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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Limosilactobacillus fermentum SRCM103285 (SEQF9207.1)
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PROKKA Annotation for SEQF9207.1
Genome selected: Limosilactobacillus fermentum SRCM103285
Contigs:1 Bases:2146888 bps
CDS:2124 rRNA:15
tmRNA:1 tRNA:59
Annotation Table [page:5]
Number of Records Found: 2124 [5 Pages]
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# Molecule PID NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
2001 SEQF9207.1_CP035054.1 SEQF9207.1_02098 JB 165 [NA] 54 [AA] 2000120-2000284 hypothetical protein
2002 SEQF9207.1_CP035054.1 SEQF9207.1_02099 JB 711 [NA] 236 [AA] 2000377-2001087 hcaB_2 3-phenylpropionate-dihydrodiolcinnamic acid-dihydrodiol dehydrogenase
2003 SEQF9207.1_CP035054.1 SEQF9207.1_02100 JB 1551 [NA] 516 [AA] 2001263-2002813 hypothetical protein
2004 SEQF9207.1_CP035054.1 SEQF9207.1_02101 JB 1017 [NA] 338 [AA] 2002825-2003841 hypothetical protein
2005 SEQF9207.1_CP035054.1 SEQF9207.1_02102 JB 1296 [NA] 431 [AA] 2004205-2005500 purB Adenylosuccinate lyase
2006 SEQF9207.1_CP035054.1 SEQF9207.1_02103 JB 1140 [NA] 379 [AA] 2005519-2006658 purK_2 N5-carboxyaminoimidazole ribonucleotide synthase
2007 SEQF9207.1_CP035054.1 SEQF9207.1_02104 JB 486 [NA] 161 [AA] 2006642-2007127 purE N5-carboxyaminoimidazole ribonucleotide mutase
2008 SEQF9207.1_CP035054.1 SEQF9207.1_02105 JB 1662 [NA] 553 [AA] 2007414-2009075 fhs1 Formate--tetrahydrofolate ligase 1
2009 SEQF9207.1_CP035054.1 SEQF9207.1_02106 JB 1041 [NA] 346 [AA] 2009163-2010203 hypothetical protein
2010 SEQF9207.1_CP035054.1 SEQF9207.1_02107 JB 180 [NA] 59 [AA] 2010232-2010411 hypothetical protein
2011 SEQF9207.1_CP035054.1 SEQF9207.1_02108 JB 456 [NA] 151 [AA] 2010532-2010987 hypothetical protein
2012 SEQF9207.1_CP035054.1 SEQF9207.1_02109 JB 1251 [NA] 416 [AA] 2011061-2012311 IS200IS605 family transposase ISLjo5
2013 SEQF9207.1_CP035054.1 SEQF9207.1_02110 JB 1188 [NA] 395 [AA] 2012551-2013738 cfa Cyclopropane-fatty-acyl-phospholipid synthase
2014 SEQF9207.1_CP035054.1 SEQF9207.1_02111 JB 546 [NA] 181 [AA] 2014013-2014558 ydeN Putative hydrolase YdeN
2015 SEQF9207.1_CP035054.1 SEQF9207.1_02112 JB 420 [NA] 139 [AA] 2014756-2015175 hypothetical protein
2016 SEQF9207.1_CP035054.1 SEQF9207.1_02113 JB 861 [NA] 286 [AA] 2015185-2016045 hypothetical protein
2017 SEQF9207.1_CP035054.1 SEQF9207.1_02114 JB 1296 [NA] 431 [AA] 2016261-2017556 dacA_3 D-alanyl-D-alanine carboxypeptidase DacA
