Genome Explorer: Agrobacterium tumefaciens LBA4404 (SEQF8772.1)
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NCBI Annotation for SEQF8772.1
| Genome selected: Agrobacterium tumefaciens LBA4404 | |||
| Contigs: | 39 | Bases: | 5615031 bps |
| CDS: | 5129 | rRNA: | 3 |
| tmRNA: | 0 | tRNA: | 45 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 5001 | JMKN01000028.1 | KEY49741.1 JB | 303 [NA] | 100 [AA] | 243-545 | EN41_11385 | hypothetical protein |
| 5002 | JMKN01000028.1 | KEY49742.1 JB | 774 [NA] | 257 [AA] | 1212-1985 | EN41_11395 | ABC transporter ATP-binding protein |
| 5003 | JMKN01000028.1 | KEY49743.1 JB | 1158 [NA] | 385 [AA] | 1998-3155 | EN41_11400 | amino acid ABC transporter permease |
| 5004 | JMKN01000028.1 | KEY49744.1 JB | 1197 [NA] | 398 [AA] | 3158-4354 | EN41_11405 | amino acid ABC transporter permease |
| 5005 | JMKN01000028.1 | KEY49745.1 JB | 1023 [NA] | 340 [AA] | 4464-5486 | EN41_11410 | amino acid ABC transporter substrate-bindnig protein |
| 5006 | JMKN01000028.1 | KEY49746.1 JB | 1188 [NA] | 395 [AA] | 5864-7051 | EN41_11415 | cystathionine beta-lyase |
| 5007 | JMKN01000028.1 | KEY49747.1 JB | 1182 [NA] | 393 [AA] | 7061-8242 | EN41_11420 | salicylate hydroxylase |
| 5008 | JMKN01000028.1 | KEY49748.1 JB | 246 [NA] | 81 [AA] | 8272-8517 | EN41_11425 | hypothetical protein |
| 5009 | JMKN01000028.1 | KEY49749.1 JB | 777 [NA] | 258 [AA] | 8688-9464 | EN41_11435 | alpha/beta hydrolase |
| 5010 | JMKN01000028.1 | KEY49750.1 JB | 825 [NA] | 274 [AA] | 9665-10489 | EN41_11445 | serine acetyltransferase |
| 5011 | JMKN01000028.1 | KEY49751.1 JB | 204 [NA] | 67 [AA] | 10610-10813 | EN41_11450 | hypothetical protein |
| 5012 | JMKN01000028.1 | KEY49752.1 JB | 1395 [NA] | 464 [AA] | 10869-12263 | EN41_11455 | cytochrome P450 |
| 5013 | JMKN01000028.1 | KEY49753.1 JB | 663 [NA] | 220 [AA] | 12379-13041 | EN41_11460 | TetR family transcriptional regulator |
| 5014 | JMKN01000028.1 | KEY49754.1 JB | 1191 [NA] | 396 [AA] | 13129-14319 | EN41_11465 | aldehyde dismutase |
| 5015 | JMKN01000028.1 | KEY49755.1 JB | 603 [NA] | 200 [AA] | 14810-15412 | EN41_11470 | serine acetyltransferase |
| 5016 | JMKN01000028.1 | KEY49756.1 JB | 873 [NA] | 290 [AA] | 15418-16290 | EN41_11475 | ATPase AAA |
| 5017 | JMKN01000028.1 | KEY49757.1 JB | 348 [NA] | 115 [AA] | 16498-16845 | EN41_11480 | preprotein translocase |
| 5018 | JMKN01000028.1 | KEY49758.1 JB | 2574 [NA] | 857 [AA] | 16928-19501 | EN41_11485 | preprotein translocase subunit SecD/SecF |
| 5019 | JMKN01000028.1 | KEY49759.1 JB | 393 [NA] | 130 [AA] | 19501-19893 | EN41_11490 | membrane protein |
