Genome Explorer: Lactobacillus crispatus RL03 (SEQF4705.1)
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NCBI Annotation for SEQF4705.1
| Genome selected: Lactobacillus crispatus RL03 | |||
| Contigs: | 330 | Bases: | 2550531 bps |
| CDS: | 169 | rRNA: | 8 |
| tmRNA: | 1 | tRNA: | 65 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2501 | NKLQ01000284.1 | TDN28591.1 JB | 288 [NA] | 95 [AA] | 4670-4957 | CEE74_13635 | hypothetical protein |
| 2502 | NKLQ01000284.1 | TDN28592.1 JB | 192 [NA] | 63 [AA] | 4031-4222 | CEE74_13625 | hypothetical protein |
| 2503 | NKLQ01000285.1 | TDN28559.1 JB | 207 [NA] | 68 [AA] | <1-207 | CEE74_13645 | hypothetical protein |
| 2504 | NKLQ01000285.1 | TDN28560.1 JB | 660 [NA] | 219 [AA] | 191-850 | CEE74_13650 | LacI family transcriptional regulator |
| 2505 | NKLQ01000285.1 | TDN28561.1 JB | 3780 [NA] | 1259 [AA] | 1184-4963 | CEE74_13655 | type I pullulanase |
| 2506 | NKLQ01000285.1 | TDN28562.1 JB | 228 [NA] | 75 [AA] | 5198->5427 | CEE74_13660 | transposase |
| 2507 | NKLQ01000286.1 | TDN28541.1 JB | 768 [NA] | 255 [AA] | <1-770 | CEE74_13665 | IS256 family transposase |
| 2508 | NKLQ01000286.1 | TDN28542.1 JB | 795 [NA] | 264 [AA] | 952-1746 | CEE74_13670 | ABC transporter ATP-binding protein |
| 2509 | NKLQ01000286.1 | TDN28543.1 JB | 1209 [NA] | 402 [AA] | 1762-2970 | CEE74_13675 | Fe-S cluster assembly protein SufD |
| 2510 | NKLQ01000286.1 | TDN28544.1 JB | 1239 [NA] | 412 [AA] | 2951-4189 | CEE74_13680 | cysteine desulfurase |
| 2511 | NKLQ01000286.1 | TDN28545.1 JB | 462 [NA] | 153 [AA] | 4176-4637 | CEE74_13685 | iron-sulfur cluster assembly scaffold protein |
| 2512 | NKLQ01000286.1 | TDN28546.1 JB | 1404 [NA] | 467 [AA] | 4630-6033 | CEE74_13690 | Fe-S cluster assembly protein SufB |
| 2513 | NKLQ01000286.1 | TDN28547.1 JB | 324 [NA] | 107 [AA] | 6033-6356 | CEE74_13695 | DNA methyltransferase |
| 2514 | NKLQ01000286.1 | TDN28548.1 JB | 1509 [NA] | 502 [AA] | 6368-7876 | CEE74_13700 | divalent metal cation transporter |
| 2515 | NKLQ01000287.1 | TDN28523.1 JB | 2574 [NA] | 857 [AA] | 156-2729 | CEE74_13715 | type II CRISPR RNA-guided endonuclease Cas9 |
| 2516 | NKLQ01000288.1 | TDN28517.1 JB | 1371 [NA] | 456 [AA] | 126-1496 | CEE74_13720 | IS4/IS5 family transposase |
| 2517 | NKLQ01000289.1 | TDN28504.1 JB | 274 [NA] | 91 [AA] | <1->275 | CEE74_13725 | hypothetical protein |
| 2518 | NKLQ01000290.1 | TDN28490.1 JB | 333 [NA] | 110 [AA] | 210-542 | CEE74_13730 | hypothetical protein |
| 2519 | NKLQ01000290.1 | TDN28491.1 JB | 228 [NA] | 75 [AA] | 563-790 | CEE74_13735 | hypothetical protein |
