Species: Streptococcus vestibularis
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BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
reads equally close to S. salivarius and S. vestibularis were assigned to S.salivarius, except for oligotypes V1V3_291 and V1V3_333 which were assigned to S. vestibularis
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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Avg | 0.004 | 0.003 | 0.168 | 0.133 | 0.159 | 0.019 | 0.038 | 0.067 | 0.074 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.000 | 0.000 | 0.562 | 0.217 | 0.209 | 0.069 | 0.126 | 0.182 | 0.176 | 0.000 |
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Stdev | 0.017 | 0.010 | 0.503 | 0.425 | 0.580 | 0.038 | 0.058 | 0.129 | 0.137 | 0.000 |
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Prev | 9.091 | 9.091 | 36.364 | 66.234 | 67.532 | 29.870 | 45.455 | 58.442 | 74.026 | 0.000 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to S. salivarius and S. vestibularis were assigned to S. salivarius.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | ANA |
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Avg | 0.041 | 0.032 | 0.529 | 0.261 | 0.252 | 0.038 | 0.037 | 0.018 | 0.013 | 0.000 |
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10thp | 0.000 | 0.000 | 0.000 | 0.003 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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90thp | 0.047 | 0.030 | 1.821 | 0.594 | 0.630 | 0.116 | 0.068 | 0.052 | 0.037 | 0.000 |
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Stdev | 0.142 | 0.117 | 1.413 | 0.630 | 0.725 | 0.076 | 0.071 | 0.023 | 0.021 | 0.000 |
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Prev | 47.297 | 47.059 | 67.442 | 91.429 | 82.143 | 74.000 | 84.848 | 83.871 | 70.000 | 0.000 |
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