Genome Explorer: Rothia dentocariosa HMSC065D02 (SEQF6854.1)
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PROKKA Annotation for SEQF6854.1
| Genome selected: Rothia dentocariosa HMSC065D02 | |||
| Contigs: | 35 | Bases: | 2478701 bps |
| CDS: | 2119 | rRNA: | 5 |
| tmRNA: | 1 | tRNA: | 50 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | SEQF6854.1_KV820092.1 | SEQF6854.1_02059 JB | 258 [NA] | 85 [AA] | 600278-600535 | secG | putative protein-export membrane protein SecG |
| 2002 | SEQF6854.1_KV820092.1 | SEQF6854.1_02060 JB | 411 [NA] | 136 [AA] | 600658-601068 | hypothetical protein | |
| 2003 | SEQF6854.1_KV820092.1 | SEQF6854.1_02061 JB | 1626 [NA] | 541 [AA] | 601213-602838 | betL | Glycine betaine transporter BetL |
| 2004 | SEQF6854.1_KV820092.1 | SEQF6854.1_02062 JB | 348 [NA] | 115 [AA] | 603128-603475 | hypothetical protein | |
| 2005 | SEQF6854.1_KV820092.1 | SEQF6854.1_02063 JB | 777 [NA] | 258 [AA] | 603604-604380 | tpiA | Triosephosphate isomerase |
| 2006 | SEQF6854.1_KV820092.1 | SEQF6854.1_02064 JB | 1458 [NA] | 485 [AA] | 604522-605979 | hypothetical protein | |
| 2007 | SEQF6854.1_KV820092.1 | SEQF6854.1_02065 JB | 1224 [NA] | 407 [AA] | 606097-607320 | pgk | Phosphoglycerate kinase |
| 2008 | SEQF6854.1_KV820092.1 | SEQF6854.1_02066 JB | 1005 [NA] | 334 [AA] | 607591-608595 | gapA | Glyceraldehyde-3-phosphate dehydrogenase |
| 2009 | SEQF6854.1_KV820092.1 | SEQF6854.1_02067 JB | 177 [NA] | 58 [AA] | 608648-608824 | hypothetical protein | |
| 2010 | SEQF6854.1_KV820092.1 | SEQF6854.1_02068 JB | 966 [NA] | 321 [AA] | 609065-610030 | whiA | putative cell division protein WhiA |
| 2011 | SEQF6854.1_KV820092.1 | SEQF6854.1_02069 JB | 1071 [NA] | 356 [AA] | 610167-611237 | Putative gluconeogenesis factor | |
| 2012 | SEQF6854.1_KV820092.1 | SEQF6854.1_02070 JB | 891 [NA] | 296 [AA] | 611237-612127 | Nucleotide-binding protein | |
| 2013 | SEQF6854.1_KV820092.1 | SEQF6854.1_02071 JB | 1974 [NA] | 657 [AA] | 612231-614204 | uvrC | UvrABC system protein C |
| 2014 | SEQF6854.1_KV820092.1 | SEQF6854.1_02072 JB | 681 [NA] | 226 [AA] | 614296-614976 | aas | Bifunctional protein Aas |
| 2015 | SEQF6854.1_KV820092.1 | SEQF6854.1_02073 JB | 2412 [NA] | 803 [AA] | 615437-617848 | hypothetical protein | |
| 2016 | SEQF6854.1_KV820092.1 | SEQF6854.1_02074 JB | 810 [NA] | 269 [AA] | 617854-618663 | hypothetical protein | |
| 2017 | SEQF6854.1_KV820092.1 | SEQF6854.1_02075 JB | 783 [NA] | 260 [AA] | 618822-619604 | qmcA | Protein QmcA |
| 2018 | SEQF6854.1_KV820092.1 | SEQF6854.1_02076 JB | 549 [NA] | 182 [AA] | 619814-620362 | ywrO | General stress protein 14 |
