Genome Explorer: Burkholderia cepacia BCC4135 (SEQF4088.1)
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PROKKA Annotation for SEQF4088.1
| Genome selected: Burkholderia cepacia BCC4135 | |||
| Contigs: | 434 | Bases: | 8641314 bps |
| CDS: | 7620 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 78 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 7501 | SEQF4088.1_JAACXU010000135.1 | SEQF4088.1_00835 JB | 795 [NA] | 264 [AA] | 5349-6143 | metQ_2 | D-methionine-binding lipoprotein MetQ |
| 7502 | SEQF4088.1_JAACXU010000136.1 | SEQF4088.1_00836 JB | 1542 [NA] | 513 [AA] | 662-2203 | sigA | RNA polymerase sigma factor SigA |
| 7503 | SEQF4088.1_JAACXU010000136.1 | SEQF4088.1_00837 JB | 882 [NA] | 293 [AA] | 2384-3265 | hypothetical protein | |
| 7504 | SEQF4088.1_JAACXU010000136.1 | SEQF4088.1_00838 JB | 819 [NA] | 272 [AA] | 3271-4089 | hypothetical protein | |
| 7505 | SEQF4088.1_JAACXU010000136.1 | SEQF4088.1_00839 JB | 426 [NA] | 141 [AA] | 4204-4629 | cueR_1 | HTH-type transcriptional regulator CueR |
| 7506 | SEQF4088.1_JAACXU010000136.1 | SEQF4088.1_00840 JB | 498 [NA] | 165 [AA] | 4770-5267 | hypothetical protein | |
| 7507 | SEQF4088.1_JAACXU010000136.1 | SEQF4088.1_00841 JB | 441 [NA] | 146 [AA] | 5538-5978 | marR | Multiple antibiotic resistance protein MarR |
| 7508 | SEQF4088.1_JAACXU010000137.1 | SEQF4088.1_00842 JB | 954 [NA] | 317 [AA] | 164-1117 | cmpR_1 | HTH-type transcriptional activator CmpR |
| 7509 | SEQF4088.1_JAACXU010000137.1 | SEQF4088.1_00843 JB | 1359 [NA] | 452 [AA] | 1218-2576 | ndh_1 | NADH dehydrogenase |
| 7510 | SEQF4088.1_JAACXU010000137.1 | SEQF4088.1_00844 JB | 435 [NA] | 144 [AA] | 2901-3335 | hypothetical protein | |
| 7511 | SEQF4088.1_JAACXU010000137.1 | SEQF4088.1_00845 JB | 1620 [NA] | 539 [AA] | 3515-5134 | hypothetical protein | |
| 7512 | SEQF4088.1_JAACXU010000137.1 | SEQF4088.1_00846 JB | 531 [NA] | 176 [AA] | 5225-5755 | hypothetical protein | |
| 7513 | SEQF4088.1_JAACXU010000138.1 | SEQF4088.1_00847 JB | 798 [NA] | 265 [AA] | 180-977 | fbiB | Bifunctional F420 biosynthesis protein FbiB |
| 7514 | SEQF4088.1_JAACXU010000138.1 | SEQF4088.1_00848 JB | 999 [NA] | 332 [AA] | 1157-2155 | ldhA | D-lactate dehydrogenase |
| 7515 | SEQF4088.1_JAACXU010000138.1 | SEQF4088.1_00849 JB | 984 [NA] | 327 [AA] | 2186-3169 | dmlR_5 | HTH-type transcriptional regulator DmlR |
| 7516 | SEQF4088.1_JAACXU010000138.1 | SEQF4088.1_00850 JB | 1389 [NA] | 462 [AA] | 3747-5135 | phnW_3 | 2-aminoethylphosphonate--pyruvate transaminase |
| 7517 | SEQF4088.1_JAACXU010000138.1 | SEQF4088.1_00851 JB | 675 [NA] | 224 [AA] | 5154-5828 | rhaR_2 | HTH-type transcriptional activator RhaR |