| 5020 | JMKN01000028.1 | KEY49760.1 JB | 846 [NA] | 281 [AA] | 19917-20762 | EN41_11495 | phytoene synthase |
| 5021 | JMKN01000028.1 | KEY49761.1 JB | 459 [NA] | 152 [AA] | 20886-21344 | EN41_11500 | hypothetical protein |
| 5022 | JMKN01000028.1 | KEY49762.1 JB | 936 [NA] | 311 [AA] | 21356-22291 | EN41_11505 | membrane protein |
| 5023 | JMKN01000028.1 | KEY49763.1 JB | 1068 [NA] | 355 [AA] | 22363-23430 | EN41_11510 | hydroxyacid dehydrogenase |
| 5024 | JMKN01000028.1 | KEY49764.1 JB | 732 [NA] | 243 [AA] | 23497-24228 | EN41_11515 | lipoate--protein ligase |
| 5025 | JMKN01000028.1 | KEY49765.1 JB | 426 [NA] | 141 [AA] | 25067-25492 | EN41_11525 | hypothetical protein |
| 5026 | JMKN01000028.1 | KEY49766.1 JB | 429 [NA] | 142 [AA] | 25853-26281 | EN41_11535 | stress-induced protein |
| 5027 | JMKN01000028.1 | KEY49767.1 JB | 495 [NA] | 164 [AA] | 26285-26779 | EN41_11540 | peptide deformylase |
| 5028 | JMKN01000028.1 | KEY49768.1 JB | 327 [NA] | 108 [AA] | 26796-27122 | EN41_11545 | hypothetical protein |
| 5029 | JMKN01000028.1 | KEY49769.1 JB | 2301 [NA] | 766 [AA] | 27112-29412 | EN41_11550 | CbbBc protein |
| 5030 | JMKN01000028.1 | KEY49770.1 JB | 1428 [NA] | 475 [AA] | 29805-31232 | EN41_11555 | magnesium transporter |
| 5031 | JMKN01000028.1 | KEY49771.1 JB | 387 [NA] | 128 [AA] | 31304-31690 | EN41_11560 | MerR family transcriptional regulator |
| 5032 | JMKN01000028.1 | KEY49772.1 JB | 966 [NA] | 321 [AA] | 31875-32840 | EN41_11565 | membrane protein |
| 5033 | JMKN01000028.1 | KEY49773.1 JB | 693 [NA] | 230 [AA] | 32934-33626 | EN41_11570 | membrane protein |
| 5034 | JMKN01000028.1 | KEY49774.1 JB | 189 [NA] | 62 [AA] | 33941-34129 | EN41_11580 | hypothetical protein |
| 5035 | JMKN01000028.1 | KEY49775.1 JB | 522 [NA] | 173 [AA] | 34128-34649 | EN41_11585 | cobalamin biosynthesis protein |
| 5036 | JMKN01000028.1 | KEY49776.1 JB | 2076 [NA] | 691 [AA] | 34705-36780 | EN41_11590 | mechanosensitive ion channel protein |
| 5037 | JMKN01000028.1 | KEY49777.1 JB | 618 [NA] | 205 [AA] | 36777-37394 | EN41_11595 | chromosome partitioning protein ParB |
| 5038 | JMKN01000028.1 | KEY49778.1 JB | 1614 [NA] | 537 [AA] | 37391-39004 | EN41_11600 | sulfate permease |
| 5039 | JMKN01000028.1 | KEY49779.1 JB | 1623 [NA] | 540 [AA] | 39350-40972 | EN41_11605 | peptidase S41 |
| 5040 | JMKN01000028.1 | KEY49780.1 JB | 732 [NA] | 243 [AA] | 40983-41714 | EN41_11610 | peptidase S41 |
| 5041 | JMKN01000028.1 | KEY49781.1 JB | 153 [NA] | 50 [AA] | 41727-41879 | EN41_11615 | nitrogen fixation protein FixQ |
