Order: Neisseriales
Download OptionsLower rank member(s): [Family:Neisseriaceae]
Genera:
LINKS: Ecology Home
| Life Page: Neisseriales
Hide Legend
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 8.371 | 10.339 | 3.560 | 4.508 | 5.741 | 5.097 | 7.512 | 6.584 | 9.151 | 1.900 | 1.516 | 1.851 | 0.984 | 1.123 | 0.106 | 0.000 | 0.000 | 0.000 |
| 10thp | 1.365 | 2.995 | 0.027 | 0.381 | 0.522 | 0.469 | 0.201 | 0.158 | 0.120 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 17.268 | 21.911 | 10.331 | 11.144 | 14.047 | 11.457 | 21.446 | 19.318 | 24.328 | 4.655 | 0.865 | 1.174 | 2.414 | 2.716 | 0.026 | 0.000 | 0.000 | 0.000 |
| Stdev | 7.735 | 8.444 | 5.299 | 4.575 | 6.394 | 5.514 | 11.450 | 9.019 | 9.774 | 5.561 | 8.760 | 9.751 | 2.447 | 2.902 | 0.565 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 100.000 | 99.338 | 96.503 | 97.260 | 99.329 | 98.462 | 98.214 | 98.000 | 99.355 | 81.667 | 64.655 | 57.507 | 71.839 | 70.968 | 12.676 | 0.000 | 0.000 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 3.536 | 4.737 | 4.109 | 4.218 | 8.544 | 5.496 | 8.076 | 6.094 | 10.429 | 2.382 | 1.782 | 2.321 | 1.903 | 1.975 | 0.003 | 0.000 | 0.001 | 0.007 |
| 10thp | 0.562 | 1.097 | 0.054 | 0.379 | 0.625 | 0.466 | 0.161 | 0.167 | 0.234 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 7.332 | 10.224 | 12.302 | 8.908 | 21.096 | 14.256 | 21.173 | 17.832 | 26.438 | 6.346 | 1.730 | 2.932 | 4.611 | 5.351 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 3.734 | 3.993 | 6.607 | 6.245 | 8.536 | 6.190 | 12.574 | 7.723 | 11.666 | 6.877 | 8.197 | 9.224 | 5.399 | 4.624 | 0.033 | 0.000 | 0.007 | 0.051 |
| Prev(%) | 99.753 | 99.756 | 92.840 | 98.759 | 98.465 | 99.405 | 96.262 | 98.054 | 98.297 | 69.349 | 61.146 | 70.370 | 79.310 | 72.667 | 2.874 | 0.000 | 1.571 | 8.273 |
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 3.159 | 2.196 | 3.412 | 3.402 | 7.849 | 5.852 | 4.541 | 3.711 | 6.976 | 0.755 |
| 10thp | 0.032 | 0.192 | 0.032 | 0.067 | 0.762 | 0.086 | 0.077 | 0.067 | 0.107 | 0.000 |
| 90thp | 9.174 | 4.271 | 11.299 | 7.131 | 20.331 | 18.758 | 11.973 | 10.031 | 17.260 | 1.701 |
| Stdev | 5.658 | 3.804 | 8.084 | 5.238 | 9.567 | 8.179 | 6.647 | 4.852 | 9.985 | 1.581 |
| Prev(%) | 98.649 | 100.000 | 97.674 | 100.000 | 100.000 | 98.000 | 96.970 | 96.774 | 100.000 | 65.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 4.880 | 7.581 | 1.908 | 3.412 | 3.641 | 5.850 | 6.282 | 14.788 | 7.406 | 9.062 | 0.408 | 0.054 | 0.164 | 2.210 | 0.055 | 0.396 | 0.204 | 0.015 |
| 10thp | 1.684 | 2.000 | 0.003 | 0.000 | 0.160 | 5.850 | 1.295 | 0.000 | 0.042 | 0.130 | 0.000 | 0.000 | 0.000 | 2.210 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 10.643 | 14.770 | 5.743 | 9.236 | 8.430 | 5.850 | 10.892 | 33.280 | 18.518 | 23.570 | 0.279 | 0.215 | 0.106 | 2.210 | 0.000 | 0.000 | 0.059 | 0.000 |
| Stdev | 3.658 | 6.233 | 3.775 | 4.259 | 4.335 | 0.000 | 4.005 | 15.034 | 12.253 | 10.734 | 2.019 | 0.124 | 0.675 | 0.000 | 0.181 | 1.483 | 1.267 | 0.181 |
| Prev(%) | 100.000 | 99.747 | 87.500 | 82.353 | 95.479 | 100.000 | 87.500 | 81.250 | 92.000 | 96.948 | 22.523 | 45.833 | 28.125 | 100.000 | 9.091 | 7.143 | 14.646 | 3.455 |
Eren V1-V3 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 7.383 | 8.679 | 2.478 | 3.371 | 4.669 | 4.911 | 6.221 | 6.618 | 9.931 | 0.005 |
| 10thp | 1.054 | 1.642 | 0.000 | 0.274 | 0.412 | 0.567 | 0.157 | 0.156 | 0.079 | 0.000 |
| 90thp | 17.919 | 19.156 | 8.450 | 8.260 | 9.876 | 12.082 | 16.100 | 16.041 | 28.304 | 0.000 |
| Stdev | 8.243 | 7.886 | 4.779 | 4.063 | 4.589 | 5.005 | 8.544 | 8.263 | 11.382 | 0.028 |
| Prev(%) | 98.701 | 100.000 | 84.416 | 97.403 | 98.701 | 98.701 | 97.403 | 96.104 | 98.701 | 9.091 |
Eren V3-V5 www.pnas.org
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 5.479 | 8.520 | 2.211 | 3.641 | 7.064 | 6.466 | 5.577 | 5.388 | 10.396 | 0.001 |
| 10thp | 0.737 | 2.092 | 0.000 | 0.387 | 0.538 | 0.827 | 0.130 | 0.159 | 0.285 | 0.000 |
| 90thp | 12.840 | 18.603 | 7.182 | 8.005 | 19.491 | 14.321 | 14.128 | 15.530 | 27.172 | 0.000 |
| Stdev | 5.958 | 6.920 | 4.496 | 3.979 | 7.434 | 6.191 | 7.169 | 6.260 | 11.402 | 0.003 |
| Prev(%) | 99.324 | 100.000 | 87.838 | 99.324 | 99.324 | 99.324 | 98.649 | 96.622 | 98.649 | 2.797 |