| 2019 | SEQF6854.1_KV820092.1 | SEQF6854.1_02077 JB | 549 [NA] | 182 [AA] | 620616-621164 | kefF | Glutathione-regulated potassium-efflux system ancillary protein KefF |
| 2020 | SEQF6854.1_KV820092.1 | SEQF6854.1_02078 JB | 1644 [NA] | 547 [AA] | 621276-622919 | pdxK | Pyridoxinepyridoxalpyridoxamine kinase |
| 2021 | SEQF6854.1_KV820092.1 | SEQF6854.1_02080 JB | 756 [NA] | 251 [AA] | 623343-624098 | hypothetical protein | |
| 2022 | SEQF6854.1_KV820092.1 | SEQF6854.1_02081 JB | 1089 [NA] | 362 [AA] | 624142-625230 | hypothetical protein | |
| 2023 | SEQF6854.1_KV820092.1 | SEQF6854.1_02082 JB | 1734 [NA] | 577 [AA] | 625343-627076 | Putative multidrug export ATP-bindingpermease protein | |
| 2024 | SEQF6854.1_KV820092.1 | SEQF6854.1_02083 JB | 1827 [NA] | 608 [AA] | 627069-628895 | hypothetical protein | |
| 2025 | SEQF6854.1_KV820092.1 | SEQF6854.1_02084 JB | 726 [NA] | 241 [AA] | 629132-629857 | hypothetical protein | |
| 2026 | SEQF6854.1_KV820092.1 | SEQF6854.1_02085 JB | 2607 [NA] | 868 [AA] | 630082-632688 | hypothetical protein | |
| 2027 | SEQF6854.1_KV820092.1 | SEQF6854.1_02086 JB | 1365 [NA] | 454 [AA] | 633378-634742 | hypothetical protein | |
| 2028 | SEQF6854.1_KV820092.1 | SEQF6854.1_02087 JB | 1341 [NA] | 446 [AA] | 635437-636777 | hypothetical protein | |
| 2029 | SEQF6854.1_KV820092.1 | SEQF6854.1_02088 JB | 1317 [NA] | 438 [AA] | 636932-638248 | hypothetical protein | |
| 2030 | SEQF6854.1_KV820092.1 | SEQF6854.1_02089 JB | 1452 [NA] | 483 [AA] | 638363-639814 | pip | Proline iminopeptidase |
| 2031 | SEQF6854.1_KV820092.1 | SEQF6854.1_02090 JB | 603 [NA] | 200 [AA] | 639891-640493 | hypothetical protein | |
| 2032 | SEQF6854.1_KV820092.1 | SEQF6854.1_02091 JB | 399 [NA] | 132 [AA] | 640649-641047 | hxlR_2 | HTH-type transcriptional activator HxlR |
| 2033 | SEQF6854.1_KV820092.1 | SEQF6854.1_02092 JB | 696 [NA] | 231 [AA] | 641069-641764 | hypothetical protein | |
| 2034 | SEQF6854.1_KV820092.1 | SEQF6854.1_02093 JB | 684 [NA] | 227 [AA] | 641919-642602 | hypothetical protein | |
| 2035 | SEQF6854.1_KV820092.1 | SEQF6854.1_02094 JB | 2169 [NA] | 722 [AA] | 642812-644980 | uvrB | UvrABC system protein B |
| 2036 | SEQF6854.1_KV820092.1 | SEQF6854.1_02095 JB | 1200 [NA] | 399 [AA] | 645095-646294 | hypothetical protein | |
| 2037 | SEQF6854.1_KV820092.1 | SEQF6854.1_02096 JB | 693 [NA] | 230 [AA] | 646434-647126 | hypothetical protein | |
| 2038 | SEQF6854.1_KV820092.1 | SEQF6854.1_02097 JB | 621 [NA] | 206 [AA] | 647160-647780 | coaE | Dephospho-CoA kinase |
| 2039 | SEQF6854.1_KV820092.1 | SEQF6854.1_02098 JB | 1461 [NA] | 486 [AA] | 647896-649356 | rpsA | 30S ribosomal protein S1 |