| 2520 | NKLQ01000290.1 | TDN28492.1 JB | 228 [NA] | 76 [AA] | 805->1032 | CEE74_13740 | hypothetical protein |
| 2521 | NKLQ01000291.1 | TDN28480.1 JB | 328 [NA] | 109 [AA] | <1->330 | CEE74_13745 | IS982 family transposase |
| 2522 | NKLQ01000292.1 | TDN28461.1 JB | 251 [NA] | 84 [AA] | <1-251 | CEE74_13750 | IS982 family transposase |
| 2523 | NKLQ01000292.1 | TDN28462.1 JB | 240 [NA] | 79 [AA] | 430-669 | CEE74_13755 | hypothetical protein |
| 2524 | NKLQ01000293.1 | TDN28458.1 JB | 903 [NA] | 300 [AA] | 105->1007 | CEE74_13760 | IS256 family transposase |
| 2525 | NKLQ01000294.1 | TDN28434.1 JB | 621 [NA] | 206 [AA] | 248-868 | CEE74_13765 | type II CRISPR RNA-guided endonuclease Cas9 |
| 2526 | NKLQ01000294.1 | TDN28435.1 JB | 1044 [NA] | 347 [AA] | 822-1865 | CEE74_13770 | hypothetical protein |
| 2527 | NKLQ01000294.1 | TDN28436.1 JB | 306 [NA] | 101 [AA] | 2955-3260 | CEE74_13780 | CRISPR-associated endonuclease Cas2 |
| 2528 | NKLQ01000294.1 | TDN28437.1 JB | 435 [NA] | 144 [AA] | 3257-3691 | CEE74_13785 | type II-A CRISPR-associated protein Csn2 |
| 2529 | NKLQ01000294.1 | TDN28438.1 JB | 379 [NA] | 126 [AA] | 3813->4191 | CEE74_13795 | IS256 family transposase |
| 2530 | NKLQ01000294.1 | TDN28439.1 JB | 909 [NA] | 302 [AA] | 2069-2977 | CEE74_13775 | subtype II CRISPR-associated endonuclease Cas1 |
| 2531 | NKLQ01000295.1 | TDN28422.1 JB | 813 [NA] | 270 [AA] | 1107-1919 | CEE74_13805 | transcriptional regulator |
| 2532 | NKLQ01000295.1 | TDN28423.1 JB | 837 [NA] | 278 [AA] | 2010-2846 | CEE74_13810 | transcriptional regulator |
| 2533 | NKLQ01000295.1 | TDN28424.1 JB | 210 [NA] | 69 [AA] | 3210-3419 | CEE74_13815 | peptidase |
| 2534 | NKLQ01000295.1 | TDN28425.1 JB | 240 [NA] | 79 [AA] | 3482-3721 | CEE74_13820 | hypothetical protein |
| 2535 | NKLQ01000296.1 | TDN28363.1 JB | 159 [NA] | 52 [AA] | 310-468 | CEE74_13830 | XkdX family protein |
| 2536 | NKLQ01000296.1 | TDN28364.1 JB | 414 [NA] | 137 [AA] | 468-881 | CEE74_13835 | hypothetical protein |
| 2537 | NKLQ01000296.1 | TDN28365.1 JB | 633 [NA] | 210 [AA] | 1086-1718 | CEE74_13840 | hypothetical protein |
| 2538 | NKLQ01000296.1 | TDN28366.1 JB | 468 [NA] | 155 [AA] | 1854-2321 | CEE74_13845 | enterobactin-iron receptor |
| 2539 | NKLQ01000296.1 | TDN28367.1 JB | 1650 [NA] | 549 [AA] | 2335-3984 | CEE74_13850 | DUF2479 domain-containing protein |
| 2540 | NKLQ01000296.1 | TDN28368.1 JB | 3327 [NA] | 1108 [AA] | 4138-7464 | CEE74_13860 | hypothetical protein |
| 2541 | NKLQ01000296.1 | TDN28369.1 JB | 780 [NA] | 259 [AA] | 7464-8243 | CEE74_13865 | phage tail protein |
