Genome Explorer: Agrobacterium tumefaciens 1D1609 (SEQF8732.1)
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NCBI Annotation for SEQF8732.1
| Genome selected: Agrobacterium tumefaciens 1D1609 | |||
| Contigs: | 5 | Bases: | 5985137 bps |
| CDS: | 5630 | rRNA: | 12 |
| tmRNA: | 1 | tRNA: | 53 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 5501 | CP026928.1 | AVH45555.1 JB | 1314 [NA] | 437 [AA] | 43757-45070 | At1D1609_55240 | hypothetical protein |
| 5502 | CP026928.1 | AVH45556.1 JB | 1413 [NA] | 470 [AA] | 45142-46554 | At1D1609_55250 | UvrD/REP helicase domain protein |
| 5503 | CP026928.1 | AVH45557.1 JB | 1731 [NA] | 576 [AA] | 46547-48277 | At1D1609_55260 | chromosome segregation protein SMC |
| 5504 | CP026928.1 | AVH45558.1 JB | 183 [NA] | 60 [AA] | 48975-49157 | At1D1609_55270 | helicase |
| 5505 | CP026928.1 | AVH45559.1 JB | 963 [NA] | 320 [AA] | 49369-50331 | At1D1609_55280 | hypothetical protein |
| 5506 | CP026928.1 | AVH45560.1 JB | 603 [NA] | 200 [AA] | 50474-51076 | At1D1609_55290 | hypothetical protein |
| 5507 | CP026928.1 | AVH45561.1 JB | 402 [NA] | 133 [AA] | 51092-51493 | At1D1609_55300 | hypothetical protein |
| 5508 | CP026928.1 | AVH45562.1 JB | 5106 [NA] | 1701 [AA] | 51593-56698 | At1D1609_55310 | lactate dehydrogenase |
| 5509 | CP026928.1 | AVH45563.1 JB | 873 [NA] | 290 [AA] | 56850-57722 | At1D1609_55320 | hypothetical protein |
| 5510 | CP026928.1 | AVH45564.1 JB | 1764 [NA] | 587 [AA] | 57719-59482 | At1D1609_55330 | hypothetical protein |
| 5511 | CP026928.1 | AVH45565.1 JB | 1845 [NA] | 614 [AA] | 59893-61737 | At1D1609_55340 | plasmid partitioning protein |
| 5512 | CP026928.1 | AVH45566.1 JB | 471 [NA] | 156 [AA] | 61836-62306 | At1D1609_55350 | hypothetical protein |
| 5513 | CP026928.1 | AVH45567.1 JB | 891 [NA] | 296 [AA] | 62303-63193 | At1D1609_55360 | hypothetical protein |
| 5514 | CP026928.1 | AVH45568.1 JB | 381 [NA] | 126 [AA] | 63190-63570 | At1D1609_55370 | hypothetical protein |
| 5515 | CP026928.1 | AVH45569.1 JB | 600 [NA] | 199 [AA] | 63961-64560 | At1D1609_55380 | hypothetical protein |
| 5516 | CP026928.1 | AVH45570.1 JB | 468 [NA] | 155 [AA] | 65159-65626 | At1D1609_55400 | hypothetical protein |
| 5517 | CP026928.1 | AVH45571.1 JB | 153 [NA] | 50 [AA] | 66168-66320 | At1D1609_55410 | ATPase AAA |
| 5518 | CP026928.1 | AVH45572.1 JB | 633 [NA] | 210 [AA] | 66600-67232 | At1D1609_55420 | GntR family transcriptional regulator |
| 5519 | CP026928.1 | AVH45573.1 JB | 1077 [NA] | 358 [AA] | 67330-68406 | At1D1609_55430 | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein |
| 5520 | CP026928.1 | AVH45574.1 JB | 1431 [NA] | 476 [AA] | 68408-69838 | At1D1609_55440 | aldehyde dehydrogenase |
