Genome Explorer: Lacticaseibacillus paracasei W56 (SEQF7141.1)
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NCBI Annotation for SEQF7141.1
| Genome selected: Lacticaseibacillus paracasei W56 | |||
| Contigs: | 2 | Bases: | 3132096 bps |
| CDS: | 3126 | rRNA: | 15 |
| tmRNA: | 0 | tRNA: | 60 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 3001 | HE970764.1 | CCK23948.1 JB | 648 [NA] | 215 [AA] | 3012979-3013626 | BN194_30010 | Putative acetyltransferase YJL218W |
| 3002 | HE970764.1 | CCK23949.1 JB | 795 [NA] | 264 [AA] | 3013649-3014443 | BN194_30020 | Phosphatase YbjI |
| 3003 | HE970764.1 | CCK23950.1 JB | 1422 [NA] | 473 [AA] | 3014583-3016004 | BN194_30030 | Aspartate ammonia-lyase |
| 3004 | HE970764.1 | CCK23951.1 JB | 609 [NA] | 202 [AA] | 3016132-3016740 | BN194_30040 | Putative uncharacterized protein |
| 3005 | HE970764.1 | CCK23952.1 JB | 474 [NA] | 157 [AA] | 3016828-3017301 | BN194_30050 | Putative uncharacterized protein |
| 3006 | HE970764.1 | CCK23953.1 JB | 1182 [NA] | 393 [AA] | 3017906-3019087 | BN194_30060 | NAD-dependent malic enzyme |
| 3007 | HE970764.1 | CCK23954.1 JB | 1326 [NA] | 441 [AA] | 3019277-3020602 | BN194_30070 | Na(+)-malate symporter |
| 3008 | HE970764.1 | CCK23955.1 JB | 1545 [NA] | 514 [AA] | 3020755-3022299 | BN194_30080 | Sensor histidine kinase malK |
| 3009 | HE970764.1 | CCK23956.1 JB | 690 [NA] | 229 [AA] | 3022277-3022966 | BN194_30090 | Transcriptional regulatory protein malR |
| 3010 | HE970764.1 | CCK23957.1 JB | 960 [NA] | 319 [AA] | 3023221-3024180 | BN194_30100 | Putative oxidoreductase GLYR1 |
| 3011 | HE970764.1 | CCK23958.1 JB | 519 [NA] | 172 [AA] | 3024336-3024854 | BN194_30110 | Uncharacterized protein IRC4 |
| 3012 | HE970764.1 | CCK23959.1 JB | 399 [NA] | 132 [AA] | 3024965-3025363 | BN194_30120 | Putative uncharacterized protein |
| 3013 | HE970764.1 | CCK23960.1 JB | 1299 [NA] | 432 [AA] | 3025554-3026852 | BN194_30130 | Putative uncharacterized protein |
| 3014 | HE970764.1 | CCK23961.1 JB | 939 [NA] | 312 [AA] | 3026933-3027871 | BN194_30140 | Putative uncharacterized protein |
| 3015 | HE970764.1 | CCK23962.1 JB | 912 [NA] | 303 [AA] | 3028205-3029116 | BN194_30150 | Site-specific recombinase |
| 3016 | HE970764.1 | CCK23963.1 JB | 258 [NA] | 85 [AA] | 3029104-3029361 | BN194_30160 | Site-specific recombinase |
| 3017 | HE970764.1 | CCK23964.1 JB | 639 [NA] | 212 [AA] | 3029474-3030112 | BN194_30170 | Transcriptional regulator, XRE family |
| 3018 | HE970764.1 | CCK23965.1 JB | 276 [NA] | 91 [AA] | 3030280-3030555 | BN194_30180 | Putative uncharacterized protein |
| 3019 | HE970764.1 | CCK23966.1 JB | 222 [NA] | 73 [AA] | 3030623-3030844 | BN194_30190 | Putative uncharacterized protein |
