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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Burkholderia cepacia BCC4135 (SEQF4088.1)
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PROKKA Annotation for SEQF4088.1
Genome selected: Burkholderia cepacia BCC4135
Contigs:434 Bases:8641314 bps
CDS:7620 rRNA:4
tmRNA:1 tRNA:78
Annotation Table [page:16]
Number of Records Found: 7620 [16 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
7501 SEQF4088.1_JAACXU010000135.1 SEQF4088.1_00835 open 795 [NA] 264 [AA] 5349-6143 metQ_2 D-methionine-binding lipoprotein MetQ
7502 SEQF4088.1_JAACXU010000136.1 SEQF4088.1_00836 open 1542 [NA] 513 [AA] 662-2203 sigA RNA polymerase sigma factor SigA
7503 SEQF4088.1_JAACXU010000136.1 SEQF4088.1_00837 open 882 [NA] 293 [AA] 2384-3265 hypothetical protein
7504 SEQF4088.1_JAACXU010000136.1 SEQF4088.1_00838 open 819 [NA] 272 [AA] 3271-4089 hypothetical protein
7505 SEQF4088.1_JAACXU010000136.1 SEQF4088.1_00839 open 426 [NA] 141 [AA] 4204-4629 cueR_1 HTH-type transcriptional regulator CueR
7506 SEQF4088.1_JAACXU010000136.1 SEQF4088.1_00840 open 498 [NA] 165 [AA] 4770-5267 hypothetical protein
7507 SEQF4088.1_JAACXU010000136.1 SEQF4088.1_00841 open 441 [NA] 146 [AA] 5538-5978 marR Multiple antibiotic resistance protein MarR
7508 SEQF4088.1_JAACXU010000137.1 SEQF4088.1_00842 open 954 [NA] 317 [AA] 164-1117 cmpR_1 HTH-type transcriptional activator CmpR
7509 SEQF4088.1_JAACXU010000137.1 SEQF4088.1_00843 open 1359 [NA] 452 [AA] 1218-2576 ndh_1 NADH dehydrogenase
7510 SEQF4088.1_JAACXU010000137.1 SEQF4088.1_00844 open 435 [NA] 144 [AA] 2901-3335 hypothetical protein
7511 SEQF4088.1_JAACXU010000137.1 SEQF4088.1_00845 open 1620 [NA] 539 [AA] 3515-5134 hypothetical protein
7512 SEQF4088.1_JAACXU010000137.1 SEQF4088.1_00846 open 531 [NA] 176 [AA] 5225-5755 hypothetical protein
7513 SEQF4088.1_JAACXU010000138.1 SEQF4088.1_00847 open 798 [NA] 265 [AA] 180-977 fbiB Bifunctional F420 biosynthesis protein FbiB
7514 SEQF4088.1_JAACXU010000138.1 SEQF4088.1_00848 open 999 [NA] 332 [AA] 1157-2155 ldhA D-lactate dehydrogenase
7515 SEQF4088.1_JAACXU010000138.1 SEQF4088.1_00849 open 984 [NA] 327 [AA] 2186-3169 dmlR_5 HTH-type transcriptional regulator DmlR
7516 SEQF4088.1_JAACXU010000138.1 SEQF4088.1_00850 open 1389 [NA] 462 [AA] 3747-5135 phnW_3 2-aminoethylphosphonate--pyruvate transaminase
7517 SEQF4088.1_JAACXU010000138.1 SEQF4088.1_00851 open 675 [NA] 224 [AA] 5154-5828 rhaR_2 HTH-type transcriptional activator RhaR
7518 SEQF4088.1_JAACXU010000139.1 SEQF4088.1_00852 open 699 [NA] 232 [AA] 138-836 betI_2 HTH-type transcriptional regulator BetI
7519 SEQF4088.1_JAACXU010000139.1 SEQF4088.1_00853 open 975 [NA] 324 [AA] 833-1807 hypothetical protein
7520 SEQF4088.1_JAACXU010000139.1 SEQF4088.1_00854 open 960 [NA] 319 [AA] 1804-2763 ybhF putative multidrug ABC transporter ATP-binding protein YbhF
