Genome Explorer: Lactobacillus plantarum WCFS1 (SEQF1965.3)
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PROKKA Annotation for SEQF1965.3
| Genome selected: Lactobacillus plantarum WCFS1 | |||
| Contigs: | 4 | Bases: | 3348624 bps |
| CDS: | 3123 | rRNA: | 16 |
| tmRNA: | 1 | tRNA: | 71 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 3001 | SEQF1965.3_AL935263.2 | SEQF1965.3_03126 JB | 1467 [NA] | 488 [AA] | 3212197-3213663 | rhaB | L-Rhamnulokinase |
| 3002 | SEQF1965.3_AL935263.2 | SEQF1965.3_03127 JB | 1329 [NA] | 442 [AA] | 3213663-3214991 | csbC_2 | putative metabolite transport protein CsbC |
| 3003 | SEQF1965.3_AL935263.2 | SEQF1965.3_03128 JB | 975 [NA] | 324 [AA] | 3215117-3216091 | rhaS_2 | HTH-type transcriptional activator RhaS |
| 3004 | SEQF1965.3_AL935263.2 | SEQF1965.3_03129 JB | 780 [NA] | 259 [AA] | 3216174-3216953 | ydjF | putative HTH-type transcriptional regulator YdjF |
| 3005 | SEQF1965.3_AL935263.2 | SEQF1965.3_03130 JB | 462 [NA] | 153 [AA] | 3217252-3217713 | hypothetical protein | |
| 3006 | SEQF1965.3_AL935263.2 | SEQF1965.3_03131 JB | 312 [NA] | 103 [AA] | 3217734-3218045 | hypothetical protein | |
| 3007 | SEQF1965.3_AL935263.2 | SEQF1965.3_03132 JB | 1551 [NA] | 516 [AA] | 3218082-3219632 | hypothetical protein | |
| 3008 | SEQF1965.3_AL935263.2 | SEQF1965.3_03133 JB | 288 [NA] | 95 [AA] | 3219629-3219916 | hypothetical protein | |
| 3009 | SEQF1965.3_AL935263.2 | SEQF1965.3_03134 JB | 723 [NA] | 240 [AA] | 3219913-3220635 | otnC | 3-oxo-tetronate 4-phosphate decarboxylase |
| 3010 | SEQF1965.3_AL935263.2 | SEQF1965.3_03135 JB | 1413 [NA] | 470 [AA] | 3220802-3222214 | iolT_1 | Major myo-inositol transporter IolT |
| 3011 | SEQF1965.3_AL935263.2 | SEQF1965.3_03136 JB | 1038 [NA] | 345 [AA] | 3222254-3223291 | iolG_1 | Myo-inositol 2-dehydrogenase |
| 3012 | SEQF1965.3_AL935263.2 | SEQF1965.3_03137 JB | 1053 [NA] | 350 [AA] | 3223327-3224379 | iolG_2 | Inositol 2-dehydrogenase |
| 3013 | SEQF1965.3_AL935263.2 | SEQF1965.3_03138 JB | 903 [NA] | 300 [AA] | 3224451-3225353 | iolE | Inosose dehydratase |
| 3014 | SEQF1965.3_AL935263.2 | SEQF1965.3_03139 JB | 1029 [NA] | 342 [AA] | 3225376-3226404 | iolG_3 | Myo-inositol 2-dehydrogenase |
| 3015 | SEQF1965.3_AL935263.2 | SEQF1965.3_03140 JB | 1467 [NA] | 488 [AA] | 3226734-3228200 | iolT_2 | Major myo-inositol transporter IolT |
| 3016 | SEQF1965.3_AL935263.2 | SEQF1965.3_03141 JB | 1026 [NA] | 341 [AA] | 3228248-3229273 | iolG_4 | Myo-inositol 2-dehydrogenase |
| 3017 | SEQF1965.3_AL935263.2 | SEQF1965.3_03142 JB | 465 [NA] | 154 [AA] | 3229297-3229761 | hypothetical protein | |
| 3018 | SEQF1965.3_AL935263.2 | SEQF1965.3_03143 JB | 933 [NA] | 310 [AA] | 3229780-3230712 | tdh_4 | L-threonine 3-dehydrogenase |