| 2542 | NKLQ01000296.1 | TDN28370.1 JB | 6480 [NA] | 2159 [AA] | 8227-14706 | CEE74_13870 | phage tail protein |
| 2543 | NKLQ01000296.1 | TDN28371.1 JB | 345 [NA] | 114 [AA] | 14924-15268 | CEE74_13880 | hypothetical protein |
| 2544 | NKLQ01000296.1 | TDN28372.1 JB | 705 [NA] | 234 [AA] | 15368-16072 | CEE74_13885 | phage tail protein |
| 2545 | NKLQ01000296.1 | TDN28373.1 JB | 390 [NA] | 129 [AA] | 16054-16443 | CEE74_13890 | hypothetical protein |
| 2546 | NKLQ01000296.1 | TDN28374.1 JB | 441 [NA] | 146 [AA] | 16440-16880 | CEE74_13895 | hypothetical protein |
| 2547 | NKLQ01000296.1 | TDN28375.1 JB | 351 [NA] | 116 [AA] | 16873-17223 | CEE74_13900 | head-tail adaptor protein |
| 2548 | NKLQ01000296.1 | TDN28376.1 JB | 363 [NA] | 120 [AA] | 17186-17548 | CEE74_13905 | hypothetical protein |
| 2549 | NKLQ01000296.1 | TDN28377.1 JB | 1311 [NA] | 436 [AA] | 17569-18879 | CEE74_13910 | phage major capsid protein |
| 2550 | NKLQ01000296.1 | TDN28378.1 JB | 711 [NA] | 236 [AA] | 18894-19604 | CEE74_13915 | peptidase |
| 2551 | NKLQ01000296.1 | TDN28379.1 JB | 1185 [NA] | 394 [AA] | 19564-20748 | CEE74_13920 | phage portal protein |
| 2552 | NKLQ01000296.1 | TDN28380.1 JB | 195 [NA] | 64 [AA] | 20751-20945 | CEE74_13925 | hypothetical protein |
| 2553 | NKLQ01000296.1 | TDN28381.1 JB | 1899 [NA] | 632 [AA] | 20935-22833 | CEE74_13930 | terminase |
| 2554 | NKLQ01000296.1 | TDN28382.1 JB | 453 [NA] | 150 [AA] | 23090-23542 | CEE74_13935 | terminase |
| 2555 | NKLQ01000296.1 | TDN28383.1 JB | 546 [NA] | 181 [AA] | 23699-24244 | CEE74_13940 | restriction endonuclease |
| 2556 | NKLQ01000296.1 | TDN28384.1 JB | 465 [NA] | 154 [AA] | 24565-25029 | CEE74_13945 | ArpU family transcriptional regulator |
| 2557 | NKLQ01000296.1 | TDN28385.1 JB | 339 [NA] | 112 [AA] | 25211-25549 | CEE74_13950 | VRR-NUC domain-containing protein |
| 2558 | NKLQ01000296.1 | TDN28386.1 JB | 279 [NA] | 92 [AA] | 25539-25817 | CEE74_13955 | hypothetical protein |
| 2559 | NKLQ01000296.1 | TDN28387.1 JB | 285 [NA] | 94 [AA] | 25807-26091 | CEE74_13960 | hypothetical protein |
| 2560 | NKLQ01000296.1 | TDN28388.1 JB | 237 [NA] | 78 [AA] | 26091-26327 | CEE74_13965 | hypothetical protein |
| 2561 | NKLQ01000296.1 | TDN28389.1 JB | 231 [NA] | 76 [AA] | 26308-26538 | CEE74_13970 | hypothetical protein |
| 2562 | NKLQ01000296.1 | TDN28390.1 JB | 231 [NA] | 76 [AA] | 26531-26761 | CEE74_13975 | hypothetical protein |
| 2563 | NKLQ01000296.1 | TDN28391.1 JB | 216 [NA] | 71 [AA] | 26860-27075 | CEE74_13980 | hypothetical protein |
