	3.870	0.269	0.854	0.986	1.152	1.456	1.717	0.007
Stdev	0.023	0.075	2.044	0.141	0.367	0.597	0.461	0.624	0.950	0.010
Prev	74.324	79.412	83.721	85.714	89.286	98.000	96.970	100.000	97.500	15.000

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