HOMD ::species::Streptococcus intermedius

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Streptococcus intermedius

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Full Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus intermedius

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.405	0.099	0.057	0.022	0.011	0.033	0.119	0.051	0.004	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.306	0.252	0.025	0.052	0.048	0.079	0.053	0.040	0.015	0.000
Stdev	0.511	0.160	0.317	0.049	0.024	0.072	0.565	0.290	0.011	0.002
Prev	83.117	61.039	15.584	44.156	23.377	40.260	25.974	23.377	14.286	1.299

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to S. constellatus and S. intermedius were assigned to S. intermedius.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.657	0.175	0.040	0.037	0.033	0.050	0.067	0.257	0.007	0.000
10^thp	0.027	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	1.500	0.411	0.031	0.110	0.099	0.111	0.123	0.498	0.031	0.000
Stdev	0.861	0.298	0.247	0.077	0.067	0.123	0.274	0.753	0.019	0.001
Prev	91.216	81.081	17.568	47.973	45.270	53.378	39.189	60.811	19.595	1.399

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 576 and 644 were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.982	0.569	0.159	0.105	0.304	0.032	0.054	0.178	0.012	0.003
10^thp	0.002	0.016	0.000	0.002	0.004	0.003	0.000	0.000	0.000	0.000
90^thp	2.686	1.444	0.357	0.294	0.757	0.086	0.171	0.881	0.026	0.002
Stdev	1.663	0.839	0.433	0.160	0.754	0.041	0.103	0.427	0.018	0.008
Prev	94.595	100.000	86.047	91.429	92.857	96.000	87.879	83.871	80.000	10.000