| 5521 | CP026928.1 | AVH45575.1 JB | 489 [NA] | 162 [AA] | 69835-70323 | At1D1609_55450 | hypothetical protein |
| 5522 | CP026928.1 | AVH45576.1 JB | 1041 [NA] | 346 [AA] | 70434-71474 | At1D1609_55460 | hypothetical protein |
| 5523 | CP026928.1 | AVH45577.1 JB | 801 [NA] | 266 [AA] | 71538-72338 | At1D1609_55470 | hypothetical protein |
| 5524 | CP026928.1 | AVH45578.1 JB | 831 [NA] | 276 [AA] | 72335-73165 | At1D1609_55480 | hypothetical protein |
| 5525 | CP026928.1 | AVH45579.1 JB | 837 [NA] | 278 [AA] | 73191-74027 | At1D1609_55490 | hypothetical protein |
| 5526 | CP026928.1 | AVH45580.1 JB | 954 [NA] | 317 [AA] | 74024-74977 | At1D1609_55500 | 3-hydroxybutyryl-CoA dehydrogenase |
| 5527 | CP026928.1 | AVH45581.1 JB | 474 [NA] | 157 [AA] | 75818-76291 | At1D1609_55510 | purine-binding chemotaxis protein CheW |
| 5528 | CP026928.1 | AVH45582.1 JB | 1794 [NA] | 597 [AA] | 76291-78084 | At1D1609_55520 | methyl-accepting chemotaxis protein |
| 5529 | CP026928.1 | AVH45583.1 JB | 114 [NA] | 37 [AA] | 78118-78231 | At1D1609_55530 | hypothetical protein |
| 5530 | CP026928.1 | AVH45584.1 JB | 732 [NA] | 243 [AA] | 78384-79115 | At1D1609_55540 | DNA-binding protein |
| 5531 | CP026928.1 | AVH45585.1 JB | 297 [NA] | 98 [AA] | 79709-80005 | At1D1609_55550 | hypothetical protein |
| 5532 | CP026928.1 | AVH45586.1 JB | 297 [NA] | 98 [AA] | 80547-80843 | At1D1609_55560 | hypothetical protein |
| 5533 | CP026928.1 | AVH45587.1 JB | 528 [NA] | 175 [AA] | 80929-81456 | At1D1609_55570 | DNA damage-inducible protein DinB |
| 5534 | CP026928.1 | AVH45588.1 JB | 636 [NA] | 211 [AA] | 81523-82158 | At1D1609_55580 | TetR family transcriptional regulator |
| 5535 | CP026928.1 | AVH45589.1 JB | 147 [NA] | 48 [AA] | 82301-82447 | At1D1609_55590 | hypothetical protein |
| 5536 | CP026928.1 | AVH45590.1 JB | 276 [NA] | 91 [AA] | 82490-82765 | At1D1609_55600 | hypothetical protein |
| 5537 | CP026928.1 | AVH45591.1 JB | 1656 [NA] | 551 [AA] | 82774-84429 | At1D1609_55610 | transposase |
| 5538 | CP026928.1 | AVH45592.1 JB | 348 [NA] | 115 [AA] | 84475-84822 | At1D1609_55620 | transposase |
| 5539 | CP026928.1 | AVH45593.1 JB | 399 [NA] | 132 [AA] | 84819-85217 | At1D1609_55630 | transposase |
| 5540 | CP026928.1 | AVH45594.1 JB | 1119 [NA] | 372 [AA] | 85534-86652 | At1D1609_55640 | transposase |
| 5541 | CP026928.1 | AVH45595.1 JB | 2976 [NA] | 991 [AA] | 87361-90336 | At1D1609_55650 | transposase |
| 5542 | CP026928.1 | AVH45596.1 JB | 297 [NA] | 98 [AA] | 90439-90735 | At1D1609_55660 | 1,2-oxophytodienoate reductase |
| 5543 | CP026928.1 | AVH45597.1 JB | 297 [NA] | 98 [AA] | 91037-91333 | At1D1609_55665 | hypothetical protein |
