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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis UMB0913 (SEQF7998.1)
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NCBI Annotation for SEQF7998.1
Genome selected: Gardnerella vaginalis UMB0913
Contigs:4 Bases:1513612 bps
CDS:25 rRNA:3
tmRNA:1 tRNA:45
Annotation Table [page:3]
Number of Records Found: 1145 [3 Pages]
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# Molecule PID NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
1001 PKHB01000001.1 PKZ18737.1 JB 207 [NA] 68 [AA] 19780-19986 CYJ60_00085 hypothetical protein
1002 PKHB01000001.1 PKZ18738.1 JB 489 [NA] 162 [AA] 70247-70735 CYJ60_00300 hypothetical protein
1003 PKHB01000001.1 PKZ18739.1 JB 321 [NA] 106 [AA] 82135-82455 CYJ60_00345 membrane protein insertion efficiency factor YidD
1004 PKHB01000001.1 PKZ18740.1 JB 2424 [NA] 807 [AA] 94607-97030 CYJ60_00405 hypothetical protein
1005 PKHB01000001.1 PKZ18741.1 JB 222 [NA] 73 [AA] 102538-102759 CYJ60_00435 hypothetical protein
1006 PKHB01000001.1 PKZ18742.1 JB 1773 [NA] 590 [AA] 112312-114084 CYJ60_00485 ammonium transporter
1007 PKHB01000001.1 PKZ18743.1 JB 654 [NA] 217 [AA] 120684-121337 CYJ60_00515 thymidine phosphorylase
1008 PKHB01000001.1 PKZ18744.1 JB 732 [NA] 243 [AA] 125735-126466 CYJ60_00530 aquaporin
1009 PKHB01000001.1 PKZ18745.1 JB 1434 [NA] 477 [AA] 173630-175063 CYJ60_00740 amino acid permease
1010 PKHB01000001.1 PKZ18746.1 JB 1065 [NA] 354 [AA] 178760-179824 CYJ60_00760 hypothetical protein
1011 PKHB01000001.1 PKZ18747.1 JB 99 [NA] 32 [AA] 201921-202019 CYJ60_00885 hypothetical protein
1012 PKHB01000001.1 PKZ18748.1 JB 792 [NA] 263 [AA] 223869-224660 CYJ60_01000 DNA-binding response regulator
1013 PKHB01000001.1 PKZ18749.1 JB 549 [NA] 182 [AA] 239830-240378 CYJ60_01060 GtrA family protein
1014 PKHB01000001.1 PKZ18750.1 JB 858 [NA] 285 [AA] 257587-258444 CYJ60_01135 aldo/keto reductase
1015 PKHB01000001.1 PKZ18751.1 JB 1026 [NA] 341 [AA] 267755-268780 CYJ60_01180 phosphate ABC transporter, permease protein PstA
1016 PKHB01000001.1 PKZ18752.1 JB 171 [NA] 56 [AA] 287880-288050 CYJ60_01280 50S ribosomal protein L33
1017 PKHB01000001.1 PKZ18753.1 JB 1248 [NA] 415 [AA] 331003-332250 CYJ60_01555 bifunctional riboflavin kinase/FMN adenylyltransferase
1018 PKHB01000001.1 PKZ18754.1 JB 1164 [NA] 387 [AA] 358314-359477 CYJ60_01660 mevalonate kinase
1019 PKHB01000001.1 PKZ18755.1 JB 1515 [NA] 504 [AA] 392453-393967 CYJ60_01810 ABC transporter ATP-binding protein
1020 PKHB01000001.1 PKZ18756.1 JB 606 [NA] 201 [AA] 411456-412061 CYJ60_01890 xanthine phosphoribosyltransferase