| 5042 | JMKN01000028.1 | KEY49782.1 JB | 864 [NA] | 287 [AA] | 41883-42746 | EN41_11620 | cytochrome Cbb3 |
| 5043 | JMKN01000028.1 | KEY49783.1 JB | 447 [NA] | 148 [AA] | 42795-43241 | EN41_11625 | glyoxalase |
| 5044 | JMKN01000028.1 | KEY49784.1 JB | 357 [NA] | 118 [AA] | 43258-43614 | EN41_11630 | bleomycin resistance protein |
| 5045 | JMKN01000028.1 | KEY49785.1 JB | 405 [NA] | 134 [AA] | 43626-44030 | EN41_11635 | polyketide cyclase |
| 5046 | JMKN01000028.1 | KEY49786.1 JB | 1584 [NA] | 527 [AA] | 44151-45734 | EN41_11640 | nitrogen fixation protein FixG |
| 5047 | JMKN01000028.1 | KEY49787.1 JB | 501 [NA] | 166 [AA] | 45731-46231 | EN41_11645 | cation transporter |
| 5048 | JMKN01000028.1 | KEY49788.1 JB | 2292 [NA] | 763 [AA] | 46228-48519 | EN41_11650 | nitrogen fixation protein FixI |
| 5049 | JMKN01000028.1 | KEY49789.1 JB | 162 [NA] | 53 [AA] | 48516-48677 | EN41_11655 | cytochrome oxidase maturation protein Cbb3 |
| 5050 | JMKN01000028.1 | KEY49790.1 JB | 1431 [NA] | 476 [AA] | 48829-50259 | EN41_11660 | 6-phosphogluconate dehydrogenase |
| 5051 | JMKN01000028.1 | KEY49791.1 JB | 327 [NA] | 108 [AA] | 50326-50652 | EN41_11665 | membrane protein |
| 5052 | JMKN01000028.1 | KEY49792.1 JB | 1032 [NA] | 343 [AA] | 50844-51875 | EN41_11670 | L-glyceraldehyde 3-phosphate reductase |
| 5053 | JMKN01000028.1 | KEY49793.1 JB | 2499 [NA] | 832 [AA] | 51979-54477 | EN41_11675 | beta-mannosidase |
| 5054 | JMKN01000028.1 | KEY49794.1 JB | 1053 [NA] | 350 [AA] | 54966-56018 | EN41_11680 | LacI family transcriptional regulator |
| 5055 | JMKN01000028.1 | KEY49795.1 JB | 990 [NA] | 329 [AA] | 56040-57029 | EN41_11685 | zinc transporter |
| 5056 | JMKN01000028.1 | KEY49796.1 JB | 900 [NA] | 299 [AA] | 57134-58033 | EN41_11690 | zinc ABC transporter ATP-binding protein |
| 5057 | JMKN01000028.1 | KEY49797.1 JB | 819 [NA] | 272 [AA] | 58026-58844 | EN41_11695 | membrane protein |
| 5058 | JMKN01000028.1 | KEY49798.1 JB | 414 [NA] | 137 [AA] | 58841-59254 | EN41_11700 | Fur family transcriptional regulator |
| 5059 | JMKN01000028.1 | KEY49799.1 JB | 531 [NA] | 176 [AA] | 59297-59827 | EN41_11705 | acetyltransferase |
| 5060 | JMKN01000028.1 | KEY49800.1 JB | 690 [NA] | 229 [AA] | 59859-60548 | EN41_11710 | 5-carboxymethyl-2-hydroxymuconate isomerase |
| 5061 | JMKN01000028.1 | KEY49801.1 JB | 1011 [NA] | 336 [AA] | 60687-61697 | EN41_11715 | tRNA-dihydrouridine synthase A |
| 5062 | JMKN01000028.1 | KEY49802.1 JB | 801 [NA] | 266 [AA] | 61704-62504 | EN41_11720 | hypothetical protein |
| 5063 | JMKN01000028.1 | KEY49803.1 JB | 2922 [NA] | 973 [AA] | 62558-65479 | EN41_11725 | excinuclease ABC subunit A |