| 2564 | NKLQ01000296.1 | TDN28392.1 JB | 294 [NA] | 97 [AA] | 27089-27382 | CEE74_13985 | hypothetical protein |
| 2565 | NKLQ01000296.1 | TDN28393.1 JB | 267 [NA] | 88 [AA] | 27685-27951 | CEE74_13990 | hypothetical protein |
| 2566 | NKLQ01000296.1 | TDN28394.1 JB | 195 [NA] | 64 [AA] | 28051-28245 | CEE74_13995 | hypothetical protein |
| 2567 | NKLQ01000296.1 | TDN28395.1 JB | 2325 [NA] | 774 [AA] | 28495-30819 | CEE74_14000 | DNA primase |
| 2568 | NKLQ01000296.1 | TDN28396.1 JB | 552 [NA] | 183 [AA] | 30831-31382 | CEE74_14005 | hypothetical protein |
| 2569 | NKLQ01000296.1 | TDN28397.1 JB | 282 [NA] | 93 [AA] | 32896-33177 | CEE74_14015 | hypothetical protein |
| 2570 | NKLQ01000296.1 | TDN28398.1 JB | 711 [NA] | 236 [AA] | 33177-33887 | CEE74_14020 | DNA-binding protein |
| 2571 | NKLQ01000296.1 | TDN28399.1 JB | 249 [NA] | 82 [AA] | 33887-34135 | CEE74_14025 | hypothetical protein |
| 2572 | NKLQ01000296.1 | TDN28400.1 JB | 297 [NA] | 98 [AA] | 34128-34424 | CEE74_14030 | hypothetical protein |
| 2573 | NKLQ01000296.1 | TDN28401.1 JB | 327 [NA] | 108 [AA] | 34396-34722 | CEE74_14035 | hypothetical protein |
| 2574 | NKLQ01000296.1 | TDN28402.1 JB | 216 [NA] | 71 [AA] | 35026-35241 | CEE74_14040 | DNA-binding protein |
| 2575 | NKLQ01000296.1 | TDN28403.1 JB | 192 [NA] | 63 [AA] | 35258-35449 | CEE74_14045 | transcriptional regulator |
| 2576 | NKLQ01000296.1 | TDN28404.1 JB | 213 [NA] | 70 [AA] | 35513-35725 | CEE74_14050 | hypothetical protein |
| 2577 | NKLQ01000296.1 | TDN28405.1 JB | 312 [NA] | 103 [AA] | 35673-35984 | CEE74_14055 | hypothetical protein |
| 2578 | NKLQ01000296.1 | TDN28406.1 JB | 186 [NA] | 61 [AA] | 3950-4135 | CEE74_13855 | hypothetical protein |
| 2579 | NKLQ01000296.1 | TDN28407.1 JB | 183 [NA] | 60 [AA] | 14710-14892 | CEE74_13875 | hypothetical protein |
| 2580 | NKLQ01000297.1 | TDN28338.1 JB | 615 [NA] | 204 [AA] | 182-796 | CEE74_14060 | fibronectin-binding protein |
| 2581 | NKLQ01000298.1 | TDN28331.1 JB | 669 [NA] | 222 [AA] | 331-999 | CEE74_14065 | hypothetical protein |
| 2582 | NKLQ01000298.1 | TDN28332.1 JB | 714 [NA] | 237 [AA] | 1015-1728 | CEE74_14070 | hypothetical protein |
| 2583 | NKLQ01000298.1 | TDN28333.1 JB | 537 [NA] | 178 [AA] | 1759-2295 | CEE74_14075 | hypothetical protein |
| 2584 | NKLQ01000298.1 | TDN28334.1 JB | 1173 [NA] | 390 [AA] | 2378-3550 | CEE74_14080 | DNA polymerase III subunit beta |
| 2585 | NKLQ01000299.1 | TDN28316.1 JB | 542 [NA] | 180 [AA] | <1-542 | CEE74_14085 | IS30 family transposase |
| 2586 | NKLQ01000300.1 | TDN28314.1 JB | 1230 [NA] | 409 [AA] | 512-1741 | CEE74_14095 | hypothetical protein |