7521 SEQF4088.1_JAACXU010000139.1 SEQF4088.1_00855 open 1155 [NA] 384 [AA] 2760-3914 ybhR putative multidrug ABC transporter permease YbhR
7522 SEQF4088.1_JAACXU010000139.1 SEQF4088.1_00856 open 1491 [NA] 496 [AA] 3925-5415 ttgI Toluene efflux pump outer membrane protein TtgI
7523 SEQF4088.1_JAACXU010000140.1 SEQF4088.1_00979 open 1620 [NA] 539 [AA] 183-1802 hypothetical protein
7524 SEQF4088.1_JAACXU010000140.1 SEQF4088.1_00980 open 765 [NA] 254 [AA] 2000-2764 azoR_1 FMN-dependent NADH-azoreductase
7525 SEQF4088.1_JAACXU010000140.1 SEQF4088.1_00981 open 375 [NA] 124 [AA] 2839-3213 hxlR HTH-type transcriptional activator HxlR
7526 SEQF4088.1_JAACXU010000140.1 SEQF4088.1_00982 open 1149 [NA] 382 [AA] 3279-4427 mnmA tRNA-specific 2-thiouridylase MnmA
7527 SEQF4088.1_JAACXU010000140.1 SEQF4088.1_00983 open 510 [NA] 169 [AA] 4424-4933 nudJ Phosphatase NudJ
7528 SEQF4088.1_JAACXU010000140.1 SEQF4088.1_00984 open 318 [NA] 105 [AA] 5238-5555 nodD2 Nodulation protein D 2
7529 SEQF4088.1_JAACXU010000141.1 SEQF4088.1_00986 open 1080 [NA] 359 [AA] 892-1971 hypothetical protein
7530 SEQF4088.1_JAACXU010000141.1 SEQF4088.1_00987 open 141 [NA] 46 [AA] 2023-2163 hypothetical protein
7531 SEQF4088.1_JAACXU010000141.1 SEQF4088.1_00988 open 939 [NA] 312 [AA] 2977-3915 hypothetical protein
7532 SEQF4088.1_JAACXU010000141.1 SEQF4088.1_00989 open 657 [NA] 218 [AA] 3912-4568 hypothetical protein
7533 SEQF4088.1_JAACXU010000141.1 SEQF4088.1_00990 open 432 [NA] 143 [AA] 4638-5069 hypothetical protein
7534 SEQF4088.1_JAACXU010000141.1 SEQF4088.1_00991 open 285 [NA] 94 [AA] 5085-5369 xerC_1 Tyrosine recombinase XerC
7535 SEQF4088.1_JAACXU010000142.1 SEQF4088.1_00992 open 813 [NA] 270 [AA] 312-1124 hypothetical protein
7536 SEQF4088.1_JAACXU010000142.1 SEQF4088.1_00993 open 831 [NA] 276 [AA] 1378-2208 hypothetical protein
7537 SEQF4088.1_JAACXU010000142.1 SEQF4088.1_00994 open 729 [NA] 242 [AA] 2513-3241 hypothetical protein
7538 SEQF4088.1_JAACXU010000142.1 SEQF4088.1_00995 open 729 [NA] 242 [AA] 3501-4229 hypothetical protein
7539 SEQF4088.1_JAACXU010000142.1 SEQF4088.1_00996 open 417 [NA] 138 [AA] 4490-4906 hypothetical protein
7540 SEQF4088.1_JAACXU010000143.1 SEQF4088.1_00997 open 1392 [NA] 463 [AA] 664-2055 frc_1 Formyl-CoA:oxalate CoA-transferase
7541 SEQF4088.1_JAACXU010000143.1 SEQF4088.1_00998 open 747 [NA] 248 [AA] 2077-2823 nagR_1 HTH-type transcriptional repressor NagR
7542 SEQF4088.1_JAACXU010000143.1 SEQF4088.1_00999 open 846 [NA] 281 [AA] 2990-3835 putative oxidoreductase
7543 SEQF4088.1_JAACXU010000144.1 SEQF4088.1_01000 open 651 [NA] 216 [AA] 39-689 upp Uracil phosphoribosyltransferase
7544 SEQF4088.1_JAACXU010000144.1 SEQF4088.1_01001 open 729 [NA] 242 [AA] 908-1636 pmpR Transcriptional regulatory protein PmpR