| 5064 | JMKN01000028.1 | KEY49804.1 JB | 522 [NA] | 173 [AA] | 65786-66307 | EN41_11730 | single-stranded DNA-binding protein |
| 5065 | JMKN01000028.1 | KEY49805.1 JB | 267 [NA] | 88 [AA] | 66398-66664 | EN41_11735 | addiction module antitoxin |
| 5066 | JMKN01000028.1 | KEY49806.1 JB | 291 [NA] | 96 [AA] | 66657-66947 | EN41_11740 | plasmid stabilization protein |
| 5067 | JMKN01000028.1 | KEY49807.1 JB | 1149 [NA] | 382 [AA] | 66989-68137 | EN41_11745 | membrane protein |
| 5068 | JMKN01000028.1 | KEY49808.1 JB | 630 [NA] | 209 [AA] | 68270-68899 | EN41_11750 | MarC family transcriptional regulator |
| 5069 | JMKN01000028.1 | KEY49809.1 JB | 2793 [NA] | 930 [AA] | 69117-71909 | EN41_11755 | DNA gyrase subunit A |
| 5070 | JMKN01000028.1 | KEY49810.1 JB | 261 [NA] | 86 [AA] | 72006-72266 | EN41_11760 | hypothetical protein |
| 5071 | JMKN01000028.1 | KEY49811.1 JB | 1425 [NA] | 474 [AA] | 72350-73774 | EN41_11765 | D-alanyl-D-alanine carboxypeptidase |
| 5072 | JMKN01000028.1 | KEY49812.1 JB | 720 [NA] | 239 [AA] | 73988-74707 | EN41_11770 | membrane protein |
| 5073 | JMKN01000028.1 | KEY49813.1 JB | 264 [NA] | 87 [AA] | 74845-75108 | EN41_11775 | hypothetical protein |
| 5074 | JMKN01000028.1 | KEY49814.1 JB | 228 [NA] | 75 [AA] | 75124-75351 | EN41_11780 | hypothetical protein |
| 5075 | JMKN01000028.1 | KEY49815.1 JB | 345 [NA] | 114 [AA] | 76169-76513 | EN41_11795 | hypothetical protein |
| 5076 | JMKN01000028.1 | KEY49816.1 JB | 1089 [NA] | 362 [AA] | 76842-77930 | EN41_11800 | hypothetical protein |
| 5077 | JMKN01000028.1 | KEY49817.1 JB | 1173 [NA] | 390 [AA] | 78004-79176 | EN41_11805 | D-alanyl-D-alanine carboxypeptidase |
| 5078 | JMKN01000028.1 | KEY49818.1 JB | 675 [NA] | 224 [AA] | 79308-79982 | EN41_11810 | thymidylate kinase |
| 5079 | JMKN01000028.1 | KEY49819.1 JB | 1026 [NA] | 341 [AA] | 79975-81000 | EN41_11815 | DNA polymerase III subunit delta' |
| 5080 | JMKN01000028.1 | KEY49820.1 JB | 1551 [NA] | 516 [AA] | 81112-82662 | EN41_11820 | methionine--tRNA ligase |
| 5081 | JMKN01000028.1 | KEY49821.1 JB | 783 [NA] | 260 [AA] | 82673-83455 | EN41_11825 | LuxR family transcriptional regulator |
| 5082 | JMKN01000028.1 | KEY49822.1 JB | 825 [NA] | 274 [AA] | 83458-84282 | EN41_11830 | PhnP |
| 5083 | JMKN01000028.1 | KEY49823.1 JB | 1782 [NA] | 593 [AA] | 84383-86164 | EN41_11835 | chloride channel protein |
| 5084 | JMKN01000028.1 | KEY49824.1 JB | 354 [NA] | 117 [AA] | 86299-86652 | EN41_11840 | ArsR family transcriptional regulator |
| 5085 | JMKN01000028.1 | KEY49825.1 JB | 1059 [NA] | 352 [AA] | 86783-87841 | EN41_11850 | arsenic transporter |
