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16S rRNA RefSeq: V15.22    Genomic RefSeq: V9.15
Abundance by Oral Habitat
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Rank Level: Species: List of the ten most abundant taxa at each oral site.
The abundance values are taken by averaging the available relative abundance data from the four studies:
segata (2012), Eren (2014) V1-V3 and V3-V5 and Dewhirst (unpublished)
Sub-gingival Plaque (SubP)(all)
Species
% Abund
Fusobacterium nucleatum9.232
Corynebacterium matruchotii4.576
Streptococcus oralis4.417
Streptococcus sanguinis2.750
Rothia aeria2.422
Rothia dentocariosa2.360
Lautropia mirabilis2.277
Veillonella parvula2.102
Prevotella oris1.962
Haemophilus parainfluenzae1.869
Sum:33.967
Supra-gingival Plaque (SupP)(all)
Species
% Abund
Streptococcus oralis6.364
Corynebacterium matruchotii5.836
Fusobacterium nucleatum5.019
Streptococcus sanguinis4.078
Lautropia mirabilis3.052
Haemophilus parainfluenzae3.043
Rothia aeria2.949
Rothia dentocariosa2.348
Veillonella parvula2.229
Capnocytophaga sputigena2.003
Sum:36.921
Keratinized Gingiva (KG)(all)
Species
% Abund
Streptococcus oralis14.992
Streptococcus mitis8.991
Haemophilus parainfluenzae6.753
Streptococcus infantis5.832
Streptococcus sp._HMT_4234.365
Alloprevotella sp._HMT_4734.085
Streptococcus salivarius3.942
Streptococcus sp._HMT_0743.098
Gemella haemolysans2.969
Streptococcus cristatus2.680
Sum:57.707
Buccal Mucosa (BM)(all)
Species
% Abund
Streptococcus oralis16.973
Streptococcus mitis6.637
Streptococcus infantis6.395
Haemophilus parainfluenzae5.962
Streptococcus sp._HMT_4234.232
Gemella haemolysans4.174
Streptococcus salivarius3.404
Streptococcus sp._HMT_0743.320
Streptococcus cristatus2.976
Streptococcus australis2.180
Sum:56.253
Hard Palate (HP)(all)
Species
% Abund
Streptococcus oralis10.551
Streptococcus salivarius8.270
Streptococcus infantis5.268
Streptococcus mitis5.214
Haemophilus parainfluenzae4.601
Prevotella melaninogenica2.978
Streptococcus sp._HMT_0742.911
Porphyromonas pasteri2.586
Rothia mucilaginosa2.478
Neisseria perflava2.192
Sum:47.049
Saliva (SV)(all)
Species
% Abund
Haemophilus parainfluenzae4.948
Streptococcus salivarius4.919
Porphyromonas pasteri4.186
Streptococcus oralis4.040
Streptococcus infantis3.178
Prevotella melaninogenica2.859
Fusobacterium periodonticum2.809
Veillonella dispar2.577
Campylobacter concisus2.489
Streptococcus parasanguinis2.427
Sum:34.432
Throat (TH)(all)
Species
% Abund
Streptococcus salivarius8.636
Streptococcus oralis5.701
Prevotella melaninogenica3.473
Streptococcus parasanguinis3.123
Fusobacterium periodonticum3.000
Streptococcus infantis2.978
Haemophilus parainfluenzae2.683
Neisseria perflava2.518
Veillonella atypica2.472
Veillonella dispar2.218
Sum:36.802
Palatine Tonsils (PT)(all)
Species
% Abund
Streptococcus salivarius7.713
Streptococcus oralis5.625
Fusobacterium periodonticum3.533
Streptococcus parasanguinis3.241
Haemophilus parainfluenzae3.127
Streptococcus infantis2.927
Prevotella melaninogenica2.660
Fusobacterium nucleatum2.633
Neisseria perflava2.277
Porphyromonas pasteri2.248
Sum:35.984
Tongue Dorsum (TD)(all)
Species
% Abund
Streptococcus salivarius8.482
Haemophilus parainfluenzae5.740
Streptococcus parasanguinis4.452
Neisseria perflava4.400
Prevotella melaninogenica4.279
Fusobacterium periodonticum4.108
Streptococcus oralis3.361
Veillonella dispar3.149
Neisseria flavescens2.989
Porphyromonas pasteri2.658
Sum:43.618
Nasal (NS)(all)
Species
% Abund
Corynebacterium accolens30.408
Cutibacterium acnes18.660
Corynebacterium pseudodiphtheriticum10.558
Staphylococcus epidermidis10.203
Corynebacterium tuberculostearicum9.317
Corynebacterium propinquum5.847
Staphylococcus aureus4.563
Corynebacterium macginleyi2.901
Anaerococcus sp._HMT_2902.261
Anaerococcus octavius0.882
Sum:95.600