| 3019 | SEQF1965.3_AL935263.2 | SEQF1965.3_03144 JB | 936 [NA] | 311 [AA] | 3231043-3231978 | rihA_2 | Pyrimidine-specific ribonucleoside hydrolase RihA |
| 3020 | SEQF1965.3_AL935263.2 | SEQF1965.3_03145 JB | 690 [NA] | 229 [AA] | 3232378-3233067 | fsaA_2 | Fructose-6-phosphate aldolase 1 |
| 3021 | SEQF1965.3_AL935263.2 | SEQF1965.3_03146 JB | 375 [NA] | 124 [AA] | 3233093-3233467 | srlB_1 | PTS system glucitolsorbitol-specific EIIA component |
| 3022 | SEQF1965.3_AL935263.2 | SEQF1965.3_03147 JB | 1014 [NA] | 337 [AA] | 3233486-3234499 | srlE_1 | PTS system glucitolsorbitol-specific EIIB component |
| 3023 | SEQF1965.3_AL935263.2 | SEQF1965.3_03148 JB | 567 [NA] | 188 [AA] | 3234513-3235079 | srlA_1 | PTS system glucitolsorbitol-specific EIIC component |
| 3024 | SEQF1965.3_AL935263.2 | SEQF1965.3_03149 JB | 516 [NA] | 171 [AA] | 3235076-3235591 | hypothetical protein | |
| 3025 | SEQF1965.3_AL935263.2 | SEQF1965.3_03150 JB | 1857 [NA] | 618 [AA] | 3235592-3237448 | licR_1 | putative licABCH operon regulator |
| 3026 | SEQF1965.3_AL935263.2 | SEQF1965.3_03151 JB | 879 [NA] | 292 [AA] | 3237463-3238341 | bacC_4 | Dihydroanticapsin 7-dehydrogenase |
| 3027 | SEQF1965.3_AL935263.2 | SEQF1965.3_03152 JB | 1008 [NA] | 335 [AA] | 3238621-3239628 | ccpA_4 | Catabolite control protein A |
| 3028 | SEQF1965.3_AL935263.2 | SEQF1965.3_03153 JB | 1386 [NA] | 461 [AA] | 3239713-3241098 | hypothetical protein | |
| 3029 | SEQF1965.3_AL935263.2 | SEQF1965.3_03154 JB | 1677 [NA] | 558 [AA] | 3241117-3242793 | malL_5 | Oligo-1%2C6-glucosidase |
| 3030 | SEQF1965.3_AL935263.2 | SEQF1965.3_03155 JB | 1386 [NA] | 461 [AA] | 3242952-3244337 | gmuD | 6-phospho-beta-glucosidase GmuD |
| 3031 | SEQF1965.3_AL935263.2 | SEQF1965.3_03156 JB | 879 [NA] | 292 [AA] | 3244349-3245227 | bglK_3 | Beta-glucoside kinase |
| 3032 | SEQF1965.3_AL935263.2 | SEQF1965.3_03157 JB | 2700 [NA] | 899 [AA] | 3245227-3247926 | mngB | Mannosylglycerate hydrolase |
| 3033 | SEQF1965.3_AL935263.2 | SEQF1965.3_03158 JB | 1290 [NA] | 429 [AA] | 3247933-3249222 | hypothetical protein | |
| 3034 | SEQF1965.3_AL935263.2 | SEQF1965.3_03159 JB | 1065 [NA] | 354 [AA] | 3249370-3250434 | araR_2 | Arabinose metabolism transcriptional repressor |
| 3035 | SEQF1965.3_AL935263.2 | SEQF1965.3_03160 JB | 2148 [NA] | 715 [AA] | 3250440-3252587 | hypothetical protein | |
| 3036 | SEQF1965.3_AL935263.2 | SEQF1965.3_03161 JB | 1137 [NA] | 378 [AA] | 3252834-3253970 | msmX_3 | Oligosaccharides import ATP-binding protein MsmX |
| 3037 | SEQF1965.3_AL935263.2 | SEQF1965.3_03162 JB | 864 [NA] | 287 [AA] | 3254221-3255084 | gmuE_2 | Putative fructokinase |