| 5086 | JMKN01000028.1 | KEY49826.1 JB | 423 [NA] | 140 [AA] | 87844-88266 | EN41_11855 | arsenate reductase |
| 5087 | JMKN01000028.1 | KEY49827.1 JB | 726 [NA] | 241 [AA] | 88244-88969 | EN41_11860 | NADPH-dependent FMN reductase |
| 5088 | JMKN01000030.1 | KEY49600.1 JB | 1311 [NA] | 436 [AA] | 873-2183 | EN41_19165 | oxidoreductase |
| 5089 | JMKN01000030.1 | KEY49601.1 JB | 1146 [NA] | 381 [AA] | 2483-3628 | EN41_19170 | alanine racemase |
| 5090 | JMKN01000030.1 | KEY49602.1 JB | 945 [NA] | 314 [AA] | 3639-4583 | EN41_19175 | ornithine cyclodeaminase |
| 5091 | JMKN01000030.1 | KEY49603.1 JB | 1458 [NA] | 485 [AA] | 4601-6058 | EN41_19180 | aldehyde dehydrogenase |
| 5092 | JMKN01000030.1 | KEY49604.1 JB | 915 [NA] | 304 [AA] | 6061-6975 | EN41_19185 | LysR family transcriptional regulator |
| 5093 | JMKN01000030.1 | KEY49605.1 JB | 1329 [NA] | 442 [AA] | 7161-8489 | EN41_19190 | D-amino acid oxidase |
| 5094 | JMKN01000030.1 | KEY49606.1 JB | 999 [NA] | 332 [AA] | 8624-9622 | EN41_19195 | hydroxyproline-2-epimerase |
| 5095 | JMKN01000030.1 | KEY49607.1 JB | 852 [NA] | 283 [AA] | 9650-10501 | EN41_19200 | ABC transporter permease |
| 5096 | JMKN01000030.1 | KEY49608.1 JB | 849 [NA] | 282 [AA] | 10498-11346 | EN41_19205 | ABC transporter permease |
| 5097 | JMKN01000030.1 | KEY49609.1 JB | 1080 [NA] | 359 [AA] | 11360-12439 | EN41_19210 | glycine/betaine ABC transporter |
| 5098 | JMKN01000030.1 | KEY49610.1 JB | 852 [NA] | 283 [AA] | 12538-13389 | EN41_19215 | glycine/betaine ABC transporter |
| 5099 | JMKN01000030.1 | KEY49611.1 JB | 1347 [NA] | 448 [AA] | 13468-14814 | EN41_19220 | oxidoreductase |
| 5100 | JMKN01000030.1 | KEY49612.1 JB | 1518 [NA] | 505 [AA] | 14811-16328 | EN41_19225 | aldehyde dehydrogenase |
| 5101 | JMKN01000030.1 | KEY49613.1 JB | 912 [NA] | 303 [AA] | 16321-17232 | EN41_19230 | dihydrodipicolinate synthetase |
| 5102 | JMKN01000030.1 | KEY49614.1 JB | 711 [NA] | 236 [AA] | 17229-17939 | EN41_19235 | GntR family transcriptional regulator |
| 5103 | JMKN01000030.1 | KEY49615.1 JB | 918 [NA] | 305 [AA] | 18470-19387 | EN41_19240 | calcium-binding protein |
| 5104 | JMKN01000030.1 | KEY49616.1 JB | 714 [NA] | 237 [AA] | 19420-20133 | EN41_19245 | GntR family transcriptional regulator |
| 5105 | JMKN01000030.1 | KEY49617.1 JB | 1053 [NA] | 350 [AA] | 20237-21289 | EN41_19250 | oxidoreductase |
| 5106 | JMKN01000030.1 | KEY49618.1 JB | 1017 [NA] | 338 [AA] | 21282-22298 | EN41_19255 | oxidoreductase |
| 5107 | JMKN01000030.1 | KEY49619.1 JB | 1074 [NA] | 357 [AA] | 22295-23368 | EN41_19260 | oxidoreductase |