7545 SEQF4088.1_JAACXU010000144.1 SEQF4088.1_01002 open 1278 [NA] 425 [AA] 1741-3018 purD_1 Phosphoribosylamine--glycine ligase
7546 SEQF4088.1_JAACXU010000144.1 SEQF4088.1_01003 open 921 [NA] 306 [AA] 3137-4057 hemF Oxygen-dependent coproporphyrinogen-III oxidase
7547 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01004 open 192 [NA] 63 [AA] 44-235 phaA_2 Acetyl-CoA acetyltransferase
7548 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01005 open 711 [NA] 236 [AA] 486-1196 phaB_2 Acetoacetyl-CoA reductase
7549 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01006 open 207 [NA] 68 [AA] 1305-1511 hypothetical protein
7550 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01007 open 291 [NA] 96 [AA] 1603-1893 hypothetical protein
7551 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01008 open 504 [NA] 167 [AA] 1925-2428 hypothetical protein
7552 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01009 open 816 [NA] 271 [AA] 2428-3243 hypothetical protein
7553 SEQF4088.1_JAACXU010000145.1 SEQF4088.1_01010 open 432 [NA] 143 [AA] 3252-3683 fabF_3 3-oxoacyl-[acyl-carrier-protein] synthase 2
7554 SEQF4088.1_JAACXU010000146.1 SEQF4088.1_01011 open 1971 [NA] 656 [AA] 171-2141 hypothetical protein
7555 SEQF4088.1_JAACXU010000146.1 SEQF4088.1_01012 open 159 [NA] 52 [AA] 2217-2375 hypothetical protein
7556 SEQF4088.1_JAACXU010000147.1 SEQF4088.1_01013 open 1533 [NA] 510 [AA] 199-1731 hypothetical protein
7557 SEQF4088.1_JAACXU010000147.1 SEQF4088.1_01014 open 789 [NA] 262 [AA] 1736-2524 IS21 family transposase ISBmu1
7558 SEQF4088.1_JAACXU010000148.1 SEQF4088.1_01015 open 732 [NA] 243 [AA] 1384-2115 hypothetical protein
7559 SEQF4088.1_JAACXU010000148.1 SEQF4088.1_01016 open 471 [NA] 156 [AA] 2131-2601 hypothetical protein
7560 SEQF4088.1_JAACXU010000149.1 SEQF4088.1_01017 open 735 [NA] 244 [AA] 919-1653 ermC rRNA adenine N-6-methyltransferase
7561 SEQF4088.1_JAACXU010000149.1 SEQF4088.1_01018 open 138 [NA] 45 [AA] 2440-2577 hypothetical protein
7562 SEQF4088.1_JAACXU010000150.1 SEQF4088.1_01133 open 1005 [NA] 334 [AA] 977-1981 hypothetical protein
7563 SEQF4088.1_JAACXU010000151.1 SEQF4088.1_01134 open 780 [NA] 259 [AA] 204-983 fabG_4 3-oxoacyl-[acyl-carrier-protein] reductase FabG
7564 SEQF4088.1_JAACXU010000151.1 SEQF4088.1_01135 open 393 [NA] 130 [AA] 1039-1431 mgsA Methylglyoxal synthase
7565 SEQF4088.1_JAACXU010000151.1 SEQF4088.1_01136 open 666 [NA] 221 [AA] 1557-2222 hypothetical protein
7566 SEQF4088.1_JAACXU010000152.1 SEQF4088.1_01137 open 945 [NA] 314 [AA] 135-1079 repD Replication initiation protein
7567 SEQF4088.1_JAACXU010000154.1 SEQF4088.1_01139 open 489 [NA] 162 [AA] 12-500 hypothetical protein
7568 SEQF4088.1_JAACXU010000154.1 SEQF4088.1_01140 open 156 [NA] 51 [AA] 676-831 hypothetical protein