| 3038 | SEQF1965.3_AL935263.2 | SEQF1965.3_03163 JB | 1461 [NA] | 486 [AA] | 3255180-3256640 | rhaR_6 | HTH-type transcriptional activator RhaR |
| 3039 | SEQF1965.3_AL935263.2 | SEQF1965.3_03164 JB | 1713 [NA] | 570 [AA] | 3256640-3258352 | hypothetical protein | |
| 3040 | SEQF1965.3_AL935263.2 | SEQF1965.3_03165 JB | 612 [NA] | 203 [AA] | 3258353-3258964 | hypothetical protein | |
| 3041 | SEQF1965.3_AL935263.2 | SEQF1965.3_03166 JB | 1626 [NA] | 541 [AA] | 3259037-3260662 | dexB | Glucan 1%2C6-alpha-glucosidase |
| 3042 | SEQF1965.3_AL935263.2 | SEQF1965.3_03167 JB | 1473 [NA] | 490 [AA] | 3260765-3262237 | hypothetical protein | |
| 3043 | SEQF1965.3_AL935263.2 | SEQF1965.3_03168 JB | 918 [NA] | 305 [AA] | 3262327-3263244 | araQ_2 | L-arabinose transport system permease protein AraQ |
| 3044 | SEQF1965.3_AL935263.2 | SEQF1965.3_03169 JB | 963 [NA] | 320 [AA] | 3263257-3264219 | yteP | putative multiple-sugar transport system permease YteP |
| 3045 | SEQF1965.3_AL935263.2 | SEQF1965.3_03170 JB | 1851 [NA] | 616 [AA] | 3264555-3266405 | hypothetical protein | |
| 3046 | SEQF1965.3_AL935263.2 | SEQF1965.3_03171 JB | 828 [NA] | 275 [AA] | 3266576-3267403 | rhaS_3 | HTH-type transcriptional activator RhaS |
| 3047 | SEQF1965.3_AL935263.2 | SEQF1965.3_03172 JB | 1749 [NA] | 582 [AA] | 3267532-3269280 | yheI_2 | putative multidrug resistance ABC transporter ATP-bindingpermease protein YheI |
| 3048 | SEQF1965.3_AL935263.2 | SEQF1965.3_03173 JB | 1791 [NA] | 596 [AA] | 3269282-3271072 | putative ABC transporter ATP-binding protein | |
| 3049 | SEQF1965.3_AL935263.2 | SEQF1965.3_03174 JB | 1050 [NA] | 349 [AA] | 3271302-3272351 | araR_3 | Arabinose metabolism transcriptional repressor |
| 3050 | SEQF1965.3_AL935263.2 | SEQF1965.3_03175 JB | 867 [NA] | 288 [AA] | 3272383-3273249 | lrp | Leucine-rich protein |
| 3051 | SEQF1965.3_AL935263.2 | SEQF1965.3_03176 JB | 378 [NA] | 125 [AA] | 3273499-3273876 | srlB_2 | PTS system glucitolsorbitol-specific EIIA component |
| 3052 | SEQF1965.3_AL935263.2 | SEQF1965.3_03177 JB | 1020 [NA] | 339 [AA] | 3273904-3274923 | srlE_2 | PTS system glucitolsorbitol-specific EIIB component |
| 3053 | SEQF1965.3_AL935263.2 | SEQF1965.3_03178 JB | 552 [NA] | 183 [AA] | 3274947-3275498 | srlA_2 | PTS system glucitolsorbitol-specific EIIC component |
| 3054 | SEQF1965.3_AL935263.2 | SEQF1965.3_03179 JB | 507 [NA] | 168 [AA] | 3275503-3276009 | hypothetical protein | |
| 3055 | SEQF1965.3_AL935263.2 | SEQF1965.3_03180 JB | 1866 [NA] | 621 [AA] | 3276009-3277874 | licR_2 | putative licABCH operon regulator |
| 3056 | SEQF1965.3_AL935263.2 | SEQF1965.3_03181 JB | 804 [NA] | 267 [AA] | 3277908-3278711 | bacC_5 | Dihydroanticapsin 7-dehydrogenase |
