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Taxonomy: V4.1   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.02   |  Viruses: V1.1

Abundance by Habitat

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Rank Level: Phylum: List of the ten most abundant taxa at each oral site.
The abundance values are taken by averaging the available relative abundance data from the four studies:
Eren (2014) V1-V3 and V3-V5 HMP RefSeq (V1-V3 and V3-V5) Data and Dewhirst (unpublished)
Subgingival Plaque (oral)(all)
Phylum
% Abund
Bacillota23.837
Actinomycetota21.033
Bacteroidota20.333
Fusobacteriota15.295
Pseudomonadota13.694
Patescibacteria2.197
Spirochaetota2.029
Synergistota0.178
Mycoplasmatota0.016
Chloroflexota0.003
Sum:98.615
Supragingival Plaque (oral)(all)
Phylum
% Abund
Bacillota26.204
Actinomycetota25.326
Pseudomonadota17.128
Bacteroidota16.058
Fusobacteriota11.661
Patescibacteria1.600
Spirochaetota0.484
Synergistota0.016
Mycoplasmatota0.010
Cyanobacteriota0.000
Sum:98.487
Attached Keratinized Gingiva (oral)(all)
Phylum
% Abund
Bacillota59.398
Pseudomonadota20.551
Bacteroidota12.349
Fusobacteriota3.184
Actinomycetota3.042
Patescibacteria0.271
Spirochaetota0.009
Synergistota0.001
Mycoplasmatota0.001
Cyanobacteriota0.000
Sum:98.806
Buccal Mucosa (oral)(all)
Phylum
% Abund
Bacillota62.153
Pseudomonadota16.922
Bacteroidota8.271
Actinomycetota7.199
Fusobacteriota4.066
Patescibacteria0.269
Spirochaetota0.059
Synergistota0.006
Mycoplasmatota0.003
Cyanobacteriota0.000
Sum:98.948
Hard Palate (oral)(all)
Phylum
% Abund
Bacillota56.740
Pseudomonadota15.572
Bacteroidota12.758
Actinomycetota8.762
Fusobacteriota4.806
Patescibacteria0.392
Spirochaetota0.028
Synergistota0.002
Mycoplasmatota0.002
Cyanobacteriota0.000
Sum:99.062
Saliva (oral)(all)
Phylum
% Abund
Bacillota42.952
Bacteroidota20.811
Pseudomonadota17.740
Actinomycetota5.982
Fusobacteriota5.981
Patescibacteria4.908
Spirochaetota0.207
Mycoplasmatota0.028
Synergistota0.001
Cyanobacteriota0.000
Sum:98.610
Throat (oral)(all)
Phylum
% Abund
Bacillota45.981
Bacteroidota18.634
Pseudomonadota14.118
Fusobacteriota10.598
Actinomycetota8.553
Patescibacteria1.067
Spirochaetota0.162
Mycoplasmatota0.009
Synergistota0.008
Cyanobacteriota0.000
Sum:99.130
Palatine Tonsils (oral)(all)
Phylum
% Abund
Bacillota43.480
Bacteroidota20.212
Pseudomonadota13.444
Fusobacteriota13.384
Actinomycetota6.642
Patescibacteria1.078
Spirochaetota0.666
Mycoplasmatota0.073
Synergistota0.036
Cyanobacteriota0.000
Sum:99.015
Tongue Dorsum (oral)(all)
Phylum
% Abund
Bacillota42.548
Pseudomonadota17.947
Bacteroidota15.260
Actinomycetota11.956
Fusobacteriota9.568
Patescibacteria0.940
Spirochaetota0.039
Mycoplasmatota0.001
Cyanobacteriota0.000
Synergistota0.000
Sum:98.259
Anterior Nares (nasal)(all)
Phylum
% Abund
Actinomycetota71.655
Bacillota20.179
Pseudomonadota5.639
Bacteroidota0.273
Fusobacteriota0.147
Patescibacteria0.009
Spirochaetota0.000
Cyanobacteriota0.000
Synergistota0.000
Chloroflexota0.000
Sum:97.902
L_Retroauricular Crease (skin)(all)
Phylum
% Abund
Actinomycetota74.657
Bacillota17.125
Pseudomonadota3.716
Bacteroidota0.725
Fusobacteriota0.663
Patescibacteria0.025
Spirochaetota0.000
Cyanobacteriota0.000
Synergistota0.000
Chloroflexota0.000
Sum:96.911
R_Retroauricular Crease (skin)(all)
Phylum
% Abund
Actinomycetota74.097
Bacillota17.470
Pseudomonadota4.649
Fusobacteriota0.487
Bacteroidota0.448
Patescibacteria0.014
Spirochaetota0.000
Cyanobacteriota0.000
Synergistota0.000
Chloroflexota0.000
Sum:97.165
L_Antecubital Fossa (skin)(all)
Phylum
% Abund
Actinomycetota52.483
Bacillota15.069
Pseudomonadota9.448
Bacteroidota1.635
Fusobacteriota1.622
Patescibacteria0.070
Spirochaetota0.000
Cyanobacteriota0.000
Synergistota0.000
Chloroflexota0.000
Sum:80.327
R_Antecubital Fossa (skin)(all)
Phylum
% Abund
Actinomycetota56.010
Bacillota16.110
Pseudomonadota9.462
Fusobacteriota1.567
Bacteroidota1.378
Patescibacteria0.033
Spirochaetota0.005
Synergistota0.003
Cyanobacteriota0.000
Chloroflexota0.000
Sum:84.568
Vaginal Introitus (vaginal)(all)
Phylum
% Abund
Bacillota85.972
Actinomycetota3.659
Bacteroidota0.946
Pseudomonadota0.886
Fusobacteriota0.655
Spirochaetota0.000
Cyanobacteriota0.000
Patescibacteria0.000
Synergistota0.000
Chloroflexota0.000
Sum:92.118
Mid Vagina (vaginal)(all)
Phylum
% Abund
Bacillota90.449
Actinomycetota3.608
Bacteroidota0.580
Pseudomonadota0.569
Fusobacteriota0.534
Synergistota0.114
Mycoplasmatota0.006
Spirochaetota0.000
Cyanobacteriota0.000
Patescibacteria0.000
Sum:95.860
Posterior Fornix (vaginal)(all)
Phylum
% Abund
Bacillota91.775
Actinomycetota3.579
Fusobacteriota0.600
Bacteroidota0.589
Pseudomonadota0.059
Synergistota0.005
Spirochaetota0.000
Cyanobacteriota0.000
Patescibacteria0.000
Chloroflexota0.000
Sum:96.607
Stool (gut)(all)
Phylum
% Abund
Bacillota7.506
Actinomycetota0.745
Pseudomonadota0.057
Fusobacteriota0.013
Bacteroidota0.010
Patescibacteria0.002
Spirochaetota0.000
Cyanobacteriota0.000
Synergistota0.000
Chloroflexota0.000
Sum:8.333