7569 SEQF4088.1_JAACXU010000154.1 SEQF4088.1_01141 open 480 [NA] 159 [AA] 1020-1499 yycN putative N-acetyltransferase YycN
7570 SEQF4088.1_JAACXU010000156.1 SEQF4088.1_01142 open 258 [NA] 85 [AA] 596-853 hypothetical protein
7571 SEQF4088.1_JAACXU010000157.1 SEQF4088.1_01143 open 837 [NA] 278 [AA] 34-870 IS3 family transposase ISBmu6
7572 SEQF4088.1_JAACXU010000157.1 SEQF4088.1_01144 open 525 [NA] 174 [AA] 870-1394 IS3 family transposase ISBmu6
7573 SEQF4088.1_JAACXU010000158.1 SEQF4088.1_01145 open 1323 [NA] 440 [AA] 11-1333 IS4 family transposase ISCro3
7574 SEQF4088.1_JAACXU010000159.1 SEQF4088.1_01146 open 924 [NA] 307 [AA] 135-1058 hypothetical protein
7575 SEQF4088.1_JAACXU010000160.1 SEQF4088.1_01278 open 315 [NA] 104 [AA] 300-614 hypothetical protein
7576 SEQF4088.1_JAACXU010000160.1 SEQF4088.1_01279 open 279 [NA] 92 [AA] 785-1063 hypothetical protein
7577 SEQF4088.1_JAACXU010000161.1 SEQF4088.1_01280 open 993 [NA] 330 [AA] 87-1079 IS5 family transposase ISBmu2
7578 SEQF4088.1_JAACXU010000162.1 SEQF4088.1_01281 open 747 [NA] 248 [AA] 39-785 hypothetical protein
7579 SEQF4088.1_JAACXU010000163.1 SEQF4088.1_01282 open 711 [NA] 236 [AA] 277-987 IS110 family transposase ISBcen1
7580 SEQF4088.1_JAACXU010000164.1 SEQF4088.1_01283 open 192 [NA] 63 [AA] 72-263 hypothetical protein
7581 SEQF4088.1_JAACXU010000164.1 SEQF4088.1_01284 open 195 [NA] 64 [AA] 260-454 hypothetical protein
7582 SEQF4088.1_JAACXU010000164.1 SEQF4088.1_01285 open 207 [NA] 68 [AA] 521-727 hypothetical protein
7583 SEQF4088.1_JAACXU010000166.1 SEQF4088.1_01286 open 654 [NA] 217 [AA] 414-1067 etfB_1 Electron transfer flavoprotein subunit beta
7584 SEQF4088.1_JAACXU010000168.1 SEQF4088.1_01287 open 951 [NA] 316 [AA] 1-951 IS481 family transposase ISBcen26
7585 SEQF4088.1_JAACXU010000169.1 SEQF4088.1_01288 open 705 [NA] 234 [AA] 301-1005 fabG_6 3-oxoacyl-[acyl-carrier-protein] reductase FabG
7586 SEQF4088.1_JAACXU010000170.1 SEQF4088.1_01406 open 783 [NA] 260 [AA] 205-987 hypothetical protein
7587 SEQF4088.1_JAACXU010000171.1 SEQF4088.1_01407 open 720 [NA] 239 [AA] 244-963 potA_3 Spermidineputrescine import ATP-binding protein PotA
7588 SEQF4088.1_JAACXU010000174.1 SEQF4088.1_01408 open 648 [NA] 215 [AA] 30-677 dauR_1 Transcriptional regulator DauR
7589 SEQF4088.1_JAACXU010000179.1 SEQF4088.1_01409 open 702 [NA] 233 [AA] 15-716 lip2 Lipase 2
7590 SEQF4088.1_JAACXU010000185.1 SEQF4088.1_01526 open 642 [NA] 213 [AA] 1-642 glnQ_1 Glutamine transport ATP-binding protein GlnQ
7591 SEQF4088.1_JAACXU010000188.1 SEQF4088.1_01527 open 621 [NA] 206 [AA] 3-623 hypothetical protein
7592 SEQF4088.1_JAACXU010000190.1 SEQF4088.1_01637 open 192 [NA] 63 [AA] 271-462 hypothetical protein
7593 SEQF4088.1_JAACXU010000221.1 SEQF4088.1_02288 open 228 [NA] 75 [AA] 164-391 atpE ATP synthase subunit c
7594 SEQF4088.1_JAACXU010000229.1 SEQF4088.1_02394 open 168 [NA] 55 [AA] 221-388 hypothetical protein