| 5108 | JMKN01000030.1 | KEY49620.1 JB | 1272 [NA] | 423 [AA] | 23391-24662 | EN41_19265 | ABC transporter substrate-binding protein |
| 5109 | JMKN01000030.1 | KEY49621.1 JB | 969 [NA] | 322 [AA] | 24720-25688 | EN41_19270 | sugar ABC transporter permease |
| 5110 | JMKN01000030.1 | KEY49622.1 JB | 1044 [NA] | 347 [AA] | 25681-26724 | EN41_19275 | ABC transporter permease |
| 5111 | JMKN01000030.1 | KEY49623.1 JB | 1080 [NA] | 359 [AA] | 26747-27826 | EN41_19280 | sugar ABC transporter ATP-binding protein |
| 5112 | JMKN01000030.1 | KEY49624.1 JB | 1725 [NA] | 574 [AA] | 27864-29588 | EN41_19285 | dihydroxy-acid dehydratase |
| 5113 | JMKN01000030.1 | KEY49625.1 JB | 798 [NA] | 265 [AA] | 29598-30395 | EN41_19290 | NAD-dependent dehydratase |
| 5114 | JMKN01000030.1 | KEY49626.1 JB | 711 [NA] | 236 [AA] | 30429-31139 | EN41_19295 | hypothetical protein |
| 5115 | JMKN01000030.1 | KEY49627.1 JB | 5196 [NA] | 1731 [AA] | 31248-36443 | EN41_19300 | ice nucleation-like protein |
| 5116 | JMKN01000030.1 | KEY49628.1 JB | 1158 [NA] | 385 [AA] | 36659-37816 | EN41_19305 | UDP-galactopyranose mutase |
| 5117 | JMKN01000030.1 | KEY49629.1 JB | 2046 [NA] | 681 [AA] | 37918-39963 | EN41_19310 | glycosyl transferase |
| 5118 | JMKN01000030.1 | KEY49630.1 JB | 1422 [NA] | 473 [AA] | 40455->41877 | EN41_19315 | hypothetical protein |
| 5119 | JMKN01000032.1 | KEY49375.1 JB | 828 [NA] | 275 [AA] | 33-860 | EN41_19330 | integrase |
| 5120 | JMKN01000032.1 | KEY49376.1 JB | 390 [NA] | 129 [AA] | 857-1246 | EN41_19335 | transposase |
| 5121 | JMKN01000036.1 | KEY49242.1 JB | 1410 [NA] | 469 [AA] | 431-1840 | EN41_19370 | integrase |
| 5122 | JMKN01000036.1 | KEY49243.1 JB | 1803 [NA] | 600 [AA] | 1837-3639 | EN41_19375 | hypothetical protein |
| 5123 | JMKN01000036.1 | KEY49244.1 JB | 2151 [NA] | 716 [AA] | 3636-5786 | EN41_19380 | integrase |
| 5124 | JMKN01000036.1 | KEY49245.1 JB | 213 [NA] | 70 [AA] | 6261-6473 | EN41_19395 | hypothetical protein |
| 5125 | JMKN01000036.1 | KEY49246.1 JB | 426 [NA] | 141 [AA] | 6560-6985 | EN41_19400 | HxlR family transcriptional regulator |
| 5126 | JMKN01000036.1 | KEY49247.1 JB | 945 [NA] | 314 [AA] | 7131-8075 | EN41_19405 | 2'-hydroxyisoflavone reductase |
| 5127 | JMKN01000037.1 | KEY49240.1 JB | 717 [NA] | 238 [AA] | 251-967 | EN41_19420 | hypothetical protein |
| 5128 | JMKN01000037.1 | KEY49241.1 JB | 591 [NA] | 196 [AA] | 972-1562 | EN41_19425 | hypothetical protein |
| 5129 | JMKN01000038.1 | KEY49184.1 JB | 372 [NA] | 124 [AA] | <1-372 | EN41_19430 | hypothetical protein |