| 2040 | SEQF6854.1_KV820092.1 | SEQF6854.1_02099 JB | 2946 [NA] | 981 [AA] | 649678-652623 | polA | DNA polymerase I |
| 2041 | SEQF6854.1_KV820092.1 | SEQF6854.1_02100 JB | 1278 [NA] | 425 [AA] | 652853-654130 | sstT | Serinethreonine transporter SstT |
| 2042 | SEQF6854.1_KV820092.1 | SEQF6854.1_02101 JB | 414 [NA] | 137 [AA] | 654210-654623 | hypothetical protein | |
| 2043 | SEQF6854.1_KV820092.1 | SEQF6854.1_02102 JB | 465 [NA] | 154 [AA] | 654736-655200 | menI | 1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase |
| 2044 | SEQF6854.1_KV820092.1 | SEQF6854.1_02103 JB | 252 [NA] | 83 [AA] | 655223-655474 | hypothetical protein | |
| 2045 | SEQF6854.1_KV820092.1 | SEQF6854.1_02104 JB | 615 [NA] | 204 [AA] | 655641-656255 | pdtaR | putative transcriptional regulatory protein pdtaR |
| 2046 | SEQF6854.1_KV820092.1 | SEQF6854.1_02106 JB | 1479 [NA] | 492 [AA] | 656746-658224 | pyk | Pyruvate kinase |
| 2047 | SEQF6854.1_KV820092.1 | SEQF6854.1_02107 JB | 573 [NA] | 190 [AA] | 658734-659306 | hypothetical protein | |
| 2048 | SEQF6854.1_KV820092.1 | SEQF6854.1_02108 JB | 1128 [NA] | 375 [AA] | 659535-660662 | lgt | Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase |
| 2049 | SEQF6854.1_KV820092.1 | SEQF6854.1_02109 JB | 852 [NA] | 283 [AA] | 660664-661515 | trpA | Tryptophan synthase alpha chain |
| 2050 | SEQF6854.1_KV820092.1 | SEQF6854.1_02110 JB | 1332 [NA] | 443 [AA] | 661512-662843 | trpB | Tryptophan synthase beta chain |
| 2051 | SEQF6854.1_KV820092.1 | SEQF6854.1_02111 JB | 795 [NA] | 264 [AA] | 663031-663825 | trpC | Indole-3-glycerol phosphate synthase |
| 2052 | SEQF6854.1_KV820092.1 | SEQF6854.1_02112 JB | 255 [NA] | 84 [AA] | 663920-664174 | hypothetical protein | |
| 2053 | SEQF6854.1_KV820092.1 | SEQF6854.1_02113 JB | 684 [NA] | 227 [AA] | 664348-665031 | hypothetical protein | |
| 2054 | SEQF6854.1_KV820092.1 | SEQF6854.1_02114 JB | 1593 [NA] | 530 [AA] | 665056-666648 | trpE | Anthranilate synthase component 1 |
| 2055 | SEQF6854.1_KV820092.1 | SEQF6854.1_02115 JB | 474 [NA] | 157 [AA] | 666788-667261 | ribH | 6%2C7-dimethyl-8-ribityllumazine synthase |
| 2056 | SEQF6854.1_KV820092.1 | SEQF6854.1_02116 JB | 762 [NA] | 253 [AA] | 667344-668105 | ribBA_1 | Riboflavin biosynthesis protein RibBA |
| 2057 | SEQF6854.1_KV820092.1 | SEQF6854.1_02117 JB | 1278 [NA] | 425 [AA] | 668102-669379 | ribBA_2 | Riboflavin biosynthesis protein RibBA |
| 2058 | SEQF6854.1_KV820092.1 | SEQF6854.1_02118 JB | 1248 [NA] | 415 [AA] | 669571-670818 | tadA_2 | tRNA-specific adenosine deaminase |