7595 SEQF4088.1_JAACXU010000231.1 SEQF4088.1_02395 open 399 [NA] 132 [AA] 47-445 fabG_8 3-oxoacyl-[acyl-carrier-protein] reductase FabG
7596 SEQF4088.1_JAACXU010000249.1 SEQF4088.1_02575 open 318 [NA] 105 [AA] 121-438 argC_1 N-acetyl-gamma-glutamyl-phosphate reductase
7597 SEQF4088.1_JAACXU010000253.1 SEQF4088.1_02576 open 192 [NA] 63 [AA] 235-426 cheZ_1 Protein phosphatase CheZ
7598 SEQF4088.1_JAACXU010000256.1 SEQF4088.1_02674 open 159 [NA] 52 [AA] 2-160 hypothetical protein
7599 SEQF4088.1_JAACXU010000273.1 SEQF4088.1_02760 open 138 [NA] 45 [AA] 41-178 hypothetical protein
7600 SEQF4088.1_JAACXU010000276.1 SEQF4088.1_02843 open 402 [NA] 133 [AA] 40-441 hypothetical protein
7601 SEQF4088.1_JAACXU010000279.1 SEQF4088.1_02844 open 189 [NA] 62 [AA] 27-215 hypothetical protein
7602 SEQF4088.1_JAACXU010000281.1 SEQF4088.1_02845 open 210 [NA] 69 [AA] 62-271 rpsH_1 30S ribosomal protein S8
7603 SEQF4088.1_JAACXU010000317.1 SEQF4088.1_03477 open 243 [NA] 80 [AA] 135-377 hypothetical protein
7604 SEQF4088.1_JAACXU010000326.1 SEQF4088.1_03565 open 237 [NA] 78 [AA] 130-366 hypothetical protein
7605 SEQF4088.1_JAACXU010000327.1 SEQF4088.1_03566 open 174 [NA] 57 [AA] 13-186 hypothetical protein
7606 SEQF4088.1_JAACXU010000328.1 SEQF4088.1_03567 open 387 [NA] 128 [AA] 34-420 hypothetical protein
7607 SEQF4088.1_JAACXU010000330.1 SEQF4088.1_03568 open 261 [NA] 86 [AA] 145-405 cysN_2 Sulfate adenylyltransferase subunit 1
7608 SEQF4088.1_JAACXU010000339.1 SEQF4088.1_03645 open 240 [NA] 79 [AA] 165-404 yscN putative ATP synthase YscN
7609 SEQF4088.1_JAACXU010000347.1 SEQF4088.1_03730 open 396 [NA] 131 [AA] 11-406 yfmJ Putative NADP-dependent oxidoreductase YfmJ
7610 SEQF4088.1_JAACXU010000358.1 SEQF4088.1_03822 open 126 [NA] 41 [AA] 64-189 hypothetical protein
7611 SEQF4088.1_JAACXU010000365.1 SEQF4088.1_03896 open 192 [NA] 63 [AA] 1-192 hypothetical protein
7612 SEQF4088.1_JAACXU010000372.1 SEQF4088.1_03970 open 288 [NA] 95 [AA] 15-302 hypothetical protein
7613 SEQF4088.1_JAACXU010000382.1 SEQF4088.1_04050 open 249 [NA] 82 [AA] 31-279 hypothetical protein
7614 SEQF4088.1_JAACXU010000384.1 SEQF4088.1_04051 open 222 [NA] 73 [AA] 105-326 hypothetical protein
7615 SEQF4088.1_JAACXU010000385.1 SEQF4088.1_04052 open 288 [NA] 95 [AA] 15-302 hypothetical protein
7616 SEQF4088.1_JAACXU010000396.1 SEQF4088.1_04321 open 111 [NA] 36 [AA] 153-263 hypothetical protein
7617 SEQF4088.1_JAACXU010000399.1 SEQF4088.1_04322 open 198 [NA] 65 [AA] 115-312 hypothetical protein
7618 SEQF4088.1_JAACXU010000401.1 SEQF4088.1_04391 open 150 [NA] 49 [AA] 173-322 hypothetical protein
7619 SEQF4088.1_JAACXU010000418.1 SEQF4088.1_04450 open 252 [NA] 83 [AA] 105-356 hypothetical protein
7620 SEQF4088.1_JAACXU010000422.1 SEQF4088.1_04518 open 144 [NA] 47 [AA] 234-377 hypothetical protein