2018 SEQF9207.1_CP035054.1 SEQF9207.1_02115 JB 1143 [NA] 380 [AA] 2017556-2018698 sasA_4 Adaptive-response sensory-kinase SasA
2019 SEQF9207.1_CP035054.1 SEQF9207.1_02116 JB 699 [NA] 232 [AA] 2018896-2019594 phoP_2 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
2020 SEQF9207.1_CP035054.1 SEQF9207.1_02117 JB 507 [NA] 168 [AA] 2019782-2020288 hypothetical protein
2021 SEQF9207.1_CP035054.1 SEQF9207.1_02118 JB 1221 [NA] 406 [AA] 2020495-2021715 IS256 family transposase ISCARN68
2022 SEQF9207.1_CP035054.1 SEQF9207.1_02119 JB 162 [NA] 53 [AA] 2021712-2021873 hypothetical protein
2023 SEQF9207.1_CP035054.1 SEQF9207.1_02120 JB 1572 [NA] 523 [AA] 2022008-2023579 hypothetical protein
2024 SEQF9207.1_CP035054.1 SEQF9207.1_02121 JB 2208 [NA] 735 [AA] 2023606-2025813 hypothetical protein
2025 SEQF9207.1_CP035054.1 SEQF9207.1_02122 JB 849 [NA] 282 [AA] 2025810-2026658 hypothetical protein
2026 SEQF9207.1_CP035054.1 SEQF9207.1_02123 JB 1059 [NA] 352 [AA] 2026918-2027976 strE_2 dTDP-glucose 4%2C6-dehydratase
2027 SEQF9207.1_CP035054.1 SEQF9207.1_02124 JB 729 [NA] 242 [AA] 2027978-2028706 tarI2 Ribitol-5-phosphate cytidylyltransferase 2
2028 SEQF9207.1_CP035054.1 SEQF9207.1_02125 JB 996 [NA] 331 [AA] 2028703-2029698 hypothetical protein
2029 SEQF9207.1_CP035054.1 SEQF9207.1_02126 JB 813 [NA] 270 [AA] 2029714-2030526 hypothetical protein
2030 SEQF9207.1_CP035054.1 SEQF9207.1_02127 JB 1464 [NA] 487 [AA] 2030576-2032039 hypothetical protein
2031 SEQF9207.1_CP035054.1 SEQF9207.1_02128 JB 822 [NA] 273 [AA] 2032056-2032877 hypothetical protein
2032 SEQF9207.1_CP035054.1 SEQF9207.1_02129 JB 933 [NA] 310 [AA] 2032917-2033849 arnC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
2033 SEQF9207.1_CP035054.1 SEQF9207.1_02130 JB 549 [NA] 182 [AA] 2034195-2034743 hypothetical protein
2034 SEQF9207.1_CP035054.1 SEQF9207.1_02131 JB 1359 [NA] 452 [AA] 2034915-2036273 IS4 family transposase ISLre1
2035 SEQF9207.1_CP035054.1 SEQF9207.1_02132 JB 495 [NA] 164 [AA] 2036334-2036828 hypothetical protein
2036 SEQF9207.1_CP035054.1 SEQF9207.1_02133 JB 969 [NA] 322 [AA] 2036828-2037796 hypothetical protein
2037 SEQF9207.1_CP035054.1 SEQF9207.1_02134 JB 1050 [NA] 349 [AA] 2037807-2038856 epsJ putative glycosyltransferase EpsJ
2038 SEQF9207.1_CP035054.1 SEQF9207.1_02135 JB 1179 [NA] 392 [AA] 2038873-2040051 epsD Putative glycosyltransferase EpsD
2039 SEQF9207.1_CP035054.1 SEQF9207.1_02136 JB 510 [NA] 169 [AA] 2040128-2040637 epsL putative sugar transferase EpsL