| 7518 | SEQF4088.1_JAACXU010000139.1 | SEQF4088.1_00852 JB | 699 [NA] | 232 [AA] | 138-836 | betI_2 | HTH-type transcriptional regulator BetI |
| 7519 | SEQF4088.1_JAACXU010000139.1 | SEQF4088.1_00853 JB | 975 [NA] | 324 [AA] | 833-1807 | hypothetical protein | |
| 7520 | SEQF4088.1_JAACXU010000139.1 | SEQF4088.1_00854 JB | 960 [NA] | 319 [AA] | 1804-2763 | ybhF | putative multidrug ABC transporter ATP-binding protein YbhF |
| 7521 | SEQF4088.1_JAACXU010000139.1 | SEQF4088.1_00855 JB | 1155 [NA] | 384 [AA] | 2760-3914 | ybhR | putative multidrug ABC transporter permease YbhR |
| 7522 | SEQF4088.1_JAACXU010000139.1 | SEQF4088.1_00856 JB | 1491 [NA] | 496 [AA] | 3925-5415 | ttgI | Toluene efflux pump outer membrane protein TtgI |
| 7523 | SEQF4088.1_JAACXU010000140.1 | SEQF4088.1_00979 JB | 1620 [NA] | 539 [AA] | 183-1802 | hypothetical protein | |
| 7524 | SEQF4088.1_JAACXU010000140.1 | SEQF4088.1_00980 JB | 765 [NA] | 254 [AA] | 2000-2764 | azoR_1 | FMN-dependent NADH-azoreductase |
| 7525 | SEQF4088.1_JAACXU010000140.1 | SEQF4088.1_00981 JB | 375 [NA] | 124 [AA] | 2839-3213 | hxlR | HTH-type transcriptional activator HxlR |
| 7526 | SEQF4088.1_JAACXU010000140.1 | SEQF4088.1_00982 JB | 1149 [NA] | 382 [AA] | 3279-4427 | mnmA | tRNA-specific 2-thiouridylase MnmA |
| 7527 | SEQF4088.1_JAACXU010000140.1 | SEQF4088.1_00983 JB | 510 [NA] | 169 [AA] | 4424-4933 | nudJ | Phosphatase NudJ |
| 7528 | SEQF4088.1_JAACXU010000140.1 | SEQF4088.1_00984 JB | 318 [NA] | 105 [AA] | 5238-5555 | nodD2 | Nodulation protein D 2 |
| 7529 | SEQF4088.1_JAACXU010000141.1 | SEQF4088.1_00986 JB | 1080 [NA] | 359 [AA] | 892-1971 | hypothetical protein | |
| 7530 | SEQF4088.1_JAACXU010000141.1 | SEQF4088.1_00987 JB | 141 [NA] | 46 [AA] | 2023-2163 | hypothetical protein | |
| 7531 | SEQF4088.1_JAACXU010000141.1 | SEQF4088.1_00988 JB | 939 [NA] | 312 [AA] | 2977-3915 | hypothetical protein | |
| 7532 | SEQF4088.1_JAACXU010000141.1 | SEQF4088.1_00989 JB | 657 [NA] | 218 [AA] | 3912-4568 | hypothetical protein | |
| 7533 | SEQF4088.1_JAACXU010000141.1 | SEQF4088.1_00990 JB | 432 [NA] | 143 [AA] | 4638-5069 | hypothetical protein | |
| 7534 | SEQF4088.1_JAACXU010000141.1 | SEQF4088.1_00991 JB | 285 [NA] | 94 [AA] | 5085-5369 | xerC_1 | Tyrosine recombinase XerC |
| 7535 | SEQF4088.1_JAACXU010000142.1 | SEQF4088.1_00992 JB | 813 [NA] | 270 [AA] | 312-1124 | hypothetical protein | |
| 7536 | SEQF4088.1_JAACXU010000142.1 | SEQF4088.1_00993 JB | 831 [NA] | 276 [AA] | 1378-2208 | hypothetical protein | |
| 7537 | SEQF4088.1_JAACXU010000142.1 | SEQF4088.1_00994 JB | 729 [NA] | 242 [AA] | 2513-3241 | hypothetical protein | |