| 2587 | NKLQ01000301.1 | TDN28304.1 JB | 405 [NA] | 135 [AA] | 8->412 | CEE74_14105 | alpha/beta hydrolase |
| 2588 | NKLQ01000302.1 | TDN28292.1 JB | 768 [NA] | 255 [AA] | <1-770 | CEE74_14110 | IS256 family transposase |
| 2589 | NKLQ01000302.1 | TDN28293.1 JB | 1809 [NA] | 602 [AA] | 1255-3063 | CEE74_14115 | hypothetical protein |
| 2590 | NKLQ01000302.1 | TDN28294.1 JB | 1944 [NA] | 647 [AA] | 3238-5181 | CEE74_14120 | YSIRK signal domain/LPXTG anchor domain surface protein |
| 2591 | NKLQ01000302.1 | TDN28295.1 JB | 495 [NA] | 164 [AA] | 5225->5721 | CEE74_14125 | IS982 family transposase |
| 2592 | NKLQ01000303.1 | TDN28270.1 JB | 758 [NA] | 253 [AA] | <1-758 | CEE74_14130 | IS256 family transposase |
| 2593 | NKLQ01000303.1 | TDN28271.1 JB | 564 [NA] | 187 [AA] | 886-1449 | CEE74_14135 | site-specific integrase |
| 2594 | NKLQ01000303.1 | TDN28272.1 JB | 378 [NA] | 125 [AA] | 1790-2167 | CEE74_14140 | MazF/PemK family toxin |
| 2595 | NKLQ01000303.1 | TDN28273.1 JB | 246 [NA] | 81 [AA] | 2167-2412 | CEE74_14145 | hypothetical protein |
| 2596 | NKLQ01000303.1 | TDN28274.1 JB | 350 [NA] | 116 [AA] | 2782->3131 | CEE74_14150 | IS30 family transposase |
| 2597 | NKLQ01000304.1 | TDN28255.1 JB | 504 [NA] | 167 [AA] | 85-588 | CEE74_14155 | hypothetical protein |
| 2598 | NKLQ01000305.1 | TDN28252.1 JB | 759 [NA] | 252 [AA] | 42-800 | CEE74_14160 | DeoR/GlpR transcriptional regulator |
| 2599 | NKLQ01000305.1 | TDN28253.1 JB | 189 [NA] | 62 [AA] | 2226-2414 | CEE74_14170 | hypothetical protein |
| 2600 | NKLQ01000306.1 | TDN28228.1 JB | 102 [NA] | 33 [AA] | <1-104 | CEE74_14175 | transposase |
| 2601 | NKLQ01000306.1 | TDN28229.1 JB | 1017 [NA] | 338 [AA] | 364-1380 | CEE74_14180 | hypothetical protein |
| 2602 | NKLQ01000306.1 | TDN28230.1 JB | 897 [NA] | 298 [AA] | 1402-2298 | CEE74_14185 | hypothetical protein |
| 2603 | NKLQ01000306.1 | TDN28231.1 JB | 228 [NA] | 75 [AA] | 2995->3224 | CEE74_14190 | transposase |
| 2604 | NKLQ01000307.1 | TDN28224.1 JB | 513 [NA] | 170 [AA] | 126-638 | CEE74_14200 | CPBP family intramembrane metalloprotease |
| 2605 | NKLQ01000307.1 | TDN28225.1 JB | 1317 [NA] | 438 [AA] | 616-1932 | CEE74_14205 | streptolysin associated protein SagD |
| 2606 | NKLQ01000307.1 | TDN28226.1 JB | 477 [NA] | 158 [AA] | 1913-2389 | CEE74_14210 | hypothetical protein |
| 2607 | NKLQ01000308.1 | TDN28206.1 JB | 1404 [NA] | 467 [AA] | 53-1456 | CEE74_14215 | transposase |
| 2608 | NKLQ01000310.1 | TDN28192.1 JB | 406 [NA] | 135 [AA] | <1->408 | CEE74_14225 | IS256 family transposase |