2040 SEQF9207.1_CP035054.1 SEQF9207.1_02137 JB 771 [NA] 256 [AA] 2040784-2041554 ywqE Tyrosine-protein phosphatase YwqE
2041 SEQF9207.1_CP035054.1 SEQF9207.1_02138 JB 744 [NA] 247 [AA] 2041575-2042318 ywqD Tyrosine-protein kinase YwqD
2042 SEQF9207.1_CP035054.1 SEQF9207.1_02139 JB 771 [NA] 256 [AA] 2042335-2043105 hypothetical protein
2043 SEQF9207.1_CP035054.1 SEQF9207.1_02140 JB 1002 [NA] 333 [AA] 2043105-2044106 tagU_2 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU
2044 SEQF9207.1_CP035054.1 SEQF9207.1_02141 JB 1143 [NA] 380 [AA] 2044455-2045597 IMPDH_2 Inosine-5-monophosphate dehydrogenase
2045 SEQF9207.1_CP035054.1 SEQF9207.1_02142 JB 774 [NA] 257 [AA] 2045869-2046642 hypothetical protein
2046 SEQF9207.1_CP035054.1 SEQF9207.1_02143 JB 1098 [NA] 365 [AA] 2046676-2047773 ychF Ribosome-binding ATPase YchF
2047 SEQF9207.1_CP035054.1 SEQF9207.1_02144 JB 201 [NA] 66 [AA] 2047789-2047989 hypothetical protein
2048 SEQF9207.1_CP035054.1 SEQF9207.1_02145 JB 834 [NA] 277 [AA] 2048002-2048835 spo0J Stage 0 sporulation protein J
2049 SEQF9207.1_CP035054.1 SEQF9207.1_02146 JB 936 [NA] 311 [AA] 2048849-2049784 noc Nucleoid occlusion protein
2050 SEQF9207.1_CP035054.1 SEQF9207.1_02147 JB 738 [NA] 245 [AA] 2049803-2050540 rsmG Ribosomal RNA small subunit methyltransferase G
2051 SEQF9207.1_CP035054.1 SEQF9207.1_02148 JB 921 [NA] 306 [AA] 2050729-2051649 rihC Non-specific ribonucleoside hydrolase RihC
2052 SEQF9207.1_CP035054.1 SEQF9207.1_02149 JB 1200 [NA] 399 [AA] 2051884-2053083 nupG Purine nucleoside transport protein NupG
2053 SEQF9207.1_CP035054.1 SEQF9207.1_02150 JB 1374 [NA] 457 [AA] 2053964-2055337 cycA_2 D-serineD-alanineglycine transporter
2054 SEQF9207.1_CP035054.1 SEQF9207.1_02151 JB 744 [NA] 247 [AA] 2055844-2056587 glnQ_3 Glutamine transport ATP-binding protein GlnQ
2055 SEQF9207.1_CP035054.1 SEQF9207.1_02152 JB 1455 [NA] 484 [AA] 2056591-2058045 mltF Membrane-bound lytic murein transglycosylase F
2056 SEQF9207.1_CP035054.1 SEQF9207.1_02154 JB 1014 [NA] 337 [AA] 2060024-2061037 trpS2 Tryptophan--tRNA ligase 2
2057 SEQF9207.1_CP035054.1 SEQF9207.1_02156 JB 1299 [NA] 432 [AA] 2061540-2062838 serS Serine--tRNA ligase
2058 SEQF9207.1_CP035054.1 SEQF9207.1_02157 JB 3105 [NA] 1034 [AA] 2063126-2066230 sbcC Nuclease SbcCD subunit C
2059 SEQF9207.1_CP035054.1 SEQF9207.1_02158 JB 1134 [NA] 377 [AA] 2066227-2067360 sbcD Nuclease SbcCD subunit D
2060 SEQF9207.1_CP035054.1 SEQF9207.1_02159 JB 132 [NA] 43 [AA] 2067612-2067743 hypothetical protein
