Genome Explorer: Limosilactobacillus fermentum MTCC 5898 (SEQF9232.1)
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NCBI Annotation for SEQF9232.1
| Genome selected: Limosilactobacillus fermentum MTCC 5898 | |||
| Contigs: | 1 | Bases: | 2098685 bps |
| CDS: | 168 | rRNA: | 15 |
| tmRNA: | 1 | tRNA: | 57 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1501 | CP035904.1 | QBE61337.1 JB | 879 [NA] | 292 [AA] | 2083139-2084017 | EWF21_09220 | hydroxyacid dehydrogenase |
| 1502 | CP035904.1 | QBE61338.1 JB | 612 [NA] | 203 [AA] | 2084212-2084823 | EWF21_09225 | signal peptidase I |
| 1503 | CP035904.1 | QBE61339.1 JB | 1557 [NA] | 518 [AA] | 2084898-2086454 | EWF21_09230 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase |
| 1504 | CP035904.1 | QBE61340.1 JB | 1536 [NA] | 511 [AA] | 2086459-2087994 | EWF21_09235 | UDP-N-acetylmuramyl-tripeptide synthetase |
| 1505 | CP035904.1 | QBE61341.1 JB | 1911 [NA] | 636 [AA] | 2087994-2089904 | EWF21_09240 | asparagine synthase (glutamine-hydrolyzing) |
| 1506 | CP035904.1 | QBE61342.1 JB | 378 [NA] | 125 [AA] | 2091743-2092120 | EWF21_09250 | large-conductance mechanosensitive channel protein MscL |
| 1507 | CP035904.1 | QBE61343.1 JB | 1905 [NA] | 634 [AA] | 2092380-2094284 | EWF21_09255 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG |
| 1508 | CP035904.1 | QBE61344.1 JB | 1389 [NA] | 462 [AA] | 2094299-2095687 | EWF21_09260 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE |
| 1509 | CP035904.1 | QBE61345.1 JB | 861 [NA] | 286 [AA] | 2095833-2096693 | EWF21_09265 | RNA-binding protein |
| 1510 | CP035904.1 | QBE61346.1 JB | 834 [NA] | 277 [AA] | 2096724-2097557 | EWF21_09270 | membrane protein insertase YidC |
| 1511 | CP035904.1 | QBE61347.1 JB | 345 [NA] | 114 [AA] | 2097573-2097917 | EWF21_09275 | ribonuclease P protein component |
| 1512 | CP035904.1 | QBE61348.1 JB | 135 [NA] | 44 [AA] | 2098033-2098167 | EWF21_09280 | 50S ribosomal protein L34 |
| 1513 | CP035904.1 | QBE61349.1 JB | 363 [NA] | 120 [AA] | 2098241-2098603 | EWF21_09285 | hypothetical protein |
| 1514 | CP035904.1 | QBE61350.1 JB | 495 [NA] | 164 [AA] | 51982->52478 | EWF21_00205 | ABC transporter permease |
| 1515 | CP035904.1 | QBE61351.1 JB | 540 [NA] | 179 [AA] | 59048-59587 | EWF21_00225 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR |
| 1516 | CP035904.1 | QBE61352.1 JB | 738 [NA] | 245 [AA] | 99815-100552 | EWF21_00395 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG |
| 1517 | CP035904.1 | QBE61353.1 JB | 81 [NA] | 26 [AA] | 125585->125666 | EWF21_00475 | transposase |
| 1518 | CP035904.1 | QBE61354.1 JB | 690 [NA] | 229 [AA] | 131528-132217 | EWF21_00485 | response regulator transcription factor |
| 1519 | CP035904.1 | QBE61355.1 JB | 1661 [NA] | 553 [AA] | 140569->142229 | EWF21_00530 | formate--tetrahydrofolate ligase |