| 7538 | SEQF4088.1_JAACXU010000142.1 | SEQF4088.1_00995 JB | 729 [NA] | 242 [AA] | 3501-4229 | hypothetical protein | |
| 7539 | SEQF4088.1_JAACXU010000142.1 | SEQF4088.1_00996 JB | 417 [NA] | 138 [AA] | 4490-4906 | hypothetical protein | |
| 7540 | SEQF4088.1_JAACXU010000143.1 | SEQF4088.1_00997 JB | 1392 [NA] | 463 [AA] | 664-2055 | frc_1 | Formyl-CoA:oxalate CoA-transferase |
| 7541 | SEQF4088.1_JAACXU010000143.1 | SEQF4088.1_00998 JB | 747 [NA] | 248 [AA] | 2077-2823 | nagR_1 | HTH-type transcriptional repressor NagR |
| 7542 | SEQF4088.1_JAACXU010000143.1 | SEQF4088.1_00999 JB | 846 [NA] | 281 [AA] | 2990-3835 | putative oxidoreductase | |
| 7543 | SEQF4088.1_JAACXU010000144.1 | SEQF4088.1_01000 JB | 651 [NA] | 216 [AA] | 39-689 | upp | Uracil phosphoribosyltransferase |
| 7544 | SEQF4088.1_JAACXU010000144.1 | SEQF4088.1_01001 JB | 729 [NA] | 242 [AA] | 908-1636 | pmpR | Transcriptional regulatory protein PmpR |
| 7545 | SEQF4088.1_JAACXU010000144.1 | SEQF4088.1_01002 JB | 1278 [NA] | 425 [AA] | 1741-3018 | purD_1 | Phosphoribosylamine--glycine ligase |
| 7546 | SEQF4088.1_JAACXU010000144.1 | SEQF4088.1_01003 JB | 921 [NA] | 306 [AA] | 3137-4057 | hemF | Oxygen-dependent coproporphyrinogen-III oxidase |
| 7547 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01004 JB | 192 [NA] | 63 [AA] | 44-235 | phaA_2 | Acetyl-CoA acetyltransferase |
| 7548 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01005 JB | 711 [NA] | 236 [AA] | 486-1196 | phaB_2 | Acetoacetyl-CoA reductase |
| 7549 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01006 JB | 207 [NA] | 68 [AA] | 1305-1511 | hypothetical protein | |
| 7550 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01007 JB | 291 [NA] | 96 [AA] | 1603-1893 | hypothetical protein | |
| 7551 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01008 JB | 504 [NA] | 167 [AA] | 1925-2428 | hypothetical protein | |
| 7552 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01009 JB | 816 [NA] | 271 [AA] | 2428-3243 | hypothetical protein | |
| 7553 | SEQF4088.1_JAACXU010000145.1 | SEQF4088.1_01010 JB | 432 [NA] | 143 [AA] | 3252-3683 | fabF_3 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 |
| 7554 | SEQF4088.1_JAACXU010000146.1 | SEQF4088.1_01011 JB | 1971 [NA] | 656 [AA] | 171-2141 | hypothetical protein | |
| 7555 | SEQF4088.1_JAACXU010000146.1 | SEQF4088.1_01012 JB | 159 [NA] | 52 [AA] | 2217-2375 | hypothetical protein | |
| 7556 | SEQF4088.1_JAACXU010000147.1 | SEQF4088.1_01013 JB | 1533 [NA] | 510 [AA] | 199-1731 | hypothetical protein | |
| 7557 | SEQF4088.1_JAACXU010000147.1 | SEQF4088.1_01014 JB | 789 [NA] | 262 [AA] | 1736-2524 | IS21 family transposase ISBmu1 | |