| 5544 | CP026928.1 | AVH45598.1 JB | 288 [NA] | 95 [AA] | 91371-91658 | At1D1609_55670 | hypothetical protein |
| 5545 | CP026928.1 | AVH45599.1 JB | 336 [NA] | 111 [AA] | 91962-92297 | At1D1609_55680 | hypothetical protein |
| 5546 | CP026928.1 | AVH45600.1 JB | 282 [NA] | 93 [AA] | 92452-92733 | At1D1609_55685 | hypothetical protein |
| 5547 | CP026928.1 | AVH45601.1 JB | 192 [NA] | 63 [AA] | 93516-93707 | At1D1609_55690 | hypothetical protein |
| 5548 | CP026928.1 | AVH45602.1 JB | 924 [NA] | 307 [AA] | 94024-94947 | At1D1609_55700 | LysR family transcriptional regulator |
| 5549 | CP026928.1 | AVH45603.1 JB | 1110 [NA] | 369 [AA] | 95276-96385 | At1D1609_55710 | spermidine/putrescine transport system substrate-binding protein |
| 5550 | CP026928.1 | AVH45604.1 JB | 1011 [NA] | 336 [AA] | 96504-97514 | At1D1609_55720 | spermidine/putrescine transport system permease protein |
| 5551 | CP026928.1 | AVH45605.1 JB | 795 [NA] | 264 [AA] | 97514-98308 | At1D1609_55730 | spermidine/putrescine transport system permease protein |
| 5552 | CP026928.1 | AVH45606.1 JB | 1086 [NA] | 361 [AA] | 98308-99393 | At1D1609_55740 | spermidine/putrescine transport system ATP-binding protein |
| 5553 | CP026928.1 | AVH45607.1 JB | 951 [NA] | 316 [AA] | 99604-100554 | At1D1609_55750 | NAD/NADP octopine/nopaline dehydrogenase |
| 5554 | CP026928.1 | AVH45608.1 JB | 1203 [NA] | 400 [AA] | 100586-101788 | At1D1609_55760 | 2-amino-3-ketobutyrate CoA ligase |
| 5555 | CP026928.1 | AVH45609.1 JB | 975 [NA] | 324 [AA] | 101785-102759 | At1D1609_55770 | NAD-dependent epimerase |
| 5556 | CP026928.1 | AVH45610.1 JB | 231 [NA] | 76 [AA] | 102809-103039 | At1D1609_55780 | D-amino acid dehydrogenase |
| 5557 | CP026928.1 | AVH45611.1 JB | 675 [NA] | 224 [AA] | 103040-103714 | At1D1609_55790 | hypothetical protein |
| 5558 | CP026928.1 | AVH45612.1 JB | 3084 [NA] | 1027 [AA] | 103799-106882 | At1D1609_55800 | hemolysin |
| 5559 | CP026928.1 | AVH45613.1 JB | 1743 [NA] | 580 [AA] | 107124-108866 | At1D1609_55810 | type I secretion protein |
| 5560 | CP026928.1 | AVH45614.1 JB | 1311 [NA] | 436 [AA] | 108863-110173 | At1D1609_55820 | HlyD family secretion protein |
| 5561 | CP026928.1 | AVH45615.1 JB | 1008 [NA] | 335 [AA] | 110464-111471 | At1D1609_55830 | LacI family transcriptional regulator |
| 5562 | CP026928.1 | AVH45616.1 JB | 1239 [NA] | 412 [AA] | 111519-112757 | At1D1609_55840 | multiple sugar transport system substrate-binding protein |
| 5563 | CP026928.1 | AVH45617.1 JB | 918 [NA] | 305 [AA] | 112840-113757 | At1D1609_55850 | multiple sugar transport system permease protein |
| 5564 | CP026928.1 | AVH45618.1 JB | 879 [NA] | 292 [AA] | 113754-114632 | At1D1609_55860 | multiple sugar transport system permease protein |