| 2059 | SEQF6854.1_KV820092.1 | SEQF6854.1_02119 JB | 720 [NA] | 239 [AA] | 670815-671534 | ribM | Riboflavinroseoflavin transporter RibM |
| 2060 | SEQF6854.1_KV820092.1 | SEQF6854.1_02121 JB | 1476 [NA] | 491 [AA] | 672282-673757 | hypothetical protein | |
| 2061 | SEQF6854.1_KV820092.1 | SEQF6854.1_02122 JB | 1269 [NA] | 422 [AA] | 673966-675234 | fabF_2 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 |
| 2062 | SEQF6854.1_KV820092.1 | SEQF6854.1_02123 JB | 243 [NA] | 80 [AA] | 675323-675565 | acpP_2 | Acyl carrier protein |
| 2063 | SEQF6854.1_KV820092.1 | SEQF6854.1_02124 JB | 1026 [NA] | 341 [AA] | 675768-676793 | fabH_2 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 |
| 2064 | SEQF6854.1_KV820092.1 | SEQF6854.1_02125 JB | 900 [NA] | 299 [AA] | 676850-677749 | fabD | Malonyl CoA-acyl carrier protein transacylase |
| 2065 | SEQF6854.1_KV820092.1 | SEQF6854.1_02126 JB | 1071 [NA] | 356 [AA] | 678044-679114 | xerC | Tyrosine recombinase XerC |
| 2066 | SEQF6854.1_KV820092.1 | SEQF6854.1_02127 JB | 1485 [NA] | 494 [AA] | 679175-680659 | hypothetical protein | |
| 2067 | SEQF6854.1_KV820092.1 | SEQF6854.1_02128 JB | 1545 [NA] | 514 [AA] | 680710-682254 | comM | Competence protein ComM |
| 2068 | SEQF6854.1_KV820092.1 | SEQF6854.1_02129 JB | 447 [NA] | 148 [AA] | 682254-682700 | hypothetical protein | |
| 2069 | SEQF6854.1_KV820092.1 | SEQF6854.1_02130 JB | 336 [NA] | 111 [AA] | 682980-683315 | putative protein | |
| 2070 | SEQF6854.1_KV820092.1 | SEQF6854.1_02131 JB | 795 [NA] | 264 [AA] | 683315-684109 | rnhB | Ribonuclease HII |
| 2071 | SEQF6854.1_KV820092.1 | SEQF6854.1_02132 JB | 1131 [NA] | 376 [AA] | 684273-685403 | hypothetical protein | |
| 2072 | SEQF6854.1_KV820092.1 | SEQF6854.1_02133 JB | 633 [NA] | 210 [AA] | 685509-686141 | lepB | Signal peptidase I |
| 2073 | SEQF6854.1_KV820092.1 | SEQF6854.1_02134 JB | 348 [NA] | 115 [AA] | 686164-686511 | rplS | 50S ribosomal protein L19 |
| 2074 | SEQF6854.1_KV820092.1 | SEQF6854.1_02135 JB | 636 [NA] | 211 [AA] | 686767-687402 | orn | Oligoribonuclease |
| 2075 | SEQF6854.1_KV820092.1 | SEQF6854.1_02136 JB | 1644 [NA] | 547 [AA] | 687659-689302 | Alpha-(1->6)-mannopyranosyltransferase | |
| 2076 | SEQF6854.1_KV820092.1 | SEQF6854.1_02138 JB | 906 [NA] | 301 [AA] | 689652-690557 | hypothetical protein | |
| 2077 | SEQF6854.1_KV820092.1 | SEQF6854.1_02139 JB | 663 [NA] | 220 [AA] | 690942-691604 | Single-stranded DNA-binding protein | |
| 2078 | SEQF6854.1_KV820092.1 | SEQF6854.1_02141 JB | 1161 [NA] | 386 [AA] | 691908-693068 | acdA | Acyl-CoA dehydrogenase |