| 1520 | CP035904.1 | QBE61356.1 JB | 563 [NA] | 188 [AA] | 175959->176521 | EWF21_00685 | hypothetical protein |
| 1521 | CP035904.1 | QBE61357.1 JB | 181 [NA] | 60 [AA] | <177170-177350 | EWF21_00690 | transcriptional regulator |
| 1522 | CP035904.1 | QBE61358.1 JB | 285 [NA] | 94 [AA] | 177369-177653 | EWF21_00695 | LysR family transcriptional regulator |
| 1523 | CP035904.1 | QBE61359.1 JB | 840 [NA] | 279 [AA] | <199046-199886 | EWF21_00790 | hydroxyacid dehydrogenase |
| 1524 | CP035904.1 | QBE61360.1 JB | 190 [NA] | 63 [AA] | 200056->200245 | EWF21_00795 | alanine--glyoxylate aminotransferase family protein |
| 1525 | CP035904.1 | QBE61361.1 JB | 291 [NA] | 96 [AA] | 214498-214788 | EWF21_00845 | hypothetical protein |
| 1526 | CP035904.1 | QBE61362.1 JB | 81 [NA] | 26 [AA] | 282689->282771 | EWF21_01170 | transposase |
| 1527 | CP035904.1 | QBE61363.1 JB | 137 [NA] | 45 [AA] | <296485-296621 | EWF21_01195 | L-lactate dehydrogenase |
| 1528 | CP035904.1 | QBE61364.1 JB | 423 [NA] | 140 [AA] | 384433-384855 | EWF21_01615 | 3-hydroxyacyl-ACP dehydratase FabZ |
| 1529 | CP035904.1 | QBE61365.1 JB | 225 [NA] | 74 [AA] | 442816-443040 | EWF21_01885 | preprotein translocase subunit SecG |
| 1530 | CP035904.1 | QBE61366.1 JB | 828 [NA] | 275 [AA] | 451110-451937 | EWF21_01935 | TIGR00159 family protein |
| 1531 | CP035904.1 | QBE61367.1 JB | 723 [NA] | 240 [AA] | 473796-474518 | EWF21_02060 | response regulator transcription factor |
| 1532 | CP035904.1 | QBE61368.1 JB | 1353 [NA] | 450 [AA] | 491440-492792 | EWF21_02095 | glucose-6-phosphate isomerase |
| 1533 | CP035904.1 | QBE61369.1 JB | 198 [NA] | 65 [AA] | 492799-492996 | EWF21_02100 | hypothetical protein |
| 1534 | CP035904.1 | QBE61370.1 JB | 591 [NA] | 196 [AA] | 508333-508923 | EWF21_02190 | thymidine kinase |
| 1535 | CP035904.1 | QBE61371.1 JB | 78 [NA] | 25 [AA] | <549251-549330 | EWF21_02380 | VRR-NUC domain-containing protein |
| 1536 | CP035904.1 | QBE61372.1 JB | 984 [NA] | 327 [AA] | 642527-643510 | EWF21_02695 | competence protein |
| 1537 | CP035904.1 | QBE61373.1 JB | 1596 [NA] | 531 [AA] | 691148-692743 | EWF21_03045 | amidohydrolase |
| 1538 | CP035904.1 | QBE61374.1 JB | 166 [NA] | 55 [AA] | 735355->735520 | EWF21_03255 | nuclear transport factor 2 family protein |
| 1539 | CP035904.1 | QBE61375.1 JB | 86 [NA] | 28 [AA] | 744599->744684 | EWF21_03290 | sugar O-acetyltransferase |
| 1540 | CP035904.1 | QBE61376.1 JB | 159 [NA] | 53 [AA] | <747600-747758 | EWF21_03295 | MFS transporter |
| 1541 | CP035904.1 | QBE61377.1 JB | 180 [NA] | 59 [AA] | 759458->759637 | EWF21_03345 | site-specific integrase |
| 1542 | CP035904.1 | QBE61378.1 JB | 234 [NA] | 77 [AA] | <775503-775738 | EWF21_03365 | hypothetical protein |
| 1543 | CP035904.1 | QBE61379.1 JB | 81 [NA] | 26 [AA] | 777683->777764 | EWF21_03370 | transposase |
| 1544 | CP035904.1 | QBE61380.1 JB | 566 [NA] | 188 [AA] | 783261->783826 | EWF21_03380 | recombinase family protein |
