HOME
Taxonomy
Taxon Table
Life Pages
Ecology (Abundance)
Dynamic Tree
Rank Level and Counts
Download Taxonomy Data
Taxonomy Version History
Genomes
Genome Table
CRISPR-Cas
JBrowse Genome Viewer Tool
Genomic Trees
»
Conserved Protein Tree
Ribosomal Protein Tree
16S rRNA Gene Tree
Genome Explorer and Annotations
BLAST Against All Genomes
BLAST Against One Genome
Anvi-server
(
BETA
)
Download Genomic Data
HOMD Reference Genome Version History
Proteomes
View Genomic Tree based on Conserved Proteins
All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
RefSeq BLAST Server
Old 16S BLAST
View 16S rRNA RefSeq Phylogenetic Tree
Download RefSeq Data
Version History
Animal Microbiomes
Mouse (MOMD)
Downloads
Download Batch HOMD Data
HOMD FTP Site
Resources
Old HOMD Site (v2)
Posters
Publications
Oralgen
»
www.oralgen.org Archive
Oralgen Genome Info
HOMD FTP Site
HOMD-v2
[Page-Help]
HOMD Help Content
How to Cite HOMD
Project Description
Strains and DNA Availability
People
Publications
Contact Us
Announcements
Search Help
16S rRNA RefSeq:
V15.23
Genomic RefSeq:
V10.1
Genome Table
There are 8622 genomes representing 568 taxa (Including 'NonOralRef' and 'Dropped' Taxa).
Download this Genome Data
:
[Browser]
[Text]
[Excel]
Genus by Alphabet:
[
All
]
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Y
|
Z
Reset Filters
Find Genomes by Phylum:
Select a Phylum
Absconditabacteria_(SR1)
Actinobacteria
Bacteroidetes
Chlamydiae
Chlorobi
Chloroflexi
Cyanobacteria
Euryarchaeota
Firmicutes
Fusobacteria
Gracilibacteria_(GN02)
Ignavibacteriae
Lentisphaerae
Proteobacteria
Saccharibacteria_(TM7)
Spirochaetes
Synergistetes
Tenericutes
WPS-2
Clear
Paging:
On
Off
(500 rows / page)
Search This Table:
All Fields
Seq-ID
Taxon-ID
Genus
Species
Strain
Isolation Origin
Sequence Status
Submitter
Clear
Sort Column
:
SEQ-ID
Taxon-ID
Genus/Species
Species
Strain
Contigs
Length
GC
Reverse
Submit
Number of Records Found: 49 Showing: 49
SEQ-ID
TaxID
Genus
Species
Strain/Culture
Contigs
Combined
Length
GC(%)
Genome Info and Tools
Annotations
SEQF7859.2
HMT-938
Limosilactobacillus
reuteri
clade_938
ATCC 53608
3
2,091,243
38.75
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7860.1
HMT-938
Limosilactobacillus
reuteri
clade_938
M2021619
1
2,229,645
39.07
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7861.1
HMT-938
Limosilactobacillus
reuteri
clade_938
RTR
1
1,986,363
38.89
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7862.1
HMT-938
Limosilactobacillus
reuteri
clade_938
SKKU-OGDONS-01
1
2,259,968
38.86
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7863.1
HMT-938
Limosilactobacillus
reuteri
clade_938
1B
2
2,272,714
38.93
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7864.2
HMT-938
Limosilactobacillus
reuteri
clade_938
I49
1
2,044,771
38.76
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7865.1
HMT-938
Limosilactobacillus
reuteri
clade_938
19-E-3
1
1,947,745
39.0
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7866.1
HMT-938
Limosilactobacillus
reuteri
clade_938
CNEI-KCA3
1
2,085,667
39.43
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7867.1
HMT-938
Limosilactobacillus
reuteri
clade_938
AN417
5
2,162,818
38.95
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7868.1
HMT-938
Limosilactobacillus
reuteri
clade_938
SD-LRE2-IT
1
2,313,802
38.8
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7869.1
HMT-938
Limosilactobacillus
reuteri
clade_938
SD-RD830-FR
1
2,076,814
38.92
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7870.1
HMT-938
Limosilactobacillus
reuteri
clade_938
ZLR003
1
2,234,097
38.66
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7871.1
HMT-938
Limosilactobacillus
reuteri
clade_938
EFEL6901
1
1,972,516
38.9
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7872.1
HMT-938
Limosilactobacillus
reuteri
clade_938
YSJL-12
3
2,151,788
38.93
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7873.1
HMT-938
Limosilactobacillus
reuteri
clade_938
ATG-F4
1
2,041,516
38.89
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7874.1
HMT-938
Limosilactobacillus
reuteri
clade_938
DS0384
2
2,243,237
39.04
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7875.1
HMT-938
Limosilactobacillus
reuteri
clade_938
Byun-re-01
1
2,244,514
38.88