| 7558 | SEQF4088.1_JAACXU010000148.1 | SEQF4088.1_01015 JB | 732 [NA] | 243 [AA] | 1384-2115 | hypothetical protein | |
| 7559 | SEQF4088.1_JAACXU010000148.1 | SEQF4088.1_01016 JB | 471 [NA] | 156 [AA] | 2131-2601 | hypothetical protein | |
| 7560 | SEQF4088.1_JAACXU010000149.1 | SEQF4088.1_01017 JB | 735 [NA] | 244 [AA] | 919-1653 | ermC | rRNA adenine N-6-methyltransferase |
| 7561 | SEQF4088.1_JAACXU010000149.1 | SEQF4088.1_01018 JB | 138 [NA] | 45 [AA] | 2440-2577 | hypothetical protein | |
| 7562 | SEQF4088.1_JAACXU010000150.1 | SEQF4088.1_01133 JB | 1005 [NA] | 334 [AA] | 977-1981 | hypothetical protein | |
| 7563 | SEQF4088.1_JAACXU010000151.1 | SEQF4088.1_01134 JB | 780 [NA] | 259 [AA] | 204-983 | fabG_4 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG |
| 7564 | SEQF4088.1_JAACXU010000151.1 | SEQF4088.1_01135 JB | 393 [NA] | 130 [AA] | 1039-1431 | mgsA | Methylglyoxal synthase |
| 7565 | SEQF4088.1_JAACXU010000151.1 | SEQF4088.1_01136 JB | 666 [NA] | 221 [AA] | 1557-2222 | hypothetical protein | |
| 7566 | SEQF4088.1_JAACXU010000152.1 | SEQF4088.1_01137 JB | 945 [NA] | 314 [AA] | 135-1079 | repD | Replication initiation protein |
| 7567 | SEQF4088.1_JAACXU010000154.1 | SEQF4088.1_01139 JB | 489 [NA] | 162 [AA] | 12-500 | hypothetical protein | |
| 7568 | SEQF4088.1_JAACXU010000154.1 | SEQF4088.1_01140 JB | 156 [NA] | 51 [AA] | 676-831 | hypothetical protein | |
| 7569 | SEQF4088.1_JAACXU010000154.1 | SEQF4088.1_01141 JB | 480 [NA] | 159 [AA] | 1020-1499 | yycN | putative N-acetyltransferase YycN |
| 7570 | SEQF4088.1_JAACXU010000156.1 | SEQF4088.1_01142 JB | 258 [NA] | 85 [AA] | 596-853 | hypothetical protein | |
| 7571 | SEQF4088.1_JAACXU010000157.1 | SEQF4088.1_01143 JB | 837 [NA] | 278 [AA] | 34-870 | IS3 family transposase ISBmu6 | |
| 7572 | SEQF4088.1_JAACXU010000157.1 | SEQF4088.1_01144 JB | 525 [NA] | 174 [AA] | 870-1394 | IS3 family transposase ISBmu6 | |
| 7573 | SEQF4088.1_JAACXU010000158.1 | SEQF4088.1_01145 JB | 1323 [NA] | 440 [AA] | 11-1333 | IS4 family transposase ISCro3 | |
| 7574 | SEQF4088.1_JAACXU010000159.1 | SEQF4088.1_01146 JB | 924 [NA] | 307 [AA] | 135-1058 | hypothetical protein | |
| 7575 | SEQF4088.1_JAACXU010000160.1 | SEQF4088.1_01278 JB | 315 [NA] | 104 [AA] | 300-614 | hypothetical protein | |
| 7576 | SEQF4088.1_JAACXU010000160.1 | SEQF4088.1_01279 JB | 279 [NA] | 92 [AA] | 785-1063 | hypothetical protein | |
| 7577 | SEQF4088.1_JAACXU010000161.1 | SEQF4088.1_01280 JB | 993 [NA] | 330 [AA] | 87-1079 | IS5 family transposase ISBmu2 | |
| 7578 | SEQF4088.1_JAACXU010000162.1 | SEQF4088.1_01281 JB | 747 [NA] | 248 [AA] | 39-785 | hypothetical protein | |