| 2079 | SEQF6854.1_KV820092.1 | SEQF6854.1_02142 JB | 573 [NA] | 190 [AA] | 693130-693702 | def_2 | Peptide deformylase |
| 2080 | SEQF6854.1_KV820092.1 | SEQF6854.1_02144 JB | 786 [NA] | 261 [AA] | 694243-695028 | yaaA | Peroxide stress resistance protein YaaA |
| 2081 | SEQF6854.1_KV820092.1 | SEQF6854.1_02145 JB | 759 [NA] | 252 [AA] | 695300-696058 | hypothetical protein | |
| 2082 | SEQF6854.1_KV820092.1 | SEQF6854.1_02146 JB | 891 [NA] | 296 [AA] | 696228-697118 | hypothetical protein | |
| 2083 | SEQF6854.1_KV820092.1 | SEQF6854.1_02147 JB | 525 [NA] | 174 [AA] | 697253-697777 | msrA2 | Peptide methionine sulfoxide reductase MsrA 2 |
| 2084 | SEQF6854.1_KV820092.1 | SEQF6854.1_02148 JB | 768 [NA] | 255 [AA] | 697912-698679 | hypothetical protein | |
| 2085 | SEQF6854.1_KV820092.1 | SEQF6854.1_02149 JB | 768 [NA] | 255 [AA] | 698809-699576 | hypothetical protein | |
| 2086 | SEQF6854.1_KV820092.1 | SEQF6854.1_02151 JB | 348 [NA] | 115 [AA] | 704402-704749 | hypothetical protein | |
| 2087 | SEQF6854.1_KV820092.1 | SEQF6854.1_02152 JB | 939 [NA] | 312 [AA] | 704749-705687 | ygbT | CRISPR-associated endonuclease Cas1 |
| 2088 | SEQF6854.1_KV820092.1 | SEQF6854.1_02153 JB | 666 [NA] | 221 [AA] | 705798-706463 | cse3 | CRISPR-associated endoribonuclease Cse3 |
| 2089 | SEQF6854.1_KV820092.1 | SEQF6854.1_02154 JB | 702 [NA] | 233 [AA] | 706460-707161 | hypothetical protein | |
| 2090 | SEQF6854.1_KV820092.1 | SEQF6854.1_02155 JB | 1134 [NA] | 377 [AA] | 707164-708297 | casC | CRISPR system Cascade subunit CasC |
| 2091 | SEQF6854.1_KV820092.1 | SEQF6854.1_02156 JB | 624 [NA] | 207 [AA] | 708315-708938 | hypothetical protein | |
| 2092 | SEQF6854.1_KV820092.1 | SEQF6854.1_02157 JB | 1716 [NA] | 571 [AA] | 708931-710646 | hypothetical protein | |
| 2093 | SEQF6854.1_KV820092.1 | SEQF6854.1_02158 JB | 3018 [NA] | 1005 [AA] | 710985-714002 | cas3 | CRISPR-associated nucleasehelicase Cas3 |
| 2094 | SEQF6854.1_KV820092.1 | SEQF6854.1_02162 JB | 1053 [NA] | 350 [AA] | 714553-715605 | zapE | Cell division protein ZapE |
| 2095 | SEQF6854.1_KV820092.1 | SEQF6854.1_02163 JB | 1812 [NA] | 603 [AA] | 715845-717656 | dipZ | Protein DipZ |
| 2096 | SEQF6854.1_KV820092.1 | SEQF6854.1_02164 JB | 378 [NA] | 125 [AA] | 718016-718393 | hypothetical protein | |
| 2097 | SEQF6854.1_KV820092.1 | SEQF6854.1_02165 JB | 630 [NA] | 209 [AA] | 718509-719138 | sigK | ECF RNA polymerase sigma factor SigK |
| 2098 | SEQF6854.1_KV820092.1 | SEQF6854.1_02166 JB | 927 [NA] | 308 [AA] | 719128-720054 | hypothetical protein | |
| 2099 | SEQF6854.1_KV820092.1 | SEQF6854.1_02167 JB | 501 [NA] | 166 [AA] | 720143-720643 | ybaK | Cys-tRNA(Pro)Cys-tRNA(Cys) deacylase YbaK |