1021 PKHB01000001.1 PKZ18757.1 JB 1275 [NA] 424 [AA] 458730-460004 CYJ60_02120 glycosyl transferase
1022 PKHB01000001.1 PKZ18758.1 JB 774 [NA] 257 [AA] 465521-466294 CYJ60_02155 DUF4191 domain-containing protein
1023 PKHB01000001.1 PKZ18759.1 JB 264 [NA] 87 [AA] 471095-471358 CYJ60_02180 Txe/YoeB family addiction module toxin
1024 PKHB01000001.1 PKZ18760.1 JB 858 [NA] 285 [AA] 513540-514397 CYJ60_02280 phosphatase
1025 PKHB01000001.1 PKZ18761.1 JB 681 [NA] 226 [AA] 532709-533389 CYJ60_02370 ABC transporter
1026 PKHB01000001.1 PKZ18762.1 JB 678 [NA] 225 [AA] 543247-543924 CYJ60_02415 RNA polymerase subunit sigma
1027 PKHB01000001.1 PKZ18763.1 JB 798 [NA] 265 [AA] 546310-547107 CYJ60_02430 thiamine diphosphokinase
1028 PKHB01000001.1 PKZ18764.1 JB 726 [NA] 241 [AA] 549560-550285 CYJ60_02440 translation initiation factor IF-3
1029 PKHB01000001.1 PKZ18765.1 JB 960 [NA] 319 [AA] 551006-551965 CYJ60_02455 site-specific tyrosine recombinase XerD
1030 PKHB01000001.1 PKZ18766.1 JB 327 [NA] 108 [AA] 555094-555420 CYJ60_02470 alcohol dehydrogenase
1031 PKHB01000001.1 PKZ18767.1 JB 978 [NA] 325 [AA] 562473-563450 CYJ60_02510 ABC transporter permease
1032 PKHB01000001.1 PKZ18768.1 JB 687 [NA] 228 [AA] 567649-568335 CYJ60_02530 DUF3159 domain-containing protein
1033 PKHB01000001.1 PKZ18769.1 JB 123 [NA] 40 [AA] 573561-573683 CYJ60_02560 hypothetical protein
1034 PKHB01000001.1 PKZ18770.1 JB 435 [NA] 144 [AA] 581512-581946 CYJ60_02625 hypothetical protein
1035 PKHB01000001.1 PKZ18771.1 JB 324 [NA] 107 [AA] 585062-585385 CYJ60_02635 type II toxin-antitoxin system antitoxin, RelB/DinJ family
1036 PKHB01000001.1 PKZ18772.1 JB 738 [NA] 245 [AA] 591121-591858 CYJ60_02685 ABC transporter
1037 PKHB01000001.1 PKZ18773.1 JB 1332 [NA] 443 [AA] 619184-620515 CYJ60_02765 sodium:proton antiporter
1038 PKHB01000001.1 PKZ18774.1 JB 1533 [NA] 510 [AA] 633191-634723 CYJ60_02815 L-serine ammonia-lyase
1039 PKHB01000001.1 PKZ18775.1 JB 675 [NA] 224 [AA] 636191-636865 CYJ60_02830 transcriptional repressor LexA
1040 PKHB01000001.1 PKZ18776.1 JB 2277 [NA] 758 [AA] 638210-640486 CYJ60_02845 ATP-dependent DNA helicase
1041 PKHB01000001.1 PKZ18777.1 JB 1455 [NA] 484 [AA] 648473-649927 CYJ60_02870 GTPase HflX
1042 PKHB01000001.1 PKZ18778.1 JB 900 [NA] 299 [AA] 655166-656065 CYJ60_02895 LytR family transcriptional regulator
1043 PKHB01000001.1 PKZ18779.1 JB 5784 [NA] 1927 [AA] 683151-688934 CYJ60_03005 type I pullulanase
1044 PKHB01000001.1 PKZ18780.1 JB 780 [NA] 259 [AA] 697828-698607 CYJ60_03040 ANTAR domain-containing protein
1045 PKHB01000001.1 PKZ18781.1 JB 1110 [NA] 369 [AA] 775293-776402 CYJ60_03310 phenylalanine--tRNA ligase subunit alpha