| 7579 | SEQF4088.1_JAACXU010000163.1 | SEQF4088.1_01282 JB | 711 [NA] | 236 [AA] | 277-987 | IS110 family transposase ISBcen1 | |
| 7580 | SEQF4088.1_JAACXU010000164.1 | SEQF4088.1_01283 JB | 192 [NA] | 63 [AA] | 72-263 | hypothetical protein | |
| 7581 | SEQF4088.1_JAACXU010000164.1 | SEQF4088.1_01284 JB | 195 [NA] | 64 [AA] | 260-454 | hypothetical protein | |
| 7582 | SEQF4088.1_JAACXU010000164.1 | SEQF4088.1_01285 JB | 207 [NA] | 68 [AA] | 521-727 | hypothetical protein | |
| 7583 | SEQF4088.1_JAACXU010000166.1 | SEQF4088.1_01286 JB | 654 [NA] | 217 [AA] | 414-1067 | etfB_1 | Electron transfer flavoprotein subunit beta |
| 7584 | SEQF4088.1_JAACXU010000168.1 | SEQF4088.1_01287 JB | 951 [NA] | 316 [AA] | 1-951 | IS481 family transposase ISBcen26 | |
| 7585 | SEQF4088.1_JAACXU010000169.1 | SEQF4088.1_01288 JB | 705 [NA] | 234 [AA] | 301-1005 | fabG_6 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG |
| 7586 | SEQF4088.1_JAACXU010000170.1 | SEQF4088.1_01406 JB | 783 [NA] | 260 [AA] | 205-987 | hypothetical protein | |
| 7587 | SEQF4088.1_JAACXU010000171.1 | SEQF4088.1_01407 JB | 720 [NA] | 239 [AA] | 244-963 | potA_3 | Spermidineputrescine import ATP-binding protein PotA |
| 7588 | SEQF4088.1_JAACXU010000174.1 | SEQF4088.1_01408 JB | 648 [NA] | 215 [AA] | 30-677 | dauR_1 | Transcriptional regulator DauR |
| 7589 | SEQF4088.1_JAACXU010000179.1 | SEQF4088.1_01409 JB | 702 [NA] | 233 [AA] | 15-716 | lip2 | Lipase 2 |
| 7590 | SEQF4088.1_JAACXU010000185.1 | SEQF4088.1_01526 JB | 642 [NA] | 213 [AA] | 1-642 | glnQ_1 | Glutamine transport ATP-binding protein GlnQ |
| 7591 | SEQF4088.1_JAACXU010000188.1 | SEQF4088.1_01527 JB | 621 [NA] | 206 [AA] | 3-623 | hypothetical protein | |
| 7592 | SEQF4088.1_JAACXU010000190.1 | SEQF4088.1_01637 JB | 192 [NA] | 63 [AA] | 271-462 | hypothetical protein | |
| 7593 | SEQF4088.1_JAACXU010000221.1 | SEQF4088.1_02288 JB | 228 [NA] | 75 [AA] | 164-391 | atpE | ATP synthase subunit c |
| 7594 | SEQF4088.1_JAACXU010000229.1 | SEQF4088.1_02394 JB | 168 [NA] | 55 [AA] | 221-388 | hypothetical protein | |
| 7595 | SEQF4088.1_JAACXU010000231.1 | SEQF4088.1_02395 JB | 399 [NA] | 132 [AA] | 47-445 | fabG_8 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG |
| 7596 | SEQF4088.1_JAACXU010000249.1 | SEQF4088.1_02575 JB | 318 [NA] | 105 [AA] | 121-438 | argC_1 | N-acetyl-gamma-glutamyl-phosphate reductase |
| 7597 | SEQF4088.1_JAACXU010000253.1 | SEQF4088.1_02576 JB | 192 [NA] | 63 [AA] | 235-426 | cheZ_1 | Protein phosphatase CheZ |
| 7598 | SEQF4088.1_JAACXU010000256.1 | SEQF4088.1_02674 JB | 159 [NA] | 52 [AA] | 2-160 | hypothetical protein | |
