HOMD ::species::Neisseria cinerea

Species: Neisseria cinerea

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Full Lineage: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria cinerea

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to N. cinerea, N. meningitidis, and N. polysaccharea were assigned one third to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.004	0.007	0.441	0.020	0.061	0.009	0.029	0.006	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.009	0.012	1.660	0.032	0.073	0.027	0.021	0.023	0.000	0.000
Stdev	0.014	0.032	1.358	0.073	0.285	0.028	0.212	0.014	0.009	0.000
Prev	12.987	16.883	37.662	22.078	29.870	19.481	18.182	24.675	5.195	0.000

From: Eren et al.(2014) (V3-V5)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.010	0.015	1.325	0.078	0.164	0.061	0.021	0.102	0.006	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.011	0.009	3.600	0.165	0.202	0.105	0.027	0.043	0.001	0.000
Stdev	0.040	0.069	4.240	0.308	0.857	0.320	0.117	0.661	0.050	0.000
Prev	10.811	11.486	33.784	25.000	28.378	24.324	14.189	16.216	10.135	0.000

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 669 and 956 were assigned half to each taxon.

Reads equally close to HMT 669, 737, and 956 were assigned one third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.003	0.001	0.033	0.011	0.045	0.047	0.030	0.024	0.086	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.003	0.002	0.028	0.019	0.107	0.072	0.080	0.014	0.261	0.000
Stdev	0.014	0.003	0.146	0.038	0.108	0.139	0.081	0.090	0.224	0.000
Prev	21.622	26.471	55.814	51.429	78.571	48.000	51.515	54.839	52.500	0.000

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