1046 PKHB01000001.1 PKZ18782.1 JB 540 [NA] 179 [AA] 779287-779826 CYJ60_03320 arginine repressor
1047 PKHB01000001.1 PKZ18783.1 JB 1107 [NA] 368 [AA] 813740-814846 CYJ60_03455 polyprenyl synthetase family protein
1048 PKHB01000001.1 PKZ18784.1 JB 1431 [NA] 476 [AA] 816078-817508 CYJ60_03465 RNA polymerase sigma factor
1049 PKHB01000001.1 PKZ18785.1 JB 1176 [NA] 391 [AA] 820112-821287 CYJ60_03475 MFS transporter
1050 PKHB01000001.1 PKZ18786.1 JB 2769 [NA] 922 [AA] 891215-893983 CYJ60_03780 DNA ligase (NAD(+)) LigA
1051 PKHB01000001.1 PKZ18787.1 JB 1401 [NA] 466 [AA] 896673-898073 CYJ60_03795 histidine--tRNA ligase
1052 PKHB01000001.1 PKZ18788.1 JB 771 [NA] 256 [AA] 900150-900920 CYJ60_03805 amino acid ABC transporter ATP-binding protein
1053 PKHB01000001.1 PKZ18789.1 JB 1092 [NA] 363 [AA] 902501-903592 CYJ60_03820 amino acid ABC transporter permease
1054 PKHB01000001.1 PKZ18790.1 JB 2952 [NA] 983 [AA] 930130-933081 CYJ60_03955 excinuclease ABC subunit UvrA
1055 PKHB01000001.1 PKZ18791.1 JB 1881 [NA] 626 [AA] 976710-978590 CYJ60_04140 elongation factor 4
1056 PKHB01000001.1 PKZ18792.1 JB 714 [NA] 237 [AA] 979205-979918 CYJ60_04150 hypothetical protein
1057 PKHB01000001.1 PKZ18793.1 JB 654 [NA] 217 [AA] 1022585-1023238 CYJ60_04310 phosphoserine phosphatase SerB
1058 PKHB01000001.1 PKZ18794.1 JB 849 [NA] 282 [AA] 1037799-1038647 CYJ60_04380 RNase adapter RapZ
1059 PKHB01000001.1 PKZ18795.1 JB 816 [NA] 271 [AA] 1089239-1090054 CYJ60_04570 DUF1679 domain-containing protein
1060 PKHB01000001.1 PKZ18796.1 JB 1695 [NA] 564 [AA] 1145839-1147533 CYJ60_04805 acetolactate synthase large subunit
1061 PKHB01000001.1 PKZ18797.1 JB 2076 [NA] 691 [AA] 1147634-1149709 CYJ60_04810 DNA primase
1062 PKHB01000001.1 PKZ18798.1 JB 594 [NA] 197 [AA] 1163926-1164519 CYJ60_04870 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
1063 PKHB01000001.1 PKZ18799.1 JB 897 [NA] 298 [AA] 1183686-1184582 CYJ60_04950 hypothetical protein
1064 PKHB01000001.1 PKZ18800.1 JB 1836 [NA] 611 [AA] 1185095-1186930 CYJ60_04960 proline--tRNA ligase
1065 PKHB01000001.1 PKZ18801.1 JB 1014 [NA] 337 [AA] 1206433-1207446 CYJ60_05020 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
1066 PKHB01000001.1 PKZ18802.1 JB 183 [NA] 60 [AA] 1209387-1209569 CYJ60_05035 hypothetical protein
1067 PKHB01000001.1 PKZ18803.1 JB 1590 [NA] 529 [AA] 1223452-1225041 CYJ60_05095 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
1068 PKHB01000001.1 PKZ18804.1 JB 1647 [NA] 548 [AA] 1263444-1265090 CYJ60_05240 hypothetical protein
1069 PKHB01000001.1 PKZ18805.1 JB 1428 [NA] 475 [AA] 1278581-1280008 CYJ60_05295 phosphoglucosamine mutase
1070 PKHB01000001.1 PKZ18806.1 JB 990 [NA] 329 [AA] 1314937-1315926 CYJ60_05395 EamA family transporter
