HOMD ::species::Rothia dentocariosa

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Rothia dentocariosa

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Full Lineage: Bacteria; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae; Rothia; Rothia dentocariosa

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to R. aeria and R. dentocariosa were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	3.671	4.889	0.131	0.794	0.194	0.415	0.140	0.061	0.018	0.001
10^thp	0.299	0.556	0.000	0.049	0.012	0.000	0.000	0.000	0.000	0.000
90^thp	8.169	11.719	0.285	1.789	0.528	1.089	0.125	0.126	0.049	0.000
Stdev	4.098	4.665	0.362	1.965	0.374	0.621	0.835	0.172	0.034	0.003
Prev	96.104	97.403	63.636	97.403	93.506	88.312	59.740	59.740	49.351	5.195

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to R. dentocariosa and R. mucilaginosa were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.474	0.880	0.087	0.518	0.523	0.215	0.246	0.201	0.658	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.464	2.424	0.151	1.374	1.417	0.502	0.662	0.506	1.757	0.000
Stdev	0.968	1.860	0.325	1.170	0.771	0.350	0.360	0.316	1.040	0.001
Prev	68.919	74.324	39.865	71.622	80.405	74.324	70.946	73.649	80.405	1.399

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 188 and 587 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	2.935	1.275	0.104	1.291	0.341	0.149	0.084	0.027	0.019	0.000
10^thp	0.010	0.061	0.000	0.121	0.014	0.010	0.003	0.000	0.000	0.000
90^thp	9.214	3.875	0.257	4.347	1.258	0.295	0.154	0.047	0.028	0.000
Stdev	5.909	1.782	0.213	2.200	0.552	0.305	0.232	0.059	0.058	0.000
Prev	97.297	100.000	88.372	100.000	100.000	100.000	90.909	77.419	77.500	0.000