| 3057 | SEQF1965.3_AL935263.2 | SEQF1965.3_03182 JB | 885 [NA] | 294 [AA] | 3279016-3279900 | glcU_3 | Glucose uptake protein GlcU |
| 3058 | SEQF1965.3_AL935263.2 | SEQF1965.3_03183 JB | 396 [NA] | 131 [AA] | 3279930-3280325 | rbsD | D-ribose pyranase |
| 3059 | SEQF1965.3_AL935263.2 | SEQF1965.3_03184 JB | 921 [NA] | 306 [AA] | 3280328-3281248 | rbsK/rbiA | Bifunctional ribokinaseribose-5-phosphate isomerase A |
| 3060 | SEQF1965.3_AL935263.2 | SEQF1965.3_03185 JB | 999 [NA] | 332 [AA] | 3281352-3282350 | rbsR_2 | Ribose operon repressor |
| 3061 | SEQF1965.3_AL935263.2 | SEQF1965.3_03186 JB | 2604 [NA] | 867 [AA] | 3282610-3285213 | adhE_2 | Aldehyde-alcohol dehydrogenase |
| 3062 | SEQF1965.3_AL935263.2 | SEQF1965.3_03187 JB | 462 [NA] | 153 [AA] | 3285502-3285963 | hypothetical protein | |
| 3063 | SEQF1965.3_AL935263.2 | SEQF1965.3_03188 JB | 546 [NA] | 181 [AA] | 3286154-3286699 | hypothetical protein | |
| 3064 | SEQF1965.3_AL935263.2 | SEQF1965.3_03189 JB | 537 [NA] | 178 [AA] | 3286815-3287351 | padC | Phenolic acid decarboxylase PadC |
| 3065 | SEQF1965.3_AL935263.2 | SEQF1965.3_03190 JB | 801 [NA] | 266 [AA] | 3287513-3288313 | mhpD | 2-keto-4-pentenoate hydratase |
| 3066 | SEQF1965.3_AL935263.2 | SEQF1965.3_03191 JB | 483 [NA] | 160 [AA] | 3289085-3289567 | hypothetical protein | |
| 3067 | SEQF1965.3_AL935263.2 | SEQF1965.3_03192 JB | 867 [NA] | 288 [AA] | 3289725-3290591 | degV_3 | Protein DegV |
| 3068 | SEQF1965.3_AL935263.2 | SEQF1965.3_03193 JB | 423 [NA] | 140 [AA] | 3290690-3291112 | hypothetical protein | |
| 3069 | SEQF1965.3_AL935263.2 | SEQF1965.3_03194 JB | 1317 [NA] | 438 [AA] | 3291125-3292441 | pepE_2 | Aminopeptidase E |
| 3070 | SEQF1965.3_AL935263.2 | SEQF1965.3_03195 JB | 126 [NA] | 41 [AA] | 3292431-3292556 | hypothetical protein | |
| 3071 | SEQF1965.3_AL935263.2 | SEQF1965.3_03196 JB | 588 [NA] | 195 [AA] | 3292670-3293257 | spsB_3 | Signal peptidase IB |
| 3072 | SEQF1965.3_AL935263.2 | SEQF1965.3_03197 JB | 1539 [NA] | 512 [AA] | 3293466-3295004 | hypothetical protein | |
| 3073 | SEQF1965.3_AL935263.2 | SEQF1965.3_03198 JB | 342 [NA] | 113 [AA] | 3295024-3295365 | hypothetical protein | |
| 3074 | SEQF1965.3_AL935263.2 | SEQF1965.3_03199 JB | 1050 [NA] | 349 [AA] | 3295385-3296434 | hypothetical protein | |
| 3075 | SEQF1965.3_AL935263.2 | SEQF1965.3_03200 JB | 735 [NA] | 244 [AA] | 3296593-3297327 | hypothetical protein | |
| 3076 | SEQF1965.3_AL935263.2 | SEQF1965.3_03201 JB | 1911 [NA] | 636 [AA] | 3297586-3299496 | mnmG | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG |
| 3077 | SEQF1965.3_AL935263.2 | SEQF1965.3_03202 JB | 1392 [NA] | 463 [AA] | 3299515-3300906 | mnmE | tRNA modification GTPase MnmE |
| 3078 | SEQF1965.3_AL935263.2 | SEQF1965.3_03203 JB | 969 [NA] | 322 [AA] | 3301138-3302106 | hypothetical protein | |