1071 PKHB01000001.1 PKZ18807.1 JB 1257 [NA] 418 [AA] 1321282-1322538 CYJ60_05420 sugar ABC transporter
1072 PKHB01000001.1 PKZ18808.1 JB 825 [NA] 274 [AA] 1322644-1323468 CYJ60_05425 ABC transporter permease
1073 PKHB01000002.1 PKZ17666.1 JB 816 [NA] 271 [AA] 227-1042 CYJ60_05720 HD domain-containing protein
1074 PKHB01000002.1 PKZ17667.1 JB 981 [NA] 326 [AA] 3864-4844 CYJ60_05730 TatD family deoxyribonuclease
1075 PKHB01000002.1 PKZ17668.1 JB 1797 [NA] 598 [AA] 4899-6695 CYJ60_05735 ABC transporter ATP-binding protein
1076 PKHB01000002.1 PKZ17669.1 JB 1815 [NA] 604 [AA] 6698-8512 CYJ60_05740 ABC transporter ATP-binding protein
1077 PKHB01000002.1 PKZ17670.1 JB 1755 [NA] 584 [AA] 8692-10446 CYJ60_05745 ABC transporter substrate-binding protein
1078 PKHB01000002.1 PKZ17671.1 JB 1890 [NA] 629 [AA] 10758-12647 CYJ60_05750 peptide ABC transporter ATP-binding protein
1079 PKHB01000002.1 PKZ17672.1 JB 948 [NA] 315 [AA] 12669-13616 CYJ60_05755 ABC transporter permease
1080 PKHB01000002.1 PKZ17673.1 JB 1440 [NA] 479 [AA] 15187-16626 CYJ60_05765 aminopeptidase
1081 PKHB01000002.1 PKZ17674.1 JB 1878 [NA] 625 [AA] 16971-18848 CYJ60_05770 methionine--tRNA ligase
1082 PKHB01000002.1 PKZ17675.1 JB 627 [NA] 208 [AA] 19147-19773 CYJ60_05775 hypothetical protein
1083 PKHB01000002.1 PKZ17676.1 JB 264 [NA] 87 [AA] 19764-20027 CYJ60_05780 hypothetical protein
1084 PKHB01000002.1 PKZ17677.1 JB 903 [NA] 300 [AA] 20059-20961 CYJ60_05785 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
1085 PKHB01000002.1 PKZ17678.1 JB 843 [NA] 280 [AA] 21091-21933 CYJ60_05790 acetylesterase
1086 PKHB01000002.1 PKZ17679.1 JB 1608 [NA] 535 [AA] 23895-25502 CYJ60_05800 dipeptidase
1087 PKHB01000002.1 PKZ17680.1 JB 552 [NA] 183 [AA] 25614-26165 CYJ60_05805 YbhB/YbcL family Raf kinase inhibitor-like protein
1088 PKHB01000002.1 PKZ17681.1 JB 1533 [NA] 510 [AA] 26389-27921 CYJ60_05810 PTS ascorbate transporter subunit IIC
1089 PKHB01000002.1 PKZ17682.1 JB 270 [NA] 89 [AA] 28038-28307 CYJ60_05815 PTS ascorbate transporter subunit IIB
1090 PKHB01000002.1 PKZ17683.1 JB 450 [NA] 149 [AA] 28371-28820 CYJ60_05820 PTS ascorbate transporter subunit IIA
1091 PKHB01000002.1 PKZ17684.1 JB 1659 [NA] 552 [AA] 28925-30583 CYJ60_05825 phosphoenolpyruvate--protein phosphotransferase
1092 PKHB01000002.1 PKZ17685.1 JB 267 [NA] 88 [AA] 30859-31125 CYJ60_05830 HPr family phosphocarrier protein
1093 PKHB01000002.1 PKZ17686.1 JB 1080 [NA] 359 [AA] 31225-32304 CYJ60_05835 LacI family transcriptional regulator
1094 PKHB01000002.1 PKZ17687.1 JB 1179 [NA] 392 [AA] 32317-33495 CYJ60_05840 DNA polymerase III subunit delta'
