HOMD ::Family:Propionibacteriaceae

Family: Propionibacteriaceae

Full Lineage: Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales; Propionibacteriaceae Each rank name is a link to abundance plots at that rank:

Lower rank member(s): [Genus:Arachnia] [Genus:Brooklawnia] [Genus:Cutibacterium] [Genus:Propionibacteriaceae [G1]] [Genus:Propionibacterium]

LINKS: Ecology Home | Life Page: Propionibacteriaceae

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

Show Legend

Eren V1-V3 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.740	0.909	0.023	0.072	0.048	0.223	0.048	0.031	0.010	0.002
10^thp	0.008	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.005	2.825	0.064	0.108	0.135	0.383	0.203	0.081	0.034	0.000
Stdev	0.965	1.487	0.055	0.190	0.068	0.807	0.100	0.086	0.026	0.012
Prev(%)	89.610	87.013	35.065	63.636	55.844	63.636	37.662	31.169	20.779	5.195

Eren V3-V5 www.pnas.org (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.590	0.645	0.023	0.033	0.056	0.113	0.053	0.019	0.008	0.003
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.724	1.555	0.032	0.086	0.105	0.161	0.126	0.064	0.004	0.000
Stdev	0.891	1.184	0.124	0.071	0.159	0.632	0.134	0.045	0.053	0.021
Prev(%)	86.486	87.162	17.568	44.595	53.378	53.378	43.243	29.730	10.811	4.895

Human Microbiome Project 16S RefSeq (V1-V3) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.083	0.889	0.062	0.292	0.169	0.604	0.226	0.034	0.015	23.564	61.877	62.973	41.907	43.875	0.000	0.046	0.000	0.000
10^thp	0.024	0.014	0.000	0.000	0.000	0.000	0.000	0.000	0.000	6.702	12.410	17.542	6.371	6.305	0.000	0.000	0.000	0.000
90^thp	2.891	2.253	0.100	0.218	0.244	0.609	0.286	0.053	0.032	45.626	94.409	94.975	78.751	82.503	0.000	0.147	0.000	0.000
Stdev	1.812	1.422	0.253	1.657	0.631	3.196	1.013	0.152	0.064	16.103	29.737	28.839	26.648	27.712	0.000	0.094	0.000	0.000
Prev(%)	94.040	92.715	41.259	56.164	53.691	60.769	43.155	27.333	23.226	99.000	100.000	100.000	99.425	100.000	0.000	56.757	0.000	0.000

Human Microbiome Project 16S RefSeq (V3-V5) (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.914	1.533	0.976	1.111	1.144	0.983	1.024	0.232	0.963	29.491	68.215	67.159	42.534	45.180	0.519	0.509	0.657	0.600
10^thp	0.027	0.020	0.000	0.000	0.000	0.000	0.000	0.000	0.000	6.007	5.154	8.766	1.709	1.709	0.000	0.000	0.000	0.000
90^thp	2.444	2.511	0.259	0.265	0.319	0.230	0.604	0.047	0.017	57.233	98.214	98.084	87.566	85.903	0.076	0.066	0.026	0.000
Stdev	8.771	7.372	7.771	8.868	8.409	7.844	6.766	2.310	8.594	20.047	34.200	33.968	30.780	31.999	6.397	6.424	6.851	6.656
Prev(%)	95.802	92.439	33.827	48.883	52.430	51.488	44.237	22.871	12.652	100.000	100.000	99.691	97.931	99.333	39.080	39.344	23.560	8.516

Dewhirst (35x9) (not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.501	0.419	0.050	0.022	0.046	0.008	0.018	0.021	0.003	19.031
10^thp	0.002	0.001	0.000	0.000	0.000	0.000	0.000	0.000	0.000	3.392
90^thp	1.329	1.127	0.027	0.052	0.151	0.026	0.052	0.009	0.006	47.151
Stdev	1.050	0.840	0.249	0.024	0.078	0.011	0.038	0.095	0.008	21.650
Prev(%)	90.541	88.235	65.116	82.857	75.000	66.000	57.576	51.613	30.000	100.000

Human Microbiome Project Metaphlan (not published) (data from healthy subjects)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	3.568	1.918	1.135	0.246	0.177	0.000	0.021	0.003	0.000	0.110	25.555	67.398	72.920	31.830	0.001	0.079	0.045	0.001
10^thp	0.009	0.030	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	3.274	15.539	40.842	31.830	0.000	0.000	0.000	0.000
90^thp	9.040	4.685	1.365	0.560	0.220	0.000	0.060	0.000	0.000	0.000	52.388	91.379	95.409	31.830	0.000	0.221	0.006	0.000
Stdev	5.177	3.090	3.404	0.708	1.974	0.000	0.045	0.013	0.000	1.628	19.359	29.854	28.202	0.000	0.003	0.205	0.246	0.010
Prev(%)	87.500	94.192	79.167	35.294	37.500	0.000	37.500	6.250	0.000	6.808	95.495	100.000	100.000	100.000	9.091	28.571	10.101	1.818

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