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Taxonomy: V4.0   |  16S rRNA RefSeq: V16.02   |  Genomic RefSeq: V11.01
Species: Haemophilus parainfluenzae (HMT-718)
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Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus parainfluenzae
Oral:
SUBP-- Subgingival Plaque SUPP -- Supragingival Plaque PERIO -- Periodontal AKE -- Attached Keratinized Gingiva BMU -- Buccal Mucosa
HPA -- Hard Palate SAL -- Saliva THR -- Throat PTO -- Palatine Tonsils TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease RRC -- R_Retroauricular Crease LAF -- L_Antecubital Fossa RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus MVA -- Mid Vagina PFO -- Posterior Fornix
Gut:
STO -- Stool
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0.7571.3073.4222.4821.5102.0531.0041.1581.8540.0490.0220.0230.0480.2550.0000.0000.0000.000
10thp0.0000.0110.0350.0800.0740.0220.0460.0210.0290.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp1.7272.54511.4825.4243.7415.3612.7763.2145.1640.1190.0400.0230.1610.2430.0000.0000.0000.000
Stdev1.6533.8945.5083.4771.9823.7161.3181.9153.5540.2260.0920.1600.1261.6910.0000.0000.0000.000
Prev(%)86.75591.39195.10597.26095.97390.76996.42993.33396.12943.00026.43721.53040.80539.6310.0000.0000.0000.000

HMP 16S RefSeq (V3-V5) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)4.8828.31222.77024.01114.95812.1327.7829.03413.8250.5831.2461.5802.5243.0780.0000.0000.0000.099
10thp0.2130.4761.4295.0254.7853.0420.7460.9391.2820.0000.0000.0000.0000.0000.0000.0000.0000.000
90thp13.09419.28653.88450.48827.78223.69719.64120.70530.1231.4880.9910.8963.9056.3140.0000.0000.0000.201
Stdev6.2499.62621.74618.27710.1148.6088.0168.70911.6571.3435.3646.6498.3578.6700.0000.0000.0000.321
Prev(%)99.01299.75699.50699.752100.00099.70299.37799.270100.00073.18057.64353.08680.69077.3330.0000.0000.00045.012

Dewhirst (35x9) (not published)
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)1.5412.0718.0657.7705.4724.2612.5922.0225.2550.008
10thp0.0110.0340.3011.1140.9100.1840.1880.0820.2490.000
90thp2.7897.19222.30517.42511.61410.2716.1465.80915.8240.020
Stdev3.8823.3999.5909.0624.9444.1384.4812.3786.6010.025
Prev(%)93.243100.000100.000100.000100.00098.000100.000100.000100.00015.000

HMP Metaphlan (not published)
No Notes
SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)2.5633.2020.0779.24910.0112.9205.1301.4443.5375.1720.1850.0460.0170.0000.0340.1420.0860.038
10thp0.2300.1600.0000.5741.4152.9202.5510.0000.2320.4900.0000.0000.0000.0000.0000.0000.0000.000
90thp3.8287.8250.05722.49224.8852.92010.8933.3557.76612.1250.3780.0920.0300.0000.0000.4970.0400.061
Stdev5.8474.4170.2559.14710.7430.0003.7571.5404.4145.2270.6390.1160.0570.0000.1120.3510.6290.308
Prev(%)100.00099.24237.50094.11898.936100.000100.00081.250100.00099.29625.67641.66721.8750.0009.09121.42914.14124.909

Eren V1-V3 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)1.0752.1313.4602.4701.7252.4711.3281.5832.5790.011
10thp0.0000.0000.0450.0780.2100.1580.0180.0330.0220.000
90thp2.7153.9748.6555.5414.1998.0193.5943.6097.5800.050
Stdev2.1695.7395.2863.9082.7503.6651.8872.8414.5280.032
Prev(%)80.51988.31294.80596.10498.70194.80592.20892.20893.50618.182

Eren V3-V5 www.pnas.org
No Notes
SUBPSUPPAKEBMUHPASALTHRPTOTDOSTO
Avg (%)2.9914.9288.7357.6456.6078.1134.1285.7779.3850.054
10thp0.1490.3470.3271.5111.6012.7060.5560.6571.2360.000
90thp6.27512.42521.47818.41112.34315.3728.40712.53720.6550.154
Stdev4.0705.6778.5747.6285.3305.4253.4595.2747.1370.200
Prev(%)97.29799.324100.000100.000100.000100.000100.000100.000100.00030.070