HOMD ::species::Treponema sp._HMT_237

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Treponema sp._HMT_237

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Full Lineage: Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Treponemataceae; Treponema; Treponema sp._HMT_237

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.168	0.043	0.000	0.003	0.001	0.016	0.006	0.052	0.002	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.574	0.022	0.000	0.005	0.000	0.044	0.004	0.071	0.000	0.000
Stdev	0.427	0.161	0.003	0.013	0.007	0.066	0.034	0.224	0.009	0.000
Prev	28.571	12.987	1.299	10.390	3.896	15.584	10.390	19.481	5.195	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to T. medium and T. sp. HMT 226, 230, 235, and 237 were assigned one-fifth to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.122	0.037	0.001	0.005	0.002	0.016	0.007	0.027	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.374	0.064	0.000	0.016	0.006	0.044	0.013	0.070	0.000	0.000
Stdev	0.307	0.117	0.004	0.017	0.006	0.032	0.024	0.082	0.005	0.000
Prev	50.676	35.135	3.378	22.973	14.865	45.946	27.027	39.189	6.081	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.186	0.007	0.001	0.024	0.005	0.002	0.005	0.033	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.246	0.019	0.001	0.028	0.009	0.008	0.006	0.067	0.000	0.000
Stdev	0.890	0.017	0.007	0.091	0.015	0.004	0.019	0.100	0.001	0.000
Prev	48.571	29.412	16.667	29.412	25.000	13.889	24.242	29.032	11.765	0.000