| 1545 | CP035904.1 | QBE61381.1 JB | 1170 [NA] | 389 [AA] | 829093-830262 | EWF21_03490 | hydroxymethylglutaryl-CoA synthase |
| 1546 | CP035904.1 | QBE61382.1 JB | 126 [NA] | 41 [AA] | <881768-881893 | EWF21_03660 | IS3 family transposase |
| 1547 | CP035904.1 | QBE61383.1 JB | 238 [NA] | 79 [AA] | 889628->889865 | EWF21_03705 | histidinol-phosphatase |
| 1548 | CP035904.1 | QBE61384.1 JB | 528 [NA] | 175 [AA] | <897711-898239 | EWF21_03710 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme |
| 1549 | CP035904.1 | QBE61385.1 JB | 1168 [NA] | 389 [AA] | 904268->905435 | EWF21_03740 | 3-phosphoglycerate dehydrogenase |
| 1550 | CP035904.1 | QBE61386.1 JB | 288 [NA] | 95 [AA] | 936403->936692 | EWF21_03875 | NAD(P)-dependent alcohol dehydrogenase |
| 1551 | CP035904.1 | QBE61387.1 JB | 466 [NA] | 155 [AA] | <937029-937494 | EWF21_03880 | NAD(P)-dependent alcohol dehydrogenase |
| 1552 | CP035904.1 | QBE61388.1 JB | 1197 [NA] | 398 [AA] | 959317-960513 | EWF21_03965 | PLP-dependent transferase |
| 1553 | CP035904.1 | QBE61389.1 JB | 561 [NA] | 186 [AA] | 996026-996586 | EWF21_04110 | alkaline shock response membrane anchor protein AmaP |
| 1554 | CP035904.1 | QBE61390.1 JB | 269 [NA] | 90 [AA] | <1120914-1121182 | EWF21_04685 | PaaI family thioesterase |
| 1555 | CP035904.1 | QBE61391.1 JB | 1179 [NA] | 393 [AA] | 1123520->1124698 | EWF21_04700 | MFS transporter |
| 1556 | CP035904.1 | QBE61392.1 JB | 554 [NA] | 184 [AA] | <1125357->1125911 | EWF21_04705 | NAD(P)-dependent alcohol dehydrogenase |
| 1557 | CP035904.1 | QBE61393.1 JB | 1791 [NA] | 596 [AA] | 1138217->1140009 | EWF21_04780 | flavocytochrome c |
| 1558 | CP035904.1 | QBE61394.1 JB | 186 [NA] | 61 [AA] | 1165380->1165567 | EWF21_04900 | phenolic acid decarboxylase |
| 1559 | CP035904.1 | QBE61395.1 JB | 141 [NA] | 46 [AA] | 1175803->1175943 | EWF21_04950 | glycerophosphodiester phosphodiesterase |
| 1560 | CP035904.1 | QBE61396.1 JB | 263 [NA] | 87 [AA] | <1176224-1176486 | EWF21_04955 | glycerophosphodiester phosphodiesterase |
| 1561 | CP035904.1 | QBE61397.1 JB | 764 [NA] | 255 [AA] | <1177674-1178437 | EWF21_04960 | iron export ABC transporter permease subunit FetB |
| 1562 | CP035904.1 | QBE61398.1 JB | 483 [NA] | 160 [AA] | <1185172-1185655 | EWF21_04985 | IS256 family transposase |
| 1563 | CP035904.1 | QBE61399.1 JB | 78 [NA] | 25 [AA] | 1185620->1185699 | EWF21_04990 | transposase |
| 1564 | CP035904.1 | QBE61400.1 JB | 387 [NA] | 129 [AA] | <1190121-1190507 | EWF21_04995 | DNA topoisomerase III |
| 1565 | CP035904.1 | QBE61401.1 JB | 1509 [NA] | 502 [AA] | 1225228-1226736 | EWF21_05110 | glutamate--cysteine ligase |
| 1566 | CP035904.1 | QBE61402.1 JB | 450 [NA] | 149 [AA] | 1227619-1228068 | EWF21_05120 | sodium:proton antiporter |
| 1567 | CP035904.1 | QBE61403.1 JB | 1383 [NA] | 460 [AA] | 1285194-1286576 | EWF21_05430 | DHA2 family efflux MFS transporter permease subunit |