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7876.1
HMT-938
Limosilactobacillus
reuteri
clade_938
VHProbi E18
1
2,040,678
38.88
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7877.1
HMT-938
Limosilactobacillus
reuteri
clade_938
IRT
1
1,993,967
38.9
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7878.1
HMT-938
Limosilactobacillus
reuteri
clade_938
LL7
2
2,384,717
38.81
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7879.1
HMT-938
Limosilactobacillus
reuteri
clade_938
YLR001
4
2,439,358
38.66
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7880.1
HMT-938
Limosilactobacillus
reuteri
clade_938
19-E-6
1
1,947,772
39.0
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7881.1
HMT-938
Limosilactobacillus
reuteri
clade_938
TK-F8A
1
2,038,911
38.88
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7882.1
HMT-938
Limosilactobacillus
reuteri
clade_938
VHProbi M07
1
2,041,530
38.89
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7883.1
HMT-938
Limosilactobacillus
reuteri
clade_938
WHH1689
1
2,044,184
39.31
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7884.1
HMT-938
Limosilactobacillus
reuteri
clade_938
L8
1
2,050,876
39.0
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7885.1
HMT-938
Limosilactobacillus
reuteri
clade_938
CNI-KCA2
1
2,072,001
38.92
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7886.1
HMT-938
Limosilactobacillus
reuteri
clade_938
3630
5
2,399,145
38.69
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7887.1
HMT-938
Limosilactobacillus
reuteri
clade_938
I49
1
2,063,624
38.75
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7888.1
HMT-938
Limosilactobacillus
reuteri
clade_938
3632
7
2,483,413
38.54
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7889.1
HMT-938
Limosilactobacillus
reuteri
clade_938
GQ_1_3_1
165
2,254,387
38.71
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7890.1
HMT-938
Limosilactobacillus
reuteri
clade_938
LTM_Jesus_5_1
135
2,368,786
38.41
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7891.1
HMT-938
Limosilactobacillus
reuteri
clade_938
PTA5_F11
126
1,934,301
38.77
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7892.1
HMT-938
Limosilactobacillus
reuteri
clade_938
LMG P-27481
134
2,016,419
38.77
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7893.1
HMT-938
Limosilactobacillus
reuteri
clade_938
Marseille-P5460
1
2,039,540
49.68
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7894.1
HMT-938
Limosilactobacillus
reuteri
clade_938
LR11
204
2,365,809
38.17
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7895.1
HMT-938
Limosilactobacillus
reuteri
clade_938
AP1
270
2,234,554
38.62
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7896.1
HMT-938
Limosilactobacillus
reuteri
clade_938
11B
220
2,182,531
38.79
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7897.1
HMT-938
Limosilactobacillus
reuteri
clade_938
Z2
250
2,041,738
39.05
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7898.1
HMT-938
Limosilactobacillus
reuteri
clade_938
103v
109
2,191,465
38.3
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7899.1
HMT-938
Limosilactobacillus
reuteri
clade_938
PTA6_F1
219
2,092,540
38.89
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7900.1
HMT-938
Limosilactobacillus
reuteri
clade_938
PM_Patrick_6_1
124
2,159,483
38.5
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7901.1
HMT-938
Limosilactobacillus
reuteri
clade_938
I49
3
2,063,604
38.75
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7902.1
HMT-938
Limosilactobacillus
reuteri
clade_938
MR2
228
2,018,659
38.6
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7903.1
HMT-938
Limosilactobacillus
reuteri
clade_938
KLR2001
149
2,110,569
38.53
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7904.1
HMT-938
Limosilactobacillus
reuteri
clade_938
PM_Patrick_1_1
117
2,162,028
38.5
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7905.1
HMT-938
Limosilactobacillus
reuteri
clade_938
An769
387
2,139,010
38.75
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7906.1
HMT-938
Limosilactobacillus
reuteri
clade_938
PTA6_C2
191
2,041,920
38.87
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI
SEQF7907.1
HMT-938
Limosilactobacillus
reuteri
clade_938
Z6
258
1,946,071
38.8
Taxon Info
Genome Info
Genome Viewer
PROKKA
NCBI