| 3020 | HE970764.1 | CCK23967.1 JB | 138 [NA] | 45 [AA] | 3030837-3030974 | BN194_30200 | Conserved protein |
| 3021 | HE970764.1 | CCK23968.1 JB | 192 [NA] | 63 [AA] | 3030955-3031146 | BN194_30210 | Putative uncharacterized protein |
| 3022 | HE970764.1 | CCK23969.1 JB | 291 [NA] | 96 [AA] | 3031193-3031483 | BN194_30220 | Putative uncharacterized protein |
| 3023 | HE970764.1 | CCK23970.1 JB | 186 [NA] | 61 [AA] | 3031483-3031668 | BN194_30230 | Putative uncharacterized protein |
| 3024 | HE970764.1 | CCK23971.1 JB | 813 [NA] | 270 [AA] | 3031652-3032464 | BN194_30240 | Bifunctional DNA primase/polymerase |
| 3025 | HE970764.1 | CCK23972.1 JB | 1587 [NA] | 528 [AA] | 3032477-3034063 | BN194_30250 | Phage/plasmid primase, P4 family |
| 3026 | HE970764.1 | CCK23973.1 JB | 336 [NA] | 111 [AA] | 3034389-3034724 | BN194_30260 | Putative uncharacterized protein |
| 3027 | HE970764.1 | CCK23974.1 JB | 186 [NA] | 61 [AA] | 3034729-3034914 | BN194_30270 | Putative uncharacterized protein |
| 3028 | HE970764.1 | CCK23975.1 JB | 423 [NA] | 140 [AA] | 3034911-3035333 | BN194_30280 | HNH endonuclease |
| 3029 | HE970764.1 | CCK23976.1 JB | 471 [NA] | 156 [AA] | 3035450-3035920 | BN194_30290 | Putative terminase small subunit |
| 3030 | HE970764.1 | CCK23977.1 JB | 1704 [NA] | 567 [AA] | 3035917-3037620 | BN194_30300 | Phage terminase-like protein |
| 3031 | HE970764.1 | CCK23978.1 JB | 180 [NA] | 59 [AA] | 3037586-3037765 | BN194_30310 | Predicted protein |
| 3032 | HE970764.1 | CCK23979.1 JB | 1182 [NA] | 393 [AA] | 3037770-3038951 | BN194_30320 | Phage portal protein, HK97 family |
| 3033 | HE970764.1 | CCK23980.1 JB | 1557 [NA] | 518 [AA] | 3038938-3040494 | BN194_30330 | Phage capsid protein |
| 3034 | HE970764.1 | CCK23981.1 JB | 294 [NA] | 97 [AA] | 3040549-3040842 | BN194_30340 | Uncharacterized phage protein (Possible DNA packaging) |
| 3035 | HE970764.1 | CCK23982.1 JB | 141 [NA] | 46 [AA] | 3041300-3041440 | BN194_30350 | Putative uncharacterized protein |
| 3036 | HE970764.1 | CCK23983.1 JB | 255 [NA] | 84 [AA] | 3041456-3041710 | BN194_30360 | Putative uncharacterized protein |
| 3037 | HE970764.1 | CCK23984.1 JB | 942 [NA] | 313 [AA] | 3042396-3043337 | BN194_30370 | Ribose-phosphate pyrophosphokinase 1 |
| 3038 | HE970764.1 | CCK23985.1 JB | 930 [NA] | 309 [AA] | 3043516-3044445 | BN194_30380 | Uncharacterized protein yqkD |
| 3039 | HE970764.1 | CCK23986.1 JB | 1005 [NA] | 334 [AA] | 3044543-3045547 | BN194_30390 | Esterase/lipase |
| 3040 | HE970764.1 | CCK23987.1 JB | 1158 [NA] | 385 [AA] | 3045617-3046774 | BN194_30400 | Mannitol-1-phosphate 5-dehydrogenase |
