HOMD ::species::Prevotella sp._HMT_472

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Prevotella sp._HMT_472

Download Options

Full Lineage: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella sp._HMT_472

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to P. sp. HMT 317 and P. sp. HMT 472 were assigned half to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.274	0.268	0.007	0.016	0.006	0.030	0.022	0.031	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.936	0.630	0.017	0.062	0.017	0.089	0.027	0.036	0.000	0.000
Stdev	0.399	0.821	0.034	0.036	0.022	0.058	0.137	0.145	0.005	0.000
Prev	63.636	49.351	12.987	28.571	15.584	36.364	18.182	16.883	5.195	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. loescheii and P. sp. HMT 472 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.821	0.510	0.064	0.029	0.015	0.076	0.014	0.029	0.005	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.602	1.415	0.032	0.086	0.044	0.260	0.021	0.032	0.011	0.000
Stdev	1.776	1.340	0.567	0.086	0.051	0.136	0.092	0.148	0.021	0.003
Prev	64.865	59.459	13.514	30.405	20.946	47.297	11.486	18.243	13.514	0.699

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.355	0.267	0.113	0.034	0.019	0.011	0.004	0.003	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.089	0.684	0.063	0.074	0.019	0.032	0.009	0.008	0.004	0.000
Stdev	0.970	0.842	0.609	0.089	0.051	0.023	0.006	0.006	0.002	0.000
Prev	71.622	79.412	53.488	65.714	71.429	62.000	54.545	35.484	22.500	0.000