1095 PKHB01000002.1 PKZ17688.1 JB 2856 [NA] 951 [AA] 34301-37156 CYJ60_05850 type I DNA topoisomerase
1096 PKHB01000002.1 PKZ17689.1 JB 1326 [NA] 441 [AA] 37288-38613 CYJ60_05855 phosphoesterase
1097 PKHB01000002.1 PKZ17690.1 JB 1143 [NA] 380 [AA] 38797-39939 CYJ60_05865 inositol-3-phosphate synthase
1098 PKHB01000002.1 PKZ17691.1 JB 2325 [NA] 774 [AA] 40112-42436 CYJ60_05870 penicillin-binding protein
1099 PKHB01000002.1 PKZ17692.1 JB 744 [NA] 247 [AA] 42553-43296 CYJ60_05875 HAD family hydrolase
1100 PKHB01000002.1 PKZ17693.1 JB 597 [NA] 198 [AA] 43447-44043 CYJ60_05880 MerR family DNA-binding transcriptional regulator
1101 PKHB01000002.1 PKZ17694.1 JB 1053 [NA] 350 [AA] 44131-45183 CYJ60_05885 J domain-containing protein
1102 PKHB01000002.1 PKZ17695.1 JB 696 [NA] 231 [AA] 45310-46005 CYJ60_05890 nucleotide exchange factor GrpE
1103 PKHB01000002.1 PKZ17696.1 JB 1884 [NA] 627 [AA] 46005-47888 CYJ60_05895 molecular chaperone DnaK
1104 PKHB01000002.1 PKZ17697.1 JB 732 [NA] 243 [AA] 48156-48887 CYJ60_05900 thiamine biosynthesis protein ThiF
1105 PKHB01000002.1 PKZ17698.1 JB 834 [NA] 277 [AA] 48924-49757 CYJ60_05905 thiazole synthase
1106 PKHB01000002.1 PKZ17699.1 JB 207 [NA] 68 [AA] 49826-50032 CYJ60_05910 thiamine biosynthesis protein ThiS
1107 PKHB01000002.1 PKZ17700.1 JB 1071 [NA] 356 [AA] 50155-51225 CYJ60_05915 glycine oxidase ThiO
1108 PKHB01000002.1 PKZ17701.1 JB 201 [NA] 66 [AA] 51660-51860 CYJ60_05920 hypothetical protein
1109 PKHB01000002.1 PKZ17702.1 JB 936 [NA] 311 [AA] 55775-56710 CYJ60_05935 sugar ABC transporter permease
1110 PKHB01000002.1 PKZ17703.1 JB 1386 [NA] 461 [AA] 56758-58143 CYJ60_05940 sugar ABC transporter substrate-binding protein
1111 PKHB01000002.1 PKZ17704.1 JB 1026 [NA] 341 [AA] 58417-59442 CYJ60_05945 LacI family transcriptional regulator
1112 PKHB01000002.1 PKZ17705.1 JB 837 [NA] 278 [AA] 59591-60427 CYJ60_05950 endonuclease VII
1113 PKHB01000002.1 PKZ17706.1 JB 1701 [NA] 566 [AA] 60505-62205 CYJ60_05955 alpha-amylase
1114 PKHB01000002.1 PKZ17707.1 JB 1230 [NA] 409 [AA] 62464-63693 CYJ60_05960 ABC transporter substrate-binding protein
1115 PKHB01000002.1 PKZ17708.1 JB 1407 [NA] 468 [AA] 63853-65259 CYJ60_05965 sugar ABC transporter permease
1116 PKHB01000002.1 PKZ17709.1 JB 924 [NA] 307 [AA] 65256-66179 CYJ60_05970 sugar ABC transporter permease
1117 PKHB01000002.1 PKZ17710.1 JB 2010 [NA] 669 [AA] 66492-68501 CYJ60_05975 type I pullulanase
1118 PKHB01000002.1 PKZ17711.1 JB 2250 [NA] 749 [AA] 68779-71028 CYJ60_05980 4-alpha-glucanotransferase
1119 PKHB01000002.1 PKZ17712.1 JB 612 [NA] 203 [AA] 71212-71823 CYJ60_05985 DUF624 domain-containing protein