| 7599 | SEQF4088.1_JAACXU010000273.1 | SEQF4088.1_02760 JB | 138 [NA] | 45 [AA] | 41-178 | hypothetical protein | |
| 7600 | SEQF4088.1_JAACXU010000276.1 | SEQF4088.1_02843 JB | 402 [NA] | 133 [AA] | 40-441 | hypothetical protein | |
| 7601 | SEQF4088.1_JAACXU010000279.1 | SEQF4088.1_02844 JB | 189 [NA] | 62 [AA] | 27-215 | hypothetical protein | |
| 7602 | SEQF4088.1_JAACXU010000281.1 | SEQF4088.1_02845 JB | 210 [NA] | 69 [AA] | 62-271 | rpsH_1 | 30S ribosomal protein S8 |
| 7603 | SEQF4088.1_JAACXU010000317.1 | SEQF4088.1_03477 JB | 243 [NA] | 80 [AA] | 135-377 | hypothetical protein | |
| 7604 | SEQF4088.1_JAACXU010000326.1 | SEQF4088.1_03565 JB | 237 [NA] | 78 [AA] | 130-366 | hypothetical protein | |
| 7605 | SEQF4088.1_JAACXU010000327.1 | SEQF4088.1_03566 JB | 174 [NA] | 57 [AA] | 13-186 | hypothetical protein | |
| 7606 | SEQF4088.1_JAACXU010000328.1 | SEQF4088.1_03567 JB | 387 [NA] | 128 [AA] | 34-420 | hypothetical protein | |
| 7607 | SEQF4088.1_JAACXU010000330.1 | SEQF4088.1_03568 JB | 261 [NA] | 86 [AA] | 145-405 | cysN_2 | Sulfate adenylyltransferase subunit 1 |
| 7608 | SEQF4088.1_JAACXU010000339.1 | SEQF4088.1_03645 JB | 240 [NA] | 79 [AA] | 165-404 | yscN | putative ATP synthase YscN |
| 7609 | SEQF4088.1_JAACXU010000347.1 | SEQF4088.1_03730 JB | 396 [NA] | 131 [AA] | 11-406 | yfmJ | Putative NADP-dependent oxidoreductase YfmJ |
| 7610 | SEQF4088.1_JAACXU010000358.1 | SEQF4088.1_03822 JB | 126 [NA] | 41 [AA] | 64-189 | hypothetical protein | |
| 7611 | SEQF4088.1_JAACXU010000365.1 | SEQF4088.1_03896 JB | 192 [NA] | 63 [AA] | 1-192 | hypothetical protein | |
| 7612 | SEQF4088.1_JAACXU010000372.1 | SEQF4088.1_03970 JB | 288 [NA] | 95 [AA] | 15-302 | hypothetical protein | |
| 7613 | SEQF4088.1_JAACXU010000382.1 | SEQF4088.1_04050 JB | 249 [NA] | 82 [AA] | 31-279 | hypothetical protein | |
| 7614 | SEQF4088.1_JAACXU010000384.1 | SEQF4088.1_04051 JB | 222 [NA] | 73 [AA] | 105-326 | hypothetical protein | |
| 7615 | SEQF4088.1_JAACXU010000385.1 | SEQF4088.1_04052 JB | 288 [NA] | 95 [AA] | 15-302 | hypothetical protein | |
| 7616 | SEQF4088.1_JAACXU010000396.1 | SEQF4088.1_04321 JB | 111 [NA] | 36 [AA] | 153-263 | hypothetical protein | |
| 7617 | SEQF4088.1_JAACXU010000399.1 | SEQF4088.1_04322 JB | 198 [NA] | 65 [AA] | 115-312 | hypothetical protein | |
| 7618 | SEQF4088.1_JAACXU010000401.1 | SEQF4088.1_04391 JB | 150 [NA] | 49 [AA] | 173-322 | hypothetical protein | |
| 7619 | SEQF4088.1_JAACXU010000418.1 | SEQF4088.1_04450 JB | 252 [NA] | 83 [AA] | 105-356 | hypothetical protein | |
| 7620 | SEQF4088.1_JAACXU010000422.1 | SEQF4088.1_04518 JB | 144 [NA] | 47 [AA] | 234-377 | hypothetical protein |