HOMD ::species::Prevotella histicola

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Prevotella histicola

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Full Lineage: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella histicola

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to P. histicola, P. veroralis, and P. sp. HMT 313 were assigned one third to each taxon

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.042	0.052	0.014	0.207	0.445	0.644	0.943	0.742	0.759	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.171	0.112	0.030	0.385	1.037	1.963	2.194	1.732	2.139	0.000
Stdev	0.107	0.175	0.051	0.638	0.950	1.159	1.588	1.533	1.488	0.002
Prev	32.468	25.974	23.377	61.039	76.623	76.623	84.416	85.714	76.623	3.896

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. histicola and P. sp. HMT 306 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.025	0.018	0.021	0.239	0.607	1.067	1.324	1.060	1.055	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.016	0.013	0.050	0.323	1.483	2.809	3.199	2.502	2.728	0.000
Stdev	0.137	0.133	0.073	0.739	1.188	2.021	1.848	1.589	1.650	0.001
Prev	16.892	14.189	25.000	59.459	79.054	84.459	86.486	83.108	81.081	1.399

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 298 and 572 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.045	0.134	0.059	0.324	0.747	2.267	2.692	2.037	1.703	0.001
10^thp	0.000	0.000	0.000	0.001	0.003	0.000	0.008	0.036	0.000	0.000
90^thp	0.064	0.086	0.106	0.452	1.967	5.337	4.594	4.868	5.279	0.000
Stdev	0.140	0.495	0.163	0.867	1.265	5.347	5.257	3.956	2.460	0.002
Prev	59.459	58.824	74.419	88.571	92.857	88.000	100.000	96.774	85.000	5.000