| 3079 | SEQF1965.3_AL935263.2 | SEQF1965.3_03204 JB | 1254 [NA] | 417 [AA] | 3302592-3303845 | hutI | Imidazolonepropionase |
| 3080 | SEQF1965.3_AL935263.2 | SEQF1965.3_03205 JB | 1638 [NA] | 545 [AA] | 3303978-3305615 | oppA_3 | Oligopeptide-binding protein OppA |
| 3081 | SEQF1965.3_AL935263.2 | SEQF1965.3_03206 JB | 834 [NA] | 277 [AA] | 3306330-3307163 | misCA | Membrane protein insertase MisCA |
| 3082 | SEQF1965.3_AL935263.2 | SEQF1965.3_03207 JB | 345 [NA] | 114 [AA] | 3307179-3307523 | rnpA | Ribonuclease P protein component |
| 3083 | SEQF1965.3_CR377164.1 | SEQF1965.3_03208 JB | 960 [NA] | 319 [AA] | 163-1122 | hypothetical protein | |
| 3084 | SEQF1965.3_CR377165.1 | SEQF1965.3_03209 JB | 660 [NA] | 219 [AA] | 102-761 | repB | Replication protein RepB |
| 3085 | SEQF1965.3_CR377165.1 | SEQF1965.3_03210 JB | 441 [NA] | 146 [AA] | 953-1393 | hypothetical protein | |
| 3086 | SEQF1965.3_CR377166.1 | SEQF1965.3_03211 JB | 309 [NA] | 102 [AA] | 302-610 | hypothetical protein | |
| 3087 | SEQF1965.3_CR377166.1 | SEQF1965.3_03212 JB | 273 [NA] | 90 [AA] | 925-1197 | hypothetical protein | |
| 3088 | SEQF1965.3_CR377166.1 | SEQF1965.3_03213 JB | 801 [NA] | 266 [AA] | 2061-2861 | soj_2 | Sporulation initiation inhibitor protein Soj |
| 3089 | SEQF1965.3_CR377166.1 | SEQF1965.3_03214 JB | 351 [NA] | 116 [AA] | 2863-3213 | hypothetical protein | |
| 3090 | SEQF1965.3_CR377166.1 | SEQF1965.3_03215 JB | 555 [NA] | 184 [AA] | 3816-4370 | pinR | Serine recombinase PinR |
| 3091 | SEQF1965.3_CR377166.1 | SEQF1965.3_03218 JB | 360 [NA] | 119 [AA] | 5713-6072 | hypothetical protein | |
| 3092 | SEQF1965.3_CR377166.1 | SEQF1965.3_03219 JB | 363 [NA] | 120 [AA] | 6059-6421 | arsD | Arsenical resistance operon trans-acting repressor ArsD |
| 3093 | SEQF1965.3_CR377166.1 | SEQF1965.3_03220 JB | 1731 [NA] | 576 [AA] | 6505-8235 | arsA | Arsenical pump-driving ATPase |
| 3094 | SEQF1965.3_CR377166.1 | SEQF1965.3_03221 JB | 1296 [NA] | 431 [AA] | 8294-9589 | arsB | Arsenical pump membrane protein |
| 3095 | SEQF1965.3_CR377166.1 | SEQF1965.3_03222 JB | 330 [NA] | 109 [AA] | 9606-9935 | hypothetical protein | |
| 3096 | SEQF1965.3_CR377166.1 | SEQF1965.3_03223 JB | 300 [NA] | 99 [AA] | 9958-10257 | hypothetical protein | |
| 3097 | SEQF1965.3_CR377166.1 | SEQF1965.3_03224 JB | 1401 [NA] | 466 [AA] | 10281-11681 | npr_3 | NADH peroxidase |
| 3098 | SEQF1965.3_CR377166.1 | SEQF1965.3_03225 JB | 369 [NA] | 122 [AA] | 12031-12399 | hypothetical protein | |
| 3099 | SEQF1965.3_CR377166.1 | SEQF1965.3_03226 JB | 615 [NA] | 204 [AA] | 12401-13015 | hypothetical protein | |
| 3100 | SEQF1965.3_CR377166.1 | SEQF1965.3_03227 JB | 1032 [NA] | 343 [AA] | 13100-14131 | IS30 family transposase ISCth3 | |