2061 SEQF9207.1_CP035054.1 SEQF9207.1_02160 JB 1530 [NA] 509 [AA] 2067758-2069287 dltA D-alanine--D-alanyl carrier protein ligase
2062 SEQF9207.1_CP035054.1 SEQF9207.1_02161 JB 1227 [NA] 408 [AA] 2069287-2070513 hypothetical protein
2063 SEQF9207.1_CP035054.1 SEQF9207.1_02162 JB 237 [NA] 78 [AA] 2070543-2070779 dltC D-alanyl carrier protein
2064 SEQF9207.1_CP035054.1 SEQF9207.1_02163 JB 1293 [NA] 430 [AA] 2070793-2072085 dltD Protein DltD
2065 SEQF9207.1_CP035054.1 SEQF9207.1_02164 JB 636 [NA] 211 [AA] 2072203-2072838 iolS_2 Aldo-keto reductase IolS
2066 SEQF9207.1_CP035054.1 SEQF9207.1_02166 JB 1425 [NA] 474 [AA] 2073277-2074701 rlmCD_2 23S rRNA (uracil-C(5))-methyltransferase RlmCD
2067 SEQF9207.1_CP035054.1 SEQF9207.1_02167 JB 1149 [NA] 382 [AA] 2075001-2076149 dapE_2 putative succinyl-diaminopimelate desuccinylase
2068 SEQF9207.1_CP035054.1 SEQF9207.1_02168 JB 1164 [NA] 387 [AA] 2076288-2077451 IS200IS605 family transposase ISLhe65
2069 SEQF9207.1_CP035054.1 SEQF9207.1_02169 JB 267 [NA] 88 [AA] 2077448-2077714 hypothetical protein
2070 SEQF9207.1_CP035054.1 SEQF9207.1_02170 JB 702 [NA] 233 [AA] 2078093-2078794 metP Methionine import system permease protein MetP
2071 SEQF9207.1_CP035054.1 SEQF9207.1_02171 JB 1065 [NA] 354 [AA] 2078787-2079851 metN Methionine import ATP-binding protein MetN
2072 SEQF9207.1_CP035054.1 SEQF9207.1_02172 JB 843 [NA] 280 [AA] 2079877-2080719 metQ_2 D-methionine-binding lipoprotein MetQ
2073 SEQF9207.1_CP035054.1 SEQF9207.1_02174 JB 1497 [NA] 498 [AA] 2081129-2082625 gtfA_1 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
2074 SEQF9207.1_CP035054.1 SEQF9207.1_02175 JB 1539 [NA] 512 [AA] 2082625-2084163 gtfA_2 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
2075 SEQF9207.1_CP035054.1 SEQF9207.1_02176 JB 393 [NA] 130 [AA] 2084306-2084698 hypothetical protein
2076 SEQF9207.1_CP035054.1 SEQF9207.1_02177 JB 366 [NA] 121 [AA] 2085186-2085551 hypothetical protein
2077 SEQF9207.1_CP035054.1 SEQF9207.1_02178 JB 627 [NA] 208 [AA] 2085615-2086241 pyrE_2 Orotate phosphoribosyltransferase
2078 SEQF9207.1_CP035054.1 SEQF9207.1_02179 JB 732 [NA] 243 [AA] 2086241-2086972 pyrF Orotidine 5-phosphate decarboxylase
2079 SEQF9207.1_CP035054.1 SEQF9207.1_02180 JB 540 [NA] 179 [AA] 2087091-2087630 pyrR Bifunctional protein pyrR
2080 SEQF9207.1_CP035054.1 SEQF9207.1_02181 JB 1383 [NA] 460 [AA] 2087914-2089296 sad Succinate semialdehyde dehydrogenase [NAD(P)+] Sad
2081 SEQF9207.1_CP035054.1 SEQF9207.1_02182 JB 1290 [NA] 429 [AA] 2089624-2090913 purA Adenylosuccinate synthetase