| 3041 | HE970764.1 | CCK23988.1 JB | 477 [NA] | 158 [AA] | 3046775-3047251 | BN194_30410 | Mannitol-specific phosphotransferase enzyme IIA component |
| 3042 | HE970764.1 | CCK23989.1 JB | 2085 [NA] | 694 [AA] | 3047223-3049307 | BN194_30420 | Transcriptional regulator |
| 3043 | HE970764.1 | CCK23990.1 JB | 1851 [NA] | 616 [AA] | 3049317-3051167 | BN194_30430 | PTS system mannitol-specific EIICB component |
| 3044 | HE970764.1 | CCK23991.1 JB | 711 [NA] | 236 [AA] | 3051545-3052255 | BN194_30440 | Glucosamine-6-phosphate deaminase |
| 3045 | HE970764.1 | CCK23992.1 JB | 726 [NA] | 241 [AA] | 3052611-3053336 | BN194_30450 | Predicted hydrolase of the HAD superfamily |
| 3046 | HE970764.1 | CCK23993.1 JB | 261 [NA] | 86 [AA] | 3053679-3053939 | BN194_30460 | Putative uncharacterized protein |
| 3047 | HE970764.1 | CCK23994.1 JB | 177 [NA] | 58 [AA] | 3053950-3054126 | BN194_30470 | hypothetical protein |
| 3048 | HE970764.1 | CCK23995.1 JB | 1065 [NA] | 354 [AA] | 3054697-3055761 | BN194_30480 | Putative uncharacterized protein |
| 3049 | HE970764.1 | CCK23996.1 JB | 690 [NA] | 229 [AA] | 3055754-3056443 | BN194_30490 | Uncharacterized ABC transporter ATP-binding protein YvrO |
| 3050 | HE970764.1 | CCK23997.1 JB | 1191 [NA] | 396 [AA] | 3056430-3057620 | BN194_30500 | Macrolide export ATP-binding/permease protein macB |
| 3051 | HE970764.1 | CCK23998.1 JB | 2019 [NA] | 672 [AA] | 3057777-3059795 | BN194_30510 | LPXTG-motif cell wall anchor domain protein |
| 3052 | HE970764.1 | CCK23999.1 JB | 3921 [NA] | 1306 [AA] | 3059820-3063740 | BN194_30520 | Putative uncharacterized protein |
| 3053 | HE970764.1 | CCK24000.1 JB | 249 [NA] | 82 [AA] | 3063943-3064191 | BN194_30530 | hypothetical protein |
| 3054 | HE970764.1 | CCK24001.1 JB | 1086 [NA] | 361 [AA] | 3064377-3065462 | BN194_30540 | Uncharacterized oxidoreductase YbdH |
| 3055 | HE970764.1 | CCK24002.1 JB | 1221 [NA] | 406 [AA] | 3065606-3066826 | BN194_30550 | Putative amidohydrolase yhaA |
| 3056 | HE970764.1 | CCK24003.1 JB | 513 [NA] | 170 [AA] | 3066802-3067314 | BN194_30560 | Membrane protein |
| 3057 | HE970764.1 | CCK24004.1 JB | 765 [NA] | 254 [AA] | 3067292-3068056 | BN194_30570 | Putative uncharacterized protein |
| 3058 | HE970764.1 | CCK24005.1 JB | 123 [NA] | 40 [AA] | 3068218-3068340 | BN194_30580 | hypothetical protein |
| 3059 | HE970764.1 | CCK24006.1 JB | 1920 [NA] | 639 [AA] | 3068689-3070608 | BN194_30590 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG |
| 3060 | HE970764.1 | CCK24007.1 JB | 1614 [NA] | 537 [AA] | 3070632-3072245 | BN194_30600 | tRNA modification GTPase MnmE |
| 3061 | HE970764.1 | CCK24008.1 JB | 927 [NA] | 308 [AA] | 3073153-3074079 | BN194_30610 | Membrane protein insertase YidC |
