Species: Treponema sp._HMT_951
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BM - Buccal Mucosa
KG - Keratinized Gingiva
HP - Hard Palate
TD - Tongue Dorsum
PT - Palatine Tonsils
TH - Throat
SV - Saliva
SupP - Supra-gingival Plaque
SubP - Sub-gingival Plaque
NS - Nasal
ST - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.021 | 0.011 | 0.000 | 0.000 | 0.001 | 0.006 | 0.000 | 0.006 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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Stdev | 0.107 | 0.065 | 0.000 | 0.004 | 0.008 | 0.039 | 0.003 | 0.046 | 0.000 | 0.000 |
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Prev | 7.792 | 3.896 | 0.000 | 1.299 | 2.597 | 5.195 | 1.299 | 2.597 | 0.000 | 0.000 |
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Notes:
Reads equally close to T. sp. HMT 517 and 951 were assigned half to each taxon.
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | ST |
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Avg | 0.017 | 0.004 | 0.000 | 0.001 | 0.000 | 0.001 | 0.005 | 0.003 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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Stdev | 0.076 | 0.019 | 0.000 | 0.007 | 0.004 | 0.008 | 0.052 | 0.014 | 0.002 | 0.000 |
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Prev | 9.459 | 6.081 | 0.000 | 3.378 | 1.351 | 4.730 | 4.730 | 7.432 | 0.676 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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No Notes
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percent abundance
| SubP | SupP | KG | BM | HP | SV | TH | PT | TD | NS |
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Avg | 0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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Stdev | 0.007 | 0.002 | 0.000 | 0.002 | 0.000 | 0.000 | 0.001 | 0.000 | 0.000 | 0.000 |
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Prev | 5.714 | 2.941 | 0.000 | 5.882 | 0.000 | 0.000 | 3.030 | 0.000 | 0.000 | 0.000 |
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