Species: Escherichia coli (HMT-574)
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
HMP 16S RefSeq (V1-V3) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.033 | 0.000 | 0.000 | 0.000 | 0.028 | 0.000 | 0.000 | 0.027 | 0.026 | 0.000 | 0.000 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.017 | 0.000 | 0.000 | 0.000 | 0.029 | 0.000 | 0.000 | 0.045 | 0.074 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.270 | 0.000 | 0.000 | 0.000 | 0.144 | 0.000 | 0.000 | 0.107 | 0.074 | 0.000 | 0.000 | 0.000 | 0.000 |
| Prev(%) | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 13.077 | 0.000 | 0.000 | 0.000 | 16.000 | 0.000 | 0.000 | 18.966 | 23.963 | 0.000 | 0.000 | 0.000 | 0.000 |
HMP 16S RefSeq (V3-V5) (not published)
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Notes:
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
No data – the v3v5 region of the 16S rRNA gene does not distinguish this species from its close relatives.
Dewhirst (35x9) (not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.001 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.035 | 0.000 | 0.000 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| Stdev | 0.004 | 0.002 | 0.001 | 0.002 | 0.001 | 0.000 | 0.001 | 0.192 | 0.000 | 0.000 |
| Prev(%) | 6.757 | 2.941 | 4.651 | 8.571 | 7.143 | 0.000 | 3.030 | 6.452 | 2.500 | 0.000 |
HMP Metaphlan (not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Avg (%) | 0.080 | 0.001 | 0.000 | 0.021 | 0.003 | 0.000 | 0.006 | 1.324 | 0.041 | 0.037 | 0.554 | 0.000 | 0.000 | 12.490 | 0.005 | 0.539 | 0.156 | 0.204 |
| 10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 12.490 | 0.000 | 0.000 | 0.000 | 0.000 |
| 90thp | 0.119 | 0.000 | 0.000 | 0.092 | 0.000 | 0.000 | 0.015 | 2.630 | 0.094 | 0.000 | 0.000 | 0.000 | 0.000 | 12.490 | 0.020 | 0.409 | 0.003 | 0.080 |
| Stdev | 0.264 | 0.015 | 0.000 | 0.044 | 0.022 | 0.000 | 0.018 | 3.821 | 0.120 | 0.736 | 5.951 | 0.000 | 0.000 | 0.000 | 0.013 | 1.802 | 1.012 | 4.064 |
| Prev(%) | 29.167 | 2.273 | 0.000 | 23.529 | 2.926 | 0.000 | 12.500 | 37.500 | 28.000 | 2.582 | 7.207 | 0.000 | 0.000 | 100.000 | 18.182 | 42.857 | 10.101 | 26.182 |
Eren V1-V3 www.pnas.org
No Notes
Eren V3-V5 www.pnas.org
No Notes