| 1568 | CP035904.1 | QBE61404.1 JB | 876 [NA] | 291 [AA] | 1340902-1341777 | EWF21_05665 | RluA family pseudouridine synthase |
| 1569 | CP035904.1 | QBE61405.1 JB | 1182 [NA] | 393 [AA] | 1356948-1358129 | EWF21_05750 | ATP-binding protein |
| 1570 | CP035904.1 | QBE61406.1 JB | 441 [NA] | 146 [AA] | 1381105-1381545 | EWF21_05850 | IS200/IS605 family transposase |
| 1571 | CP035904.1 | QBE61407.1 JB | 84 [NA] | 27 [AA] | <1399435-1399519 | EWF21_05905 | transposase |
| 1572 | CP035904.1 | QBE61408.1 JB | 84 [NA] | 27 [AA] | <1403278-1403362 | EWF21_05915 | transposase |
| 1573 | CP035904.1 | QBE61409.1 JB | 283 [NA] | 94 [AA] | 1405303->1405585 | EWF21_05935 | IS3 family transposase |
| 1574 | CP035904.1 | QBE61410.1 JB | 2661 [NA] | 886 [AA] | 1495840-1498500 | EWF21_06430 | DNA polymerase I |
| 1575 | CP035904.1 | QBE61411.1 JB | 2217 [NA] | 738 [AA] | 1553136-1555352 | EWF21_06730 | anaerobic ribonucleoside-triphosphate reductase |
| 1576 | CP035904.1 | QBE61412.1 JB | 198 [NA] | 65 [AA] | 1557511->1557709 | EWF21_06745 | QacE family quaternary ammonium compound efflux SMR transporter |
| 1577 | CP035904.1 | QBE61413.1 JB | 933 [NA] | 310 [AA] | 1584412->1585344 | EWF21_06915 | dTDP-glucose 4,6-dehydratase |
| 1578 | CP035904.1 | QBE61414.1 JB | 833 [NA] | 277 [AA] | <1588337->1589169 | EWF21_06920 | peptide chain release factor 3 |
| 1579 | CP035904.1 | QBE61415.1 JB | 161 [NA] | 53 [AA] | <1593085->1593245 | EWF21_06930 | glycosyltransferase |
| 1580 | CP035904.1 | QBE61416.1 JB | 218 [NA] | 73 [AA] | <1594102->1594319 | EWF21_06935 | AI-2E family transporter |
| 1581 | CP035904.1 | QBE61417.1 JB | 106 [NA] | 35 [AA] | <1597440->1597547 | EWF21_06940 | N-acetylmuramyl-L-alanine amidase |
| 1582 | CP035904.1 | QBE61418.1 JB | 74 [NA] | 25 [AA] | <1598150-1598223 | EWF21_06945 | hypothetical protein |
| 1583 | CP035904.1 | QBE61419.1 JB | 80 [NA] | 27 [AA] | <1600081-1600160 | EWF21_06955 | hypothetical protein |
| 1584 | CP035904.1 | QBE61420.1 JB | 138 [NA] | 45 [AA] | 1600602->1600740 | EWF21_06960 | IS30 family transposase |
| 1585 | CP035904.1 | QBE61421.1 JB | 781 [NA] | 260 [AA] | 1601158->1601938 | EWF21_06970 | IS3 family transposase |
| 1586 | CP035904.1 | QBE61422.1 JB | 1086 [NA] | 361 [AA] | 1606043->1607130 | EWF21_06975 | UDP-galactopyranose mutase |
| 1587 | CP035904.1 | QBE61423.1 JB | 140 [NA] | 46 [AA] | <1608463->1608602 | EWF21_06980 | IS3 family transposase |
| 1588 | CP035904.1 | QBE61424.1 JB | 382 [NA] | 127 [AA] | <1609120->1609502 | EWF21_06985 | IS3 family transposase |
| 1589 | CP035904.1 | QBE61425.1 JB | 333 [NA] | 110 [AA] | 1611613-1611945 | EWF21_07000 | transposase |
| 1590 | CP035904.1 | QBE61426.1 JB | 755 [NA] | 251 [AA] | <1618140-1618894 | EWF21_07040 | DUF4422 domain-containing protein |