| 5565 | CP026928.1 | AVH45619.1 JB | 1971 [NA] | 656 [AA] | 114632-116602 | At1D1609_55870 | hypothetical protein |
| 5566 | CP026928.1 | AVH45620.1 JB | 1140 [NA] | 379 [AA] | 116599-117738 | At1D1609_55880 | lactose/L-arabinose transport system ATP-binding protein |
| 5567 | CP026928.1 | AVH45621.1 JB | 978 [NA] | 325 [AA] | 118342-119319 | At1D1609_55890 | hypothetical protein |
| 5568 | CP026928.1 | AVH45622.1 JB | 1923 [NA] | 640 [AA] | 119631-121553 | At1D1609_55900 | methyl-accepting chemotaxis protein |
| 5569 | CP026928.1 | AVH45623.1 JB | 444 [NA] | 147 [AA] | 121592-122035 | At1D1609_55910 | purine-binding chemotaxis protein CheW |
| 5570 | CP026928.1 | AVH45624.1 JB | 900 [NA] | 299 [AA] | 122220-123119 | At1D1609_55920 | hypothetical protein |
| 5571 | CP026928.1 | AVH45625.1 JB | 186 [NA] | 61 [AA] | 124137-124322 | At1D1609_55930 | hypothetical protein |
| 5572 | CP026928.1 | AVH45626.1 JB | 948 [NA] | 315 [AA] | 125055-126002 | At1D1609_55940 | hypothetical protein |
| 5573 | CP026928.1 | AVH45627.1 JB | 963 [NA] | 320 [AA] | 126138-127100 | At1D1609_55950 | AraC family transcriptional regulator |
| 5574 | CP026928.1 | AVH45628.1 JB | 507 [NA] | 168 [AA] | 127343-127849 | At1D1609_55960 | hypothetical protein |
| 5575 | CP026928.1 | AVH45629.1 JB | 1362 [NA] | 453 [AA] | 127955-129316 | At1D1609_55970 | alkanesulfonate monooxygenase |
| 5576 | CP026928.1 | AVH45630.1 JB | 1356 [NA] | 451 [AA] | 129359-130714 | At1D1609_55980 | MFS transporter |
| 5577 | CP026928.1 | AVH45631.1 JB | 1470 [NA] | 489 [AA] | 130824-132293 | At1D1609_55990 | succinate-semialdehyde dehydrogenase |
| 5578 | CP026928.1 | AVH45632.1 JB | 903 [NA] | 300 [AA] | 132295-133197 | At1D1609_56000 | LysR family transcriptional regulator |
| 5579 | CP026928.1 | AVH45633.1 JB | 1179 [NA] | 392 [AA] | 133278-134456 | At1D1609_56010 | MFS transporter |
| 5580 | CP026928.1 | AVH45634.1 JB | 654 [NA] | 217 [AA] | 134505-135158 | At1D1609_56020 | 3,4-dihydroxy 2-butanone 4-phosphate synthase |
| 5581 | CP026928.1 | AVH45635.1 JB | 732 [NA] | 243 [AA] | 135842-136573 | At1D1609_56030 | cyclohexyl-isocyanide hydratase |
| 5582 | CP026928.1 | AVH45636.1 JB | 858 [NA] | 285 [AA] | 137287-138144 | At1D1609_56040 | hydroxylase |
| 5583 | CP026928.1 | AVH45637.1 JB | 378 [NA] | 125 [AA] | 138232-138609 | At1D1609_56045 | transcriptional regulator |
| 5584 | CP026928.1 | AVH45638.1 JB | 969 [NA] | 322 [AA] | 138715-139683 | At1D1609_56050 | AraC family transcriptional regulator |
| 5585 | CP026928.1 | AVH45639.1 JB | 543 [NA] | 180 [AA] | 139786-140328 | At1D1609_56060 | Isochorismatase |
