HOMD ::Family:Weeksellaceae

Family: Weeksellaceae

Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Genus:Chryseobacterium] [Genus:Cloacibacterium] [Genus:Riemerella] [Genus:Weeksellaceae [G1]]

LINKS: Ecology Home | Life Page: Weeksellaceae

Hide Legend

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.217	1.709	0.999	0.717	0.271	0.570	0.457	0.502	0.274	0.000
10^thp	0.138	0.244	0.044	0.062	0.019	0.000	0.000	0.000	0.000	0.000
90^thp	2.481	3.443	2.654	1.629	0.574	1.072	1.026	1.078	0.640	0.000
Stdev	1.097	1.443	1.255	1.030	0.292	1.031	0.960	0.840	0.409	0.001
Prev(%)	100.000	100.000	93.506	97.403	90.909	84.416	84.416	81.818	79.221	1.299

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.438	0.622	0.372	0.618	0.155	0.330	0.238	0.210	0.126	0.000
10^thp	0.006	0.059	0.000	0.020	0.000	0.019	0.000	0.000	0.000	0.000
90^thp	1.098	1.247	0.795	1.063	0.380	0.761	0.536	0.482	0.340	0.000
Stdev	0.469	0.615	0.872	2.582	0.186	0.448	0.561	0.315	0.252	0.000
Prev(%)	89.865	94.595	77.027	92.568	81.081	91.216	77.027	79.730	65.541	0.000

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.316	1.589	1.220	0.789	0.241	0.556	0.288	0.425	0.211	0.034	0.055	0.040	0.173	0.179	0.000	0.000	0.000	0.000
10^thp	0.126	0.331	0.137	0.061	0.000	0.000	0.000	0.012	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.828	3.035	2.577	1.779	0.541	1.393	0.700	0.838	0.508	0.104	0.048	0.068	0.302	0.404	0.000	0.000	0.000	0.000
Stdev	1.835	1.335	1.417	0.916	0.251	0.738	0.426	0.747	0.311	0.095	0.271	0.185	0.749	0.707	0.000	0.000	0.000	0.000
Prev(%)	99.338	100.000	96.503	94.521	87.248	87.692	84.821	91.333	85.806	28.000	25.000	25.496	22.414	29.493	0.000	0.000	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.137	1.592	2.114	1.785	0.431	0.580	0.265	0.442	0.260	0.000	0.068	0.086	0.123	0.000	0.000	0.000	0.000	0.000
10^thp	0.177	0.403	0.177	0.168	0.000	0.046	0.000	0.017	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.529	3.257	4.171	3.658	0.943	1.196	0.672	0.963	0.610	0.000	0.041	0.043	0.486	0.000	0.000	0.000	0.000	0.000
Stdev	1.103	1.274	4.332	3.509	0.485	0.720	0.450	0.661	0.327	0.000	0.403	0.498	0.336	0.000	0.000	0.000	0.000	0.000
Prev(%)	98.519	99.756	96.543	97.767	85.934	92.262	76.324	91.484	86.131	0.000	15.287	14.815	25.517	0.000	0.000	0.000	0.000	0.000

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.183	0.283	0.047	0.060	0.055	0.037	0.041	0.029	0.027	0.001
10^thp	0.002	0.011	0.003	0.008	0.002	0.005	0.000	0.002	0.000	0.000
90^thp	0.379	0.616	0.115	0.111	0.127	0.094	0.079	0.085	0.065	0.000
Stdev	0.512	0.447	0.083	0.076	0.069	0.042	0.086	0.037	0.039	0.002
Prev(%)	90.541	97.059	95.349	94.286	89.286	94.000	84.848	90.323	80.000	5.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.008	0.000	0.000	0.001	0.011	0.000	0.000	0.000	0.000	0.000	0.015	0.000	0.000	0.480	0.000	0.000	0.004	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.480	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.480	0.000	0.000	0.000	0.000
Stdev	0.028	0.003	0.000	0.005	0.064	0.000	0.000	0.000	0.000	0.000	0.108	0.000	0.000	0.000	0.000	0.000	0.055	0.001
Prev(%)	8.333	1.263	0.000	5.882	6.649	0.000	0.000	0.000	0.000	0.000	3.604	0.000	0.000	100.000	0.000	0.000	1.010	0.364

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