HOMD ::genus::Lachnoanaerobaculum

Genus: Lachnoanaerobaculum

Each rank name is a link to abundance plots at that rank:
Full Lineage: Bacteria; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoanaerobaculum
Lower rank member(s): show[+]

LINKS: Ecology Home | Life Page: Lachnoanaerobaculum

Oral:	SUBP-- Subgingival Plaque	SUPP -- Supragingival Plaque	PERIO -- Periodontal	AKE -- Attached Keratinized Gingiva	BMU -- Buccal Mucosa
Oral:	HPA -- Hard Palate	SAL -- Saliva	THR -- Throat	PTO -- Palatine Tonsils	TDO -- Tongue Dorsum
Nasal:	ANA -- Anterior Nares
Skin:	LRC -- L_Retroauricular Crease	RRC -- R_Retroauricular Crease	LAF -- L_Antecubital Fossa	RAF -- R_Antecubital Fossa
Vaginal:	VIN -- Vaginal Introitus	MVA -- Mid Vagina	PFO -- Posterior Fornix
Gut:	STO -- Stool

Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

HMP 16S RefSeq (V1-V3) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.208	0.197	0.093	0.181	0.409	0.262	0.929	0.775	0.788	0.000	0.012	0.008	0.030	0.056	0.000	0.000	0.000	0.000
10^thp	0.000	0.000	0.000	0.000	0.013	0.000	0.126	0.111	0.111	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.571	0.560	0.202	0.438	0.865	0.638	1.988	1.654	2.075	0.000	0.017	0.000	0.028	0.087	0.000	0.000	0.000	0.000
Stdev	0.339	0.314	0.290	0.258	0.473	0.282	0.917	0.688	0.821	0.000	0.062	0.066	0.138	0.243	0.000	0.000	0.000	0.000
Prev(%)	78.808	81.457	59.441	84.932	91.275	84.615	94.345	97.333	99.355	0.000	15.230	7.932	13.218	17.972	0.000	0.000	0.000	0.000

HMP 16S RefSeq (V3-V5) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.436	0.477	0.198	0.467	1.000	0.596	1.852	1.661	1.744	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.006
10^thp	0.000	0.000	0.000	0.000	0.147	0.129	0.222	0.296	0.337	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.130	1.326	0.419	1.160	2.098	1.114	4.065	3.594	3.647	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.563	0.626	0.525	0.545	0.889	0.434	1.771	1.416	1.590	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.082
Prev(%)	88.642	87.317	54.815	89.082	95.652	95.536	94.704	99.757	99.513	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	3.406

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.079	0.138	0.065	0.096	0.135	0.133	0.272	0.255	0.230	0.000
10^thp	0.000	0.009	0.000	0.003	0.003	0.003	0.032	0.015	0.002	0.000
90^thp	0.215	0.285	0.190	0.293	0.291	0.371	0.540	0.531	0.589	0.000
Stdev	0.128	0.213	0.103	0.149	0.171	0.166	0.304	0.271	0.259	0.000
Prev(%)	81.081	97.059	88.372	91.429	89.286	92.000	100.000	100.000	90.000	0.000

HMP Metaphlan (not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.180	0.243	0.176	0.086	0.119	0.140	0.133	0.433	0.632	0.791	0.016	0.000	0.000	0.000	0.002	0.111	0.002	0.003
10^thp	0.000	0.000	0.000	0.000	0.000	0.140	0.040	0.000	0.048	0.180	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.465	0.640	0.511	0.252	0.390	0.140	0.239	1.240	1.364	1.495	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
Stdev	0.183	0.347	0.311	0.177	0.244	0.000	0.098	0.484	0.575	0.634	0.190	0.000	0.000	0.000	0.006	0.414	0.017	0.048
Prev(%)	75.000	75.758	62.500	52.941	52.660	100.000	100.000	62.500	92.000	98.826	0.901	0.000	0.000	0.000	9.091	7.143	1.010	0.909

Eren V1-V3 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.295	0.303	0.043	0.175	0.334	0.284	1.137	0.813	0.792	0.003
10^thp	0.000	0.000	0.000	0.000	0.032	0.000	0.088	0.123	0.140	0.000
90^thp	0.872	0.957	0.107	0.480	0.709	0.663	2.416	1.629	1.468	0.000
Stdev	0.428	0.524	0.109	0.213	0.310	0.274	1.331	0.748	0.888	0.012
Prev(%)	77.922	68.831	46.753	84.416	92.208	84.416	93.506	97.403	98.701	9.091

Eren V3-V5 www.pnas.org

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.435	0.489	0.090	0.230	0.531	0.483	1.207	1.004	1.113	0.000
10^thp	0.000	0.000	0.000	0.000	0.068	0.128	0.188	0.168	0.168	0.000
90^thp	1.125	1.435	0.196	0.593	1.177	0.906	2.825	2.106	2.448	0.000
Stdev	0.651	0.636	0.288	0.252	0.536	0.380	1.419	0.827	1.103	0.000
Prev(%)	83.784	86.486	45.270	87.838	95.946	96.622	98.649	97.973	98.649	0.000

[Species:Lachnoanaerobaculum gingivalis]	[Species:Lachnoanaerobaculum orale]	[Species:Lachnoanaerobaculum saburreum]	[Species:Lachnoanaerobaculum sp. HMT-083]	[Species:Lachnoanaerobaculum sp. HMT-089]
[Species:Lachnoanaerobaculum sp. HMT-430]	[Species:Lachnoanaerobaculum sp. HMT-441]	[Species:Lachnoanaerobaculum sp. HMT-496]	[Species:Lachnoanaerobaculum umeaense]

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