| 3062 | HE970764.1 | CCK24009.1 JB | 558 [NA] | 185 [AA] | 3074224-3074781 | BN194_30620 | Ribonuclease P protein component |
| 3063 | HE970764.1 | CCK24010.1 JB | 150 [NA] | 49 [AA] | 3074909-3075058 | BN194_30630 | 50S ribosomal protein L34 |
| 3064 | HE970765.1 | CCK24011.1 JB | 120 [NA] | 39 [AA] | 294-413 | BN194_P0010 | Putative holin-like toxin |
| 3065 | HE970765.1 | CCK24012.1 JB | 1392 [NA] | 463 [AA] | 781-2172 | BN194_P0020 | Uncharacterized protein pXO2-78/BXB0107/GBAA_pXO2_0107 |
| 3066 | HE970765.1 | CCK24013.1 JB | 2208 [NA] | 735 [AA] | 2217-4424 | BN194_P0030 | Chromosome segregation ATPase |
| 3067 | HE970765.1 | CCK24014.1 JB | 402 [NA] | 133 [AA] | 4396-4797 | BN194_P0040 | Predicted protein |
| 3068 | HE970765.1 | CCK24015.1 JB | 249 [NA] | 82 [AA] | 4794-5042 | BN194_P0050 | hypothetical protein |
| 3069 | HE970765.1 | CCK24016.1 JB | 276 [NA] | 91 [AA] | 5039-5314 | BN194_P0060 | Putative uncharacterized protein |
| 3070 | HE970765.1 | CCK24017.1 JB | 975 [NA] | 324 [AA] | 5402-6376 | BN194_P0070 | Putative DNA primase |
| 3071 | HE970765.1 | CCK24018.1 JB | 1146 [NA] | 381 [AA] | 6394-7539 | BN194_P0080 | Putative uncharacterized protein |
| 3072 | HE970765.1 | CCK24019.1 JB | 231 [NA] | 76 [AA] | 7575-7805 | BN194_P0090 | Putative uncharacterized protein |
| 3073 | HE970765.1 | CCK24020.1 JB | 525 [NA] | 174 [AA] | 7823-8347 | BN194_P0100 | Putative uncharacterized protein |
| 3074 | HE970765.1 | CCK24021.1 JB | 2478 [NA] | 825 [AA] | 8361-10838 | BN194_P0110 | TrsG |
| 3075 | HE970765.1 | CCK24022.1 JB | 2457 [NA] | 818 [AA] | 10828-13284 | BN194_P0120 | Putative uncharacterized protein |
| 3076 | HE970765.1 | CCK24023.1 JB | 834 [NA] | 277 [AA] | 13621-14454 | BN194_P0130 | Putative uncharacterized protein |
| 3077 | HE970765.1 | CCK24024.1 JB | 207 [NA] | 68 [AA] | 14474-14680 | BN194_P0140 | Putative uncharacterized protein |
| 3078 | HE970765.1 | CCK24025.1 JB | 1896 [NA] | 631 [AA] | 14698-16593 | BN194_P0150 | Type IV secretion system protein VirD4 |
| 3079 | HE970765.1 | CCK24026.1 JB | 477 [NA] | 158 [AA] | 16593-17069 | BN194_P0160 | Putative uncharacterized protein |
| 3080 | HE970765.1 | CCK24027.1 JB | 1524 [NA] | 507 [AA] | 17088-18611 | BN194_P0170 | Pesticidal crystal protein cry22Aa |
| 3081 | HE970765.1 | CCK24028.1 JB | 267 [NA] | 88 [AA] | 18635-18901 | BN194_P0180 | Putative uncharacterized protein |
| 3082 | HE970765.1 | CCK24029.1 JB | 279 [NA] | 92 [AA] | 18913-19191 | BN194_P0190 | Putative uncharacterized protein |
| 3083 | HE970765.1 | CCK24030.1 JB | 159 [NA] | 52 [AA] | 19400-19558 | BN194_P0200 | Putative uncharacterized protein |
