Species: Streptococcus salivarius
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BMU - Buccal Mucosa
AKE - Keratinized Gingiva
HPA - Hard Palate
TDO - Tongue Dorsum
PTO - Palatine Tonsils
THR - Throat
SAL - Saliva
SUPP - Supra-gingival Plaque
SUBP - Sub-gingival Plaque
ANA - Nasal
STO - Stool
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
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Notes:
reads equally close to S. salivarius and S. vestibularis were assigned to S.salivarius, except for oligotypes V1V3_291 and V1V3_333 which were assigned to S. vestibularis
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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| Avg | 0.142 | 0.089 | 4.164 | 2.753 | 6.962 | 2.943 | 7.953 | 7.864 | 8.944 | 0.017 |
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| 10thp | 0.000 | 0.000 | 0.000 | 0.100 | 0.531 | 0.269 | 0.631 | 0.661 | 0.987 | 0.000 |
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| 90thp | 0.200 | 0.176 | 12.098 | 6.186 | 18.603 | 7.568 | 19.212 | 15.792 | 20.218 | 0.052 |
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| Stdev | 0.607 | 0.207 | 11.092 | 5.269 | 8.264 | 3.174 | 8.235 | 8.315 | 8.324 | 0.042 |
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| Prev | 54.545 | 58.442 | 76.623 | 94.805 | 100.000 | 94.805 | 98.701 | 98.701 | 98.701 | 24.675 |
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Notes:
Reads equally close to S. salivarius, S. thermophilus, and S. vestibularis were assigned to S. salivarius.
Reads equally close to S. salivarius, S. thermophilus, S. vestibularis, and S. anginosus were assigned half to S. salivarius and half to S. anginosus.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | STO |
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| Avg | 0.117 | 0.069 | 2.494 | 2.493 | 6.986 | 2.937 | 6.725 | 6.045 | 8.527 | 0.013 |
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| 10thp | 0.000 | 0.000 | 0.000 | 0.069 | 0.517 | 0.239 | 0.447 | 0.345 | 0.550 | 0.000 |
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| 90thp | 0.202 | 0.188 | 5.613 | 6.316 | 18.004 | 7.123 | 16.566 | 12.896 | 21.850 | 0.040 |
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| Stdev | 0.507 | 0.140 | 7.990 | 4.513 | 8.430 | 3.622 | 6.849 | 7.459 | 8.792 | 0.030 |
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| Prev | 43.919 | 50.000 | 74.324 | 95.270 | 98.649 | 98.649 | 98.649 | 97.973 | 98.649 | 26.573 |
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From: Dewhirst 35x9 data (not published yet)
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Notes:
Reads equally close to S. salivarius and S. vestibularis were assigned to S. salivarius.
Reads equally close to S. thermophilus and S. salivarius were assigned to S. salivarius.
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percent abundance
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | ANA |
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| Avg | 0.534 | 0.753 | 5.168 | 4.966 | 10.861 | 8.877 | 11.229 | 9.229 | 7.976 | 0.019 |
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| 10thp | 0.011 | 0.009 | 0.028 | 0.237 | 1.000 | 0.110 | 0.929 | 0.732 | 0.126 | 0.000 |
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| 90thp | 1.264 | 0.870 | 15.235 | 11.465 | 25.906 | 24.976 | 24.783 | 21.633 | 21.726 | 0.042 |
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| Stdev | 1.380 | 2.667 | 10.869 | 6.590 | 10.119 | 11.032 | 9.608 | 8.521 | 9.013 | 0.053 |
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| Prev | 95.946 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 100.000 | 20.000 |
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