| 1591 | CP035904.1 | QBE61427.1 JB | 501 [NA] | 166 [AA] | 1622304->1622805 | EWF21_07070 | LTA synthase family protein |
| 1592 | CP035904.1 | QBE61428.1 JB | 1086 [NA] | 362 [AA] | <1624158-1625243 | EWF21_07075 | LTA synthase family protein |
| 1593 | CP035904.1 | QBE61429.1 JB | 1539 [NA] | 512 [AA] | 1646309-1647847 | EWF21_07205 | copper oxidase |
| 1594 | CP035904.1 | QBE61430.1 JB | 81 [NA] | 26 [AA] | <1660465-1660547 | EWF21_07255 | transposase |
| 1595 | CP035904.1 | QBE61431.1 JB | 804 [NA] | 267 [AA] | 1691073-1691876 | EWF21_07380 | energy-coupling factor transporter transmembrane protein EcfT |
| 1596 | CP035904.1 | QBE61432.1 JB | 315 [NA] | 104 [AA] | 1729833->1730149 | EWF21_07610 | sugar O-acetyltransferase |
| 1597 | CP035904.1 | QBE61433.1 JB | 182 [NA] | 61 [AA] | <1731380-1731561 | EWF21_07615 | cobalt ABC transporter permease |
| 1598 | CP035904.1 | QBE61434.1 JB | 663 [NA] | 220 [AA] | 1765091-1765753 | EWF21_07795 | uracil-DNA glycosylase |
| 1599 | CP035904.1 | QBE61435.1 JB | 234 [NA] | 77 [AA] | 1769888->1770121 | EWF21_07840 | IS256 family transposase |
| 1600 | CP035904.1 | QBE61436.1 JB | 829 [NA] | 276 [AA] | <1770236-1771064 | EWF21_07845 | IS256 family transposase |
| 1601 | CP035904.1 | QBE61437.1 JB | 261 [NA] | 86 [AA] | <1772435-1772696 | EWF21_07855 | transposase |
| 1602 | CP035904.1 | QBE61438.1 JB | 798 [NA] | 265 [AA] | <1785148-1785947 | EWF21_07910 | IS3 family transposase |
| 1603 | CP035904.1 | QBE61439.1 JB | 1011 [NA] | 336 [AA] | 1789003-1790013 | EWF21_07925 | zinc-binding alcohol dehydrogenase family protein |
| 1604 | CP035904.1 | QBE61440.1 JB | 216 [NA] | 71 [AA] | 1810152-1810367 | EWF21_08015 | hypothetical protein |
| 1605 | CP035904.1 | QBE61441.1 JB | 117 [NA] | 38 [AA] | <1815860-1815978 | EWF21_08045 | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
| 1606 | CP035904.1 | QBE61442.1 JB | 1197 [NA] | 399 [AA] | 1824250->1825446 | EWF21_08095 | divalent metal cation transporter |
| 1607 | CP035904.1 | QBE61443.1 JB | 948 [NA] | 315 [AA] | 1843696-1844643 | EWF21_08185 | ABC transporter permease |
| 1608 | CP035904.1 | QBE61444.1 JB | 876 [NA] | 291 [AA] | 1917343-1918218 | EWF21_08505 | ROK family protein |
| 1609 | CP035904.1 | QBE61445.1 JB | 888 [NA] | 295 [AA] | 1924099-1924986 | EWF21_08540 | RluA family pseudouridine synthase |
| 1610 | CP035904.1 | QBE61446.1 JB | 96 [NA] | 31 [AA] | 2012212->2012308 | EWF21_08905 | IS30 family transposase |
| 1611 | CP035904.1 | QBE61447.1 JB | 627 [NA] | 208 [AA] | <2012850-2013478 | EWF21_08910 | IS3 family transposase |
| 1612 | CP035904.1 | QBE61448.1 JB | 1186 [NA] | 395 [AA] | <2027184-2028369 | EWF21_08950 | IS256 family transposase |
| 1613 | CP035904.1 | QBE61449.1 JB | 662 [NA] | 221 [AA] | <2028464-2029125 | EWF21_08955 | IS256 family transposase |
| 1614 | CP035904.1 | QBE61450.1 JB | 84 [NA] | 27 [AA] | <2034333-2034416 | EWF21_08970 | transposase |