| 3084 | HE970765.1 | CCK24031.1 JB | 189 [NA] | 62 [AA] | 19571-19759 | BN194_P0210 | Putative uncharacterized protein |
| 3085 | HE970765.1 | CCK24032.1 JB | 684 [NA] | 227 [AA] | 19848-20531 | BN194_P0220 | Transposase for insertion sequence-like element IS431mec |
| 3086 | HE970765.1 | CCK24033.1 JB | 741 [NA] | 246 [AA] | 20606-21346 | BN194_P0230 | Uncharacterized protein MJ0165 |
| 3087 | HE970765.1 | CCK24034.1 JB | 792 [NA] | 263 [AA] | 21377-22168 | BN194_P0240 | UPF0272 protein Cthe_0369 |
| 3088 | HE970765.1 | CCK24035.1 JB | 432 [NA] | 143 [AA] | 22207-22638 | BN194_P0250 | Lactate racemization operon protein LarC,C-terminal domain |
| 3089 | HE970765.1 | CCK24036.1 JB | 690 [NA] | 229 [AA] | 22670-23359 | BN194_P0260 | Probable glycerol uptake facilitator protein |
| 3090 | HE970765.1 | CCK24037.1 JB | 831 [NA] | 276 [AA] | 23384-24214 | BN194_P0270 | Uncharacterized protein slr1717 |
| 3091 | HE970765.1 | CCK24038.1 JB | 717 [NA] | 238 [AA] | 24551-25267 | BN194_P0280 | Transposase for insertion sequence-like element IS431mec |
| 3092 | HE970765.1 | CCK24039.1 JB | 894 [NA] | 297 [AA] | 25324-26217 | BN194_P0290 | Deoxyribonuclease |
| 3093 | HE970765.1 | CCK24040.1 JB | 318 [NA] | 105 [AA] | 26223-26540 | BN194_P0300 | Putative uncharacterized protein |
| 3094 | HE970765.1 | CCK24041.1 JB | 543 [NA] | 180 [AA] | 26589-27131 | BN194_P0310 | Transposase |
| 3095 | HE970765.1 | CCK24042.1 JB | 627 [NA] | 208 [AA] | 27444-28070 | BN194_P0320 | Type I site-specific deoxyribonuclease specificity subunit |
| 3096 | HE970765.1 | CCK24043.1 JB | 1617 [NA] | 538 [AA] | 28067-29683 | BN194_P0330 | Type I restriction enzyme EcoprrI M protein |
| 3097 | HE970765.1 | CCK24044.1 JB | 2706 [NA] | 901 [AA] | 29697-32402 | BN194_P0340 | Type-1 restriction enzyme R protein |
| 3098 | HE970765.1 | CCK24045.1 JB | 207 [NA] | 68 [AA] | 32928-33134 | BN194_P0350 | Putative uncharacterized protein |
| 3099 | HE970765.1 | CCK24046.1 JB | 912 [NA] | 303 [AA] | 33606-34517 | BN194_P0360 | Cysteine synthase |
| 3100 | HE970765.1 | CCK24047.1 JB | 1185 [NA] | 394 [AA] | 34539-35723 | BN194_P0370 | Cystathionine gamma-synthase |
| 3101 | HE970765.1 | CCK24048.1 JB | 558 [NA] | 185 [AA] | 35689-36246 | BN194_P0380 | Serine acetyltransferase |
| 3102 | HE970765.1 | CCK24049.1 JB | 123 [NA] | 40 [AA] | 36251-36373 | BN194_P0390 | hypothetical protein |
| 3103 | HE970765.1 | CCK24050.1 JB | 288 [NA] | 95 [AA] | 36435-36722 | BN194_P0400 | Cytosolic protein |
| 3104 | HE970765.1 | CCK24051.1 JB | 651 [NA] | 216 [AA] | 36725-37375 | BN194_P0410 | Putative transposon Tn552 DNA-invertase bin3 |