| 5586 | CP026928.1 | AVH45640.1 JB | 873 [NA] | 290 [AA] | 140352-141224 | At1D1609_56070 | hypothetical protein |
| 5587 | CP026928.1 | AVH45641.1 JB | 429 [NA] | 142 [AA] | 141851-142279 | At1D1609_56080 | endoribonuclease L-PSP |
| 5588 | CP026928.1 | AVH45642.1 JB | 978 [NA] | 325 [AA] | 142444-143421 | At1D1609_56090 | AraC family transcriptional regulator |
| 5589 | CP026928.1 | AVH45643.1 JB | 906 [NA] | 301 [AA] | 144208-145113 | At1D1609_56100 | transposase |
| 5590 | CP026928.1 | AVH45644.1 JB | 330 [NA] | 109 [AA] | 145110-145439 | At1D1609_56110 | transposase |
| 5591 | CP026928.1 | AVH45645.1 JB | 177 [NA] | 58 [AA] | 146333-146509 | At1D1609_56120 | helicase |
| 5592 | CP026928.1 | AVH45646.1 JB | 1011 [NA] | 336 [AA] | 146733-147743 | At1D1609_56130 | hypothetical protein |
| 5593 | CP026928.1 | AVH45647.1 JB | 603 [NA] | 200 [AA] | 147805-148407 | At1D1609_56140 | hypothetical protein |
| 5594 | CP026928.1 | AVH45648.1 JB | 5085 [NA] | 1694 [AA] | 148499-153583 | At1D1609_56150 | lactate dehydrogenase |
| 5595 | CP026928.1 | AVH45649.1 JB | 1434 [NA] | 477 [AA] | 153788-155221 | At1D1609_56160 | hypothetical protein |
| 5596 | CP026928.1 | AVH45650.1 JB | 828 [NA] | 275 [AA] | 155205-156032 | At1D1609_56170 | hypothetical protein |
| 5597 | CP026928.1 | AVH45651.1 JB | 129 [NA] | 42 [AA] | 156112-156240 | At1D1609_56180 | hypothetical protein |
| 5598 | CP026928.1 | AVH45652.1 JB | 1722 [NA] | 573 [AA] | 156736-158457 | At1D1609_56190 | plasmid partitioning protein |
| 5599 | CP026928.1 | AVH45653.1 JB | 588 [NA] | 195 [AA] | 158997-159584 | At1D1609_56200 | hypothetical protein |
| 5600 | CP026928.1 | AVH45654.1 JB | 927 [NA] | 308 [AA] | 159870-160796 | At1D1609_56210 | antirestriction protein |
| 5601 | CP026928.1 | AVH45655.1 JB | 177 [NA] | 58 [AA] | 160811-160987 | At1D1609_56220 | hypothetical protein |
| 5602 | CP026928.1 | AVH45656.1 JB | 312 [NA] | 103 [AA] | 161443-161754 | At1D1609_56230 | hypothetical protein |
| 5603 | CP026928.1 | AVH45657.1 JB | 438 [NA] | 145 [AA] | 161892-162329 | At1D1609_56240 | hypothetical protein |
| 5604 | CP026928.1 | AVH45658.1 JB | 174 [NA] | 57 [AA] | 162883-163056 | At1D1609_56250 | hypothetical protein |
| 5605 | CP026928.1 | AVH45659.1 JB | 450 [NA] | 149 [AA] | 163090-163539 | At1D1609_56260 | nuclease |
| 5606 | CP026928.1 | AVH45660.1 JB | 261 [NA] | 86 [AA] | 163609-163869 | At1D1609_56270 | hypothetical protein |
| 5607 | CP026928.1 | AVH45661.1 JB | 789 [NA] | 262 [AA] | 164057-164845 | At1D1609_56280 | competence protein |
| 5608 | CP026928.1 | AVH45662.1 JB | 1908 [NA] | 635 [AA] | 165074-166981 | At1D1609_56290 | conjugal transfer protein TraG |