| 3101 | SEQF1965.3_CR377166.1 | SEQF1965.3_03228 JB | 165 [NA] | 54 [AA] | 14240-14404 | hypothetical protein | |
| 3102 | SEQF1965.3_CR377166.1 | SEQF1965.3_03229 JB | 216 [NA] | 71 [AA] | 14408-14623 | hypothetical protein | |
| 3103 | SEQF1965.3_CR377166.1 | SEQF1965.3_03230 JB | 2136 [NA] | 711 [AA] | 14746-16881 | topB | DNA topoisomerase 3 |
| 3104 | SEQF1965.3_CR377166.1 | SEQF1965.3_03231 JB | 411 [NA] | 136 [AA] | 16888-17298 | hypothetical protein | |
| 3105 | SEQF1965.3_CR377166.1 | SEQF1965.3_03232 JB | 858 [NA] | 285 [AA] | 17313-18170 | hypothetical protein | |
| 3106 | SEQF1965.3_CR377166.1 | SEQF1965.3_03233 JB | 375 [NA] | 124 [AA] | 18176-18550 | hypothetical protein | |
| 3107 | SEQF1965.3_CR377166.1 | SEQF1965.3_03234 JB | 1512 [NA] | 503 [AA] | 18565-20076 | hypothetical protein | |
| 3108 | SEQF1965.3_CR377166.1 | SEQF1965.3_03235 JB | 471 [NA] | 156 [AA] | 20078-20548 | hypothetical protein | |
| 3109 | SEQF1965.3_CR377166.1 | SEQF1965.3_03236 JB | 369 [NA] | 122 [AA] | 20549-20917 | hypothetical protein | |
| 3110 | SEQF1965.3_CR377166.1 | SEQF1965.3_03237 JB | 618 [NA] | 205 [AA] | 20904-21521 | hypothetical protein | |
| 3111 | SEQF1965.3_CR377166.1 | SEQF1965.3_03238 JB | 1155 [NA] | 384 [AA] | 21536-22690 | hypothetical protein | |
| 3112 | SEQF1965.3_CR377166.1 | SEQF1965.3_03239 JB | 1419 [NA] | 472 [AA] | 22691-24109 | hypothetical protein | |
| 3113 | SEQF1965.3_CR377166.1 | SEQF1965.3_03240 JB | 2019 [NA] | 672 [AA] | 24102-26120 | hypothetical protein | |
| 3114 | SEQF1965.3_CR377166.1 | SEQF1965.3_03241 JB | 660 [NA] | 219 [AA] | 26132-26791 | hypothetical protein | |
| 3115 | SEQF1965.3_CR377166.1 | SEQF1965.3_03242 JB | 363 [NA] | 120 [AA] | 26760-27122 | hypothetical protein | |
| 3116 | SEQF1965.3_CR377166.1 | SEQF1965.3_03243 JB | 336 [NA] | 111 [AA] | 27143-27478 | hypothetical protein | |
| 3117 | SEQF1965.3_CR377166.1 | SEQF1965.3_03244 JB | 615 [NA] | 204 [AA] | 27480-28094 | hypothetical protein | |
| 3118 | SEQF1965.3_CR377166.1 | SEQF1965.3_03245 JB | 309 [NA] | 102 [AA] | 28133-28441 | hypothetical protein | |
| 3119 | SEQF1965.3_CR377166.1 | SEQF1965.3_03246 JB | 2070 [NA] | 689 [AA] | 28524-30593 | hypothetical protein | |
| 3120 | SEQF1965.3_CR377166.1 | SEQF1965.3_03247 JB | 210 [NA] | 69 [AA] | 30856-31065 | hypothetical protein | |
| 3121 | SEQF1965.3_CR377166.1 | SEQF1965.3_03248 JB | 279 [NA] | 92 [AA] | 31088-31366 | hypothetical protein | |
| 3122 | SEQF1965.3_CR377166.1 | SEQF1965.3_03249 JB | 588 [NA] | 195 [AA] | 31879-32466 | hin | DNA-invertase hin |
| 3123 | SEQF1965.3_CR377166.1 | SEQF1965.3_03250 JB | 2994 [NA] | 997 [AA] | 32645-35638 | Tn3 family transposase TnBth1 |