| 3105 | HE970765.1 | CCK24052.1 JB | 468 [NA] | 155 [AA] | 37649-38116 | BN194_P0420 | Putative uncharacterized protein |
| 3106 | HE970765.1 | CCK24053.1 JB | 717 [NA] | 238 [AA] | 38839-39555 | BN194_P0430 | Transposase insF for insertion sequence IS3 |
| 3107 | HE970765.1 | CCK24054.1 JB | 285 [NA] | 94 [AA] | 39696-39980 | BN194_P0440 | IS3/IS911 family transposase |
| 3108 | HE970765.1 | CCK24055.1 JB | 4764 [NA] | 1587 [AA] | 40272-45035 | BN194_P0450 | Putative uncharacterized protein ybeF |
| 3109 | HE970765.1 | CCK24056.1 JB | 159 [NA] | 52 [AA] | 45152-45310 | BN194_P0460 | hypothetical protein |
| 3110 | HE970765.1 | CCK24057.1 JB | 282 [NA] | 93 [AA] | 45513-45794 | BN194_P0470 | Insertion element IS600 uncharacterized 11 kDa protein |
| 3111 | HE970765.1 | CCK24058.1 JB | 816 [NA] | 271 [AA] | 45860-46675 | BN194_P0480 | Transposase for insertion sequence element IS904 |
| 3112 | HE970765.1 | CCK24059.1 JB | 318 [NA] | 105 [AA] | 46911-47228 | BN194_P0490 | Putative uncharacterized protein |
| 3113 | HE970765.1 | CCK24060.1 JB | 384 [NA] | 127 [AA] | 47422-47805 | BN194_P0500 | Putative uncharacterized protein |
| 3114 | HE970765.1 | CCK24061.1 JB | 1293 [NA] | 430 [AA] | 47802-49094 | BN194_P0510 | Putative UV-damage repair protein uvrX |
| 3115 | HE970765.1 | CCK24062.1 JB | 342 [NA] | 113 [AA] | 49087-49428 | BN194_P0520 | Predicted ORF |
| 3116 | HE970765.1 | CCK24063.1 JB | 390 [NA] | 129 [AA] | 49473-49862 | BN194_P0530 | Putative uncharacterized protein |
| 3117 | HE970765.1 | CCK24064.1 JB | 843 [NA] | 280 [AA] | 49855-50697 | BN194_P0540 | RepB-2 |
| 3118 | HE970765.1 | CCK24065.1 JB | 1056 [NA] | 351 [AA] | 51082-52137 | BN194_P0550 | 41 kDa protein |
| 3119 | HE970765.1 | CCK24066.1 JB | 738 [NA] | 245 [AA] | 52127-52864 | BN194_P0560 | Predicted ORF |
| 3120 | HE970765.1 | CCK24067.1 JB | 228 [NA] | 75 [AA] | 53358-53585 | BN194_P0570 | Putative uncharacterized protein |
| 3121 | HE970765.1 | CCK24068.1 JB | 237 [NA] | 78 [AA] | 54112-54348 | BN194_P0580 | Putative uncharacterized protein |
| 3122 | HE970765.1 | CCK24069.1 JB | 219 [NA] | 72 [AA] | 54356-54574 | BN194_P0590 | Putative uncharacterized protein |
| 3123 | HE970765.1 | CCK24070.1 JB | 231 [NA] | 76 [AA] | 54567-54797 | BN194_P0600 | Putative uncharacterized protein |
| 3124 | HE970765.1 | CCK24071.1 JB | 276 [NA] | 91 [AA] | 54784-55059 | BN194_P0610 | Putative uncharacterized protein |
| 3125 | HE970765.1 | CCK24072.1 JB | 249 [NA] | 82 [AA] | 55278-55526 | BN194_P0620 | Putative uncharacterized protein |
| 3126 | HE970765.1 | CCK24073.1 JB | 717 [NA] | 238 [AA] | 55567-56283 | BN194_P0630 | Transposase for insertion sequence-like element IS431mec |