| 2609 | NKLQ01000311.1 | TDN28187.1 JB | 253 [NA] | 84 [AA] | <1->255 | CEE74_14230 | IS256 family transposase |
| 2610 | NKLQ01000313.1 | TDN28176.1 JB | 306 [NA] | 101 [AA] | 762-1067 | CEE74_14245 | hypothetical protein |
| 2611 | NKLQ01000313.1 | TDN28177.1 JB | 756 [NA] | 251 [AA] | 1045-1800 | CEE74_14250 | ABC transporter permease |
| 2612 | NKLQ01000314.1 | TDN28171.1 JB | 1299 [NA] | 432 [AA] | 533-1831 | CEE74_14255 | group II intron reverse transcriptase/maturase |
| 2613 | NKLQ01000316.1 | TDN28153.1 JB | 412 [NA] | 137 [AA] | <1->412 | CEE74_14280 | hypothetical protein |
| 2614 | NKLQ01000317.1 | TDN28147.1 JB | 1371 [NA] | 456 [AA] | 171-1541 | CEE74_14285 | IS4/IS5 family transposase |
| 2615 | NKLQ01000318.1 | TDN28138.1 JB | 156 [NA] | 51 [AA] | <1-158 | CEE74_14290 | IS30 family transposase |
| 2616 | NKLQ01000318.1 | TDN28139.1 JB | 927 [NA] | 308 [AA] | 173-1099 | CEE74_14295 | LysR family transcriptional regulator |
| 2617 | NKLQ01000318.1 | TDN28140.1 JB | 699 [NA] | 232 [AA] | 3012-3710 | CEE74_14305 | diguanylate cyclase |
| 2618 | NKLQ01000319.1 | TDN28090.1 JB | 1242 [NA] | 413 [AA] | 47-1288 | CEE74_14315 | IS110 family transposase |
| 2619 | NKLQ01000320.1 | TDN28080.1 JB | 156 [NA] | 51 [AA] | <1-158 | CEE74_14320 | IS30 family transposase |
| 2620 | NKLQ01000320.1 | TDN28081.1 JB | 459 [NA] | 152 [AA] | 160-618 | CEE74_14325 | hypothetical protein |
| 2621 | NKLQ01000320.1 | TDN28082.1 JB | 483 [NA] | 160 [AA] | 951-1433 | CEE74_14330 | hypothetical protein |
| 2622 | NKLQ01000321.1 | TDN28077.1 JB | 357 [NA] | 119 [AA] | <1-357 | CEE74_14335 | ABC transporter ATP-binding protein |
| 2623 | NKLQ01000321.1 | TDN28078.1 JB | 861 [NA] | 286 [AA] | 634->1495 | CEE74_14340 | transposase |
| 2624 | NKLQ01000322.1 | TDN28075.1 JB | 1350 [NA] | 449 [AA] | 56-1405 | CEE74_14345 | transposase |
| 2625 | NKLQ01000324.1 | TDN28039.1 JB | 1227 [NA] | 408 [AA] | 31-1257 | CEE74_14350 | IS110 family transposase |
| 2626 | NKLQ01000325.1 | TDN28037.1 JB | 1035 [NA] | 344 [AA] | 225-1259 | CEE74_14355 | IS30 family transposase |
| 2627 | NKLQ01000326.1 | TDN28004.1 JB | 278 [NA] | 93 [AA] | <1->278 | CEE74_14360 | IS256 family transposase |
| 2628 | NKLQ01000327.1 | TDN28002.1 JB | 210 [NA] | 69 [AA] | 21-230 | CEE74_14365 | transposase |
| 2629 | NKLQ01000328.1 | TDN28000.1 JB | 211 [NA] | 70 [AA] | <1->211 | CEE74_14375 | IS256 family transposase |
| 2630 | NKLQ01000329.1 | TDN27996.1 JB | 1146 [NA] | 381 [AA] | 29-1174 | CEE74_14380 | IS256 family transposase |
| 2631 | NKLQ01000330.1 | TDN27994.1 JB | 561 [NA] | 186 [AA] | <1-562 | CEE74_14385 | hypothetical protein |