| 2100 | SEQF6854.1_KV820092.1 | SEQF6854.1_02168 JB | 555 [NA] | 184 [AA] | 720624-721178 | hypothetical protein | |
| 2101 | SEQF6854.1_KV820092.1 | SEQF6854.1_02169 JB | 417 [NA] | 138 [AA] | 721217-721633 | msrB | Peptide methionine sulfoxide reductase MsrB |
| 2102 | SEQF6854.1_KV820092.1 | SEQF6854.1_02170 JB | 1275 [NA] | 424 [AA] | 721806-723080 | rnd | Ribonuclease D |
| 2103 | SEQF6854.1_KV820092.1 | SEQF6854.1_02171 JB | 522 [NA] | 173 [AA] | 723273-723794 | petC | Cytochrome b6-f complex iron-sulfur subunit |
| 2104 | SEQF6854.1_KV820092.1 | SEQF6854.1_02172 JB | 2010 [NA] | 669 [AA] | 723932-725941 | dxs | 1-deoxy-D-xylulose-5-phosphate synthase |
| 2105 | SEQF6854.1_KV820092.1 | SEQF6854.1_02173 JB | 1635 [NA] | 544 [AA] | 726106-727740 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD |
| 2106 | SEQF6854.1_KV820092.1 | SEQF6854.1_02174 JB | 2046 [NA] | 681 [AA] | 727852-729897 | kimA | Potassium transporter KimA |
| 2107 | SEQF6854.1_KV820092.1 | SEQF6854.1_02175 JB | 768 [NA] | 255 [AA] | 730031-730798 | trkA_1 | Trk system potassium uptake protein TrkA |
| 2108 | SEQF6854.1_KV820092.1 | SEQF6854.1_02176 JB | 654 [NA] | 217 [AA] | 730811-731464 | trkA_2 | Trk system potassium uptake protein TrkA |
| 2109 | SEQF6854.1_KV820092.1 | SEQF6854.1_02177 JB | 2106 [NA] | 701 [AA] | 731581-733686 | hypothetical protein | |
| 2110 | SEQF6854.1_KV820092.1 | SEQF6854.1_02178 JB | 741 [NA] | 246 [AA] | 733775-734515 | hypothetical protein | |
| 2111 | SEQF6854.1_KV820092.1 | SEQF6854.1_02179 JB | 558 [NA] | 185 [AA] | 734508-735065 | hypothetical protein | |
| 2112 | SEQF6854.1_KV820092.1 | SEQF6854.1_02180 JB | 864 [NA] | 287 [AA] | 735065-735928 | hypothetical protein | |
| 2113 | SEQF6854.1_KV820092.1 | SEQF6854.1_02181 JB | 447 [NA] | 148 [AA] | 736037-736483 | dut | Deoxyuridine 5-triphosphate nucleotidohydrolase |
| 2114 | SEQF6854.1_KV820092.1 | SEQF6854.1_02182 JB | 450 [NA] | 149 [AA] | 736693-737142 | hypothetical protein | |
| 2115 | SEQF6854.1_KV820092.1 | SEQF6854.1_02183 JB | 300 [NA] | 99 [AA] | 737209-737508 | hypothetical protein | |
| 2116 | SEQF6854.1_KV820092.1 | SEQF6854.1_02184 JB | 1074 [NA] | 357 [AA] | 737850-738923 | hypothetical protein | |
| 2117 | SEQF6854.1_KV820092.1 | SEQF6854.1_02185 JB | 1245 [NA] | 414 [AA] | 738983-740227 | hypothetical protein | |
| 2118 | SEQF6854.1_KV820092.1 | SEQF6854.1_02186 JB | 597 [NA] | 198 [AA] | 740229-740825 | hypothetical protein | |
| 2119 | SEQF6854.1_KV820092.1 | SEQF6854.1_02187 JB | 2529 [NA] | 842 [AA] | 741039-743567 | gyrA_2 | DNA gyrase subunit A |