HOMD ::species::Neisseria subflava

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16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Neisseria subflava

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Full Lineage: Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria subflava

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From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

No Notes

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.980	1.274	0.058	0.153	0.310	0.684	0.275	0.433	1.027	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.301	1.978	0.083	0.456	0.622	2.298	0.385	0.295	0.200	0.000
Stdev	3.242	4.666	0.262	0.428	0.872	1.858	1.139	1.697	4.110	0.000
Prev	28.571	37.662	16.883	35.065	33.766	37.662	29.870	24.675	23.377	0.000

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to N. flavescens, N. perflava, and N. subflava were assigned one-third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	STO
Avg	0.223	0.332	0.087	0.571	1.492	1.409	1.712	1.594	3.409	0.000
10^thp	0.000	0.000	0.000	0.019	0.060	0.092	0.026	0.023	0.060	0.000
90^thp	0.738	1.100	0.280	1.396	3.537	3.692	4.480	5.078	8.972	0.000
Stdev	0.472	0.591	0.189	0.736	1.818	1.647	2.376	2.048	3.784	0.000
Prev	64.865	77.027	58.108	94.595	95.946	97.297	95.946	94.595	95.946	0.699

From: Dewhirst 35x9 data (not published yet)

Notes:

Reads equally close to HMT 101, 476, and 610 were assigned one third to each taxon.

percent abundance

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	ANA
Avg	0.164	0.189	0.082	0.555	0.173	0.245	0.065	0.068	0.094	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.001	0.000	0.001	0.000
90^thp	0.312	0.149	0.205	0.687	0.443	0.640	0.150	0.103	0.190	0.000
Stdev	0.510	0.699	0.201	1.696	0.237	0.528	0.105	0.124	0.218	0.001
Prev	62.162	76.471	76.744	85.714	85.714	86.000	90.909	87.097	90.000	5.000