1120 PKHB01000002.1 PKZ17713.1 JB 834 [NA] 277 [AA] 72012-72845 CYJ60_05990 carbohydrate ABC transporter permease
1121 PKHB01000002.1 PKZ17714.1 JB 852 [NA] 283 [AA] 72842-73693 CYJ60_05995 sugar ABC transporter permease
1122 PKHB01000002.1 PKZ17715.1 JB 1014 [NA] 337 [AA] 73996-75009 CYJ60_06000 LacI family transcriptional regulator
1123 PKHB01000002.1 PKZ17716.1 JB 1344 [NA] 447 [AA] 75172-76515 CYJ60_06005 ABC transporter substrate-binding protein
1124 PKHB01000002.1 PKZ17717.1 JB 711 [NA] 236 [AA] 76876-77586 CYJ60_06010 histidine phosphatase family protein
1125 PKHB01000002.1 PKZ17718.1 JB 459 [NA] 152 [AA] 77756-78214 CYJ60_06015 DUF4235 domain-containing protein
1126 PKHB01000002.1 PKZ17719.1 JB 807 [NA] 268 [AA] 78259-79065 CYJ60_06020 NADPH-dependent oxidoreductase
1127 PKHB01000002.1 PKZ17720.1 JB 258 [NA] 85 [AA] 79101-79358 CYJ60_06025 hypothetical protein
1128 PKHB01000002.1 PKZ17721.1 JB 1545 [NA] 514 [AA] 79678-81222 CYJ60_06030 aspartate aminotransferase
1129 PKHB01000002.1 PKZ17722.1 JB 525 [NA] 174 [AA] 82664-83188 CYJ60_06040 hypothetical protein
1130 PKHB01000002.1 PKZ17723.1 JB 1212 [NA] 403 [AA] 83216-84427 CYJ60_06045 ABC transporter permease
1131 PKHB01000002.1 PKZ17724.1 JB 711 [NA] 236 [AA] 84411-85121 CYJ60_06050 ABC transporter ATP-binding protein
1132 PKHB01000002.1 PKZ17725.1 JB 903 [NA] 300 [AA] 85118-86020 CYJ60_06055 hypothetical protein
1133 PKHB01000002.1 PKZ17726.1 JB 672 [NA] 223 [AA] 86496-87167 CYJ60_06060 DNA-binding response regulator
1134 PKHB01000002.1 PKZ17727.1 JB 1161 [NA] 386 [AA] 87164-88324 CYJ60_06065 histidine kinase
1135 PKHB01000002.1 PKZ17728.1 JB 372 [NA] 123 [AA] 88486-88857 CYJ60_06070 hypothetical protein
1136 PKHB01000002.1 PKZ17729.1 JB 720 [NA] 239 [AA] 89410-90129 CYJ60_06080 nitroreductase
1137 PKHB01000002.1 PKZ17730.1 JB 2634 [NA] 877 [AA] 1066-3699 CYJ60_05725 potassium transporter Kup
1138 PKHB01000002.1 PKZ17731.1 JB 921 [NA] 306 [AA] 13641-14561 CYJ60_05760 ABC transporter permease
1139 PKHB01000002.1 PKZ17732.1 JB 1533 [NA] 510 [AA] 22149-23681 CYJ60_05795 formate--tetrahydrofolate ligase
1140 PKHB01000002.1 PKZ17733.1 JB 609 [NA] 202 [AA] 33550-34158 CYJ60_05845 dTMP kinase
1141 PKHB01000002.1 PKZ17734.1 JB 2667 [NA] 888 [AA] 51993-54659 CYJ60_05925 alpha-glucosidase
1142 PKHB01000002.1 PKZ17735.1 JB 852 [NA] 283 [AA] 54867-55718 CYJ60_05930 carbohydrate ABC transporter permease
1143 PKHB01000002.1 PKZ17736.1 JB 255 [NA] 84 [AA] 89038-89292 CYJ60_06075 transcriptional regulator
1144 PKHB01000003.1 PKZ17665.1 JB 186 [NA] 61 [AA] <1-187 CYJ60_06085 hypothetical protein
1145 PKHB01000004.1 PKZ17664.1 JB 439 [NA] 146 [AA] <1->439 CYJ60_06105 DNA-binding protein