2082 SEQF9207.1_CP035054.1 SEQF9207.1_02183 JB 975 [NA] 324 [AA] 2091110-2092084 guaC GMP reductase
2083 SEQF9207.1_CP035054.1 SEQF9207.1_02184 JB 555 [NA] 184 [AA] 2092165-2092719 hypothetical protein
2084 SEQF9207.1_CP035054.1 SEQF9207.1_02185 JB 732 [NA] 243 [AA] 2092858-2093589 ybhF putative multidrug ABC transporter ATP-binding protein YbhF
2085 SEQF9207.1_CP035054.1 SEQF9207.1_02186 JB 1116 [NA] 371 [AA] 2093582-2094697 lnrN Linearmycin resistance permease protein LnrN
2086 SEQF9207.1_CP035054.1 SEQF9207.1_02187 JB 357 [NA] 118 [AA] 2094736-2095092 mgsR Regulatory protein MgsR
2087 SEQF9207.1_CP035054.1 SEQF9207.1_02188 JB 1626 [NA] 541 [AA] 2095386-2097011 hypothetical protein
2088 SEQF9207.1_CP035054.1 SEQF9207.1_02189 JB 864 [NA] 287 [AA] 2097249-2098112 yvgN_2 Glyoxal reductase
2089 SEQF9207.1_CP035054.1 SEQF9207.1_02190 JB 4014 [NA] 1337 [AA] 2098112-2102125 addA ATP-dependent helicasenuclease subunit A
2090 SEQF9207.1_CP035054.1 SEQF9207.1_02191 JB 3738 [NA] 1245 [AA] 2102132-2105869 addB ATP-dependent helicasedeoxyribonuclease subunit B
2091 SEQF9207.1_CP035054.1 SEQF9207.1_02192 JB 1461 [NA] 486 [AA] 2106352-2107812 clsA Major cardiolipin synthase ClsA
2092 SEQF9207.1_CP035054.1 SEQF9207.1_02193 JB 2094 [NA] 697 [AA] 2108113-2110206 clpC_2 putative ATP-dependent Clp protease ATP-binding subunit
2093 SEQF9207.1_CP035054.1 SEQF9207.1_02194 JB 231 [NA] 76 [AA] 2110291-2110521 hypothetical protein
2094 SEQF9207.1_CP035054.1 SEQF9207.1_02195 JB 1185 [NA] 394 [AA] 2110870-2112054 dapX_3 putative N-acetyl-LL-diaminopimelate aminotransferase
2095 SEQF9207.1_CP035054.1 SEQF9207.1_02196 JB 993 [NA] 330 [AA] 2112070-2113062 ldhD D-lactate dehydrogenase
2096 SEQF9207.1_CP035054.1 SEQF9207.1_02197 JB 702 [NA] 233 [AA] 2113589-2114290 menH_2 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
2097 SEQF9207.1_CP035054.1 SEQF9207.1_02198 JB 978 [NA] 325 [AA] 2114345-2115322 yxeI_2 putative protein YxeI
2098 SEQF9207.1_CP035054.1 SEQF9207.1_02199 JB 666 [NA] 221 [AA] 2115373-2116038 yhaP_2 putative protein YhaP
2099 SEQF9207.1_CP035054.1 SEQF9207.1_02200 JB 669 [NA] 222 [AA] 2116121-2116789 yvdM Beta-phosphoglucomutase
2100 SEQF9207.1_CP035054.1 SEQF9207.1_02201 JB 2247 [NA] 748 [AA] 2116936-2119182 malP Maltose phosphorylase
2101 SEQF9207.1_CP035054.1 SEQF9207.1_02202 JB 1344 [NA] 447 [AA] 2119195-2120538 hypothetical protein
2102 SEQF9207.1_CP035054.1 SEQF9207.1_02203 JB 936 [NA] 311 [AA] 2120918-2121853 purR_2 HTH-type transcriptional repressor PurR
