HOMD ::species::Campylobacter concisus

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Campylobacter concisus

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Full Lineage: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter concisus

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.386	0.531	1.194	0.414	0.963	6.292	3.296	2.996	2.938	0.001
10^thp	0.000	0.000	0.000	0.000	0.177	0.980	0.327	0.419	0.356	0.000
90^thp	1.076	1.448	2.652	1.222	2.031	12.760	7.970	6.616	6.294	0.000
Stdev	0.495	1.082	3.664	0.548	0.902	5.233	3.172	3.135	2.737	0.006
Prev	84.416	81.818	66.234	85.714	98.701	97.403	98.701	100.000	98.701	3.896

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to C. curvus and C. concisus were assigned half to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.079	0.108	0.190	0.083	0.158	1.014	0.405	0.359	0.362	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.225	0.340	0.453	0.199	0.424	2.851	1.150	0.995	0.798	0.000
Stdev	0.140	0.196	0.596	0.148	0.206	1.265	0.522	0.515	0.521	0.001
Prev	62.838	66.216	44.595	62.838	76.351	83.784	81.081	79.054	77.027	1.399

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.239	0.100	0.088	0.139	0.226	0.162	0.561	0.421	0.233	0.000
10^thp	0.000	0.003	0.002	0.000	0.028	0.019	0.116	0.015	0.007	0.000
90^thp	0.535	0.176	0.295	0.333	0.542	0.242	1.017	1.139	0.474	0.000
Stdev	0.721	0.175	0.132	0.253	0.195	0.285	0.792	0.396	0.307	0.000
Prev	83.784	91.176	90.698	85.714	100.000	96.000	100.000	96.774	95.000	0.000