| 5609 | CP026928.1 | AVH45663.1 JB | 216 [NA] | 71 [AA] | 166968-167183 | At1D1609_56300 | conjugal transfer protein TraD |
| 5610 | CP026928.1 | AVH45664.1 JB | 309 [NA] | 102 [AA] | 167188-167496 | At1D1609_56310 | conjugal transfer protein TraC |
| 5611 | CP026928.1 | AVH45665.1 JB | 3327 [NA] | 1108 [AA] | 167751-171077 | At1D1609_56320 | conjugal transfer protein TraA |
| 5612 | CP026928.1 | AVH45666.1 JB | 543 [NA] | 180 [AA] | 171074-171616 | At1D1609_56330 | conjugal transfer protein TraF |
| 5613 | CP026928.1 | AVH45667.1 JB | 1164 [NA] | 387 [AA] | 171606-172769 | At1D1609_56340 | conjugal transfer protein TraB |
| 5614 | CP026928.1 | AVH45668.1 JB | 618 [NA] | 205 [AA] | 172786-173403 | At1D1609_56350 | conjugal transfer protein TraH |
| 5615 | CP026928.1 | AVH45669.1 JB | 1566 [NA] | 521 [AA] | 173635-175200 | At1D1609_56360 | hypothetical protein |
| 5616 | CP026928.1 | AVH45670.1 JB | 222 [NA] | 73 [AA] | 175314-175535 | At1D1609_56370 | transcriptional regulator |
| 5617 | CP026928.1 | AVH45671.1 JB | 321 [NA] | 106 [AA] | 175749-176069 | At1D1609_56380 | transcriptional regulator |
| 5618 | CP026928.1 | AVH45672.1 JB | 705 [NA] | 234 [AA] | 176073-176777 | At1D1609_56390 | transcriptional regulator |
| 5619 | CP026928.1 | AVH45673.1 JB | 1296 [NA] | 431 [AA] | 177099-178394 | At1D1609_56400 | conjugal transfer protein TrbI |
| 5620 | CP026928.1 | AVH45674.1 JB | 441 [NA] | 146 [AA] | 178406-178846 | At1D1609_56410 | conjugal transfer protein TrbH |
| 5621 | CP026928.1 | AVH45675.1 JB | 813 [NA] | 270 [AA] | 178850-179662 | At1D1609_56420 | conjugal transfer protein TrbG |
| 5622 | CP026928.1 | AVH45676.1 JB | 663 [NA] | 220 [AA] | 179680-180342 | At1D1609_56430 | conjugal transfer protein TrbF |
| 5623 | CP026928.1 | AVH45677.1 JB | 1182 [NA] | 393 [AA] | 180362-181543 | At1D1609_56440 | conjugal transfer protein TrbL |
| 5624 | CP026928.1 | AVH45678.1 JB | 201 [NA] | 66 [AA] | 181537-181737 | At1D1609_56450 | conjugal transfer protein TrbK |
| 5625 | CP026928.1 | AVH45679.1 JB | 804 [NA] | 267 [AA] | 181734-182537 | At1D1609_56460 | conjugal transfer protein TrbJ |
| 5626 | CP026928.1 | AVH45680.1 JB | 2457 [NA] | 818 [AA] | 182509-184965 | At1D1609_56470 | conjugal transfer protein TrbE |
| 5627 | CP026928.1 | AVH45681.1 JB | 300 [NA] | 99 [AA] | 184976-185275 | At1D1609_56480 | conjugal transfer protein TrbD |
| 5628 | CP026928.1 | AVH45682.1 JB | 384 [NA] | 127 [AA] | 185268-185651 | At1D1609_56490 | conjugal transfer protein TrbC |
| 5629 | CP026928.1 | AVH45683.1 JB | 978 [NA] | 325 [AA] | 185641-186618 | At1D1609_56500 | conjugal transfer protein TrbB |
| 5630 | CP026928.1 | AVH45684.1 JB | 624 [NA] | 207 [AA] | 186629-187252 | At1D1609_56510 | autoinducer synthesis protein |