2103 SEQF9207.1_CP035054.1 SEQF9207.1_02204 JB 429 [NA] 142 [AA] 2121859-2122287 ywnA_3 Putative HTH-type transcriptional regulator YwnA
2104 SEQF9207.1_CP035054.1 SEQF9207.1_02205 JB 480 [NA] 159 [AA] 2122499-2122978 rlmH Ribosomal RNA large subunit methyltransferase H
2105 SEQF9207.1_CP035054.1 SEQF9207.1_02206 JB 1272 [NA] 423 [AA] 2123486-2124757 htrA Serine protease Do-like HtrA
2106 SEQF9207.1_CP035054.1 SEQF9207.1_02207 JB 816 [NA] 271 [AA] 2124832-2125647 yycJ Putative metallo-hydrolase YycJ
2107 SEQF9207.1_CP035054.1 SEQF9207.1_02208 JB 801 [NA] 266 [AA] 2125662-2126462 yycI Two-component system WalRWalK regulatory protein YycI
2108 SEQF9207.1_CP035054.1 SEQF9207.1_02209 JB 1299 [NA] 432 [AA] 2126464-2127762 hypothetical protein
2109 SEQF9207.1_CP035054.1 SEQF9207.1_02210 JB 1860 [NA] 619 [AA] 2127746-2129605 walK Sensor protein kinase WalK
2110 SEQF9207.1_CP035054.1 SEQF9207.1_02211 JB 708 [NA] 235 [AA] 2129617-2130324 walR Transcriptional regulatory protein WalR
2111 SEQF9207.1_CP035054.1 SEQF9207.1_02214 JB 285 [NA] 94 [AA] 2131010-2131294 hypothetical protein
2112 SEQF9207.1_CP035054.1 SEQF9207.1_02215 JB 1176 [NA] 391 [AA] 2131354-2132529 hypothetical protein
2113 SEQF9207.1_CP035054.1 SEQF9207.1_02216 JB 1404 [NA] 467 [AA] 2132613-2134016 dnaC Replicative DNA helicase
2114 SEQF9207.1_CP035054.1 SEQF9207.1_02217 JB 453 [NA] 150 [AA] 2134061-2134513 rplI 50S ribosomal protein L9
2115 SEQF9207.1_CP035054.1 SEQF9207.1_02218 JB 2034 [NA] 677 [AA] 2134513-2136546 gdpP Cyclic-di-AMP phosphodiesterase GdpP
2116 SEQF9207.1_CP035054.1 SEQF9207.1_02219 JB 237 [NA] 78 [AA] 2136671-2136907 rpsR 30S ribosomal protein S18
2117 SEQF9207.1_CP035054.1 SEQF9207.1_02220 JB 726 [NA] 241 [AA] 2136946-2137671 Single-stranded DNA-binding protein
2118 SEQF9207.1_CP035054.1 SEQF9207.1_02221 JB 294 [NA] 97 [AA] 2137712-2138005 rpsF 30S ribosomal protein S6
2119 SEQF9207.1_CP035054.1 SEQF9207.1_02222 JB 2511 [NA] 836 [AA] 2138212-2140722 gyrA DNA gyrase subunit A
2120 SEQF9207.1_CP035054.1 SEQF9207.1_02223 JB 1950 [NA] 649 [AA] 2140748-2142697 gyrB DNA gyrase subunit B
2121 SEQF9207.1_CP035054.1 SEQF9207.1_02224 JB 1122 [NA] 373 [AA] 2142697-2143818 recF DNA replication and repair protein RecF
2122 SEQF9207.1_CP035054.1 SEQF9207.1_02225 JB 219 [NA] 72 [AA] 2143828-2144046 hypothetical protein
2123 SEQF9207.1_CP035054.1 SEQF9207.1_02226 JB 1140 [NA] 379 [AA] 2144268-2145407 dnaN Beta sliding clamp
2124 SEQF9207.1_CP035054.1 SEQF9207.1_02227 JB 1317 [NA] 438 [AA] 2145572-2146888 dnaA Chromosomal replication initiator protein DnaA