Genome Explorer: Aggregatibacter aphrophilus C2008001229 (SEQF4337.1)
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NCBI Annotation for SEQF4337.1
| Genome selected: Aggregatibacter aphrophilus C2008001229 | |||
| Contigs: | 33 | Bases: | 2288398 bps |
| CDS: | 69 | rRNA: | 11 |
| tmRNA: | 1 | tRNA: | 50 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | QEPV01000013.1 | RDE89522.1 JB | 330 [NA] | 109 [AA] | 8920-9249 | DPW01_10575 | Grx4 family monothiol glutaredoxin |
| 2002 | QEPV01000013.1 | RDE89523.1 JB | 453 [NA] | 150 [AA] | 9374-9826 | DPW01_10580 | DUF441 domain-containing protein |
| 2003 | QEPV01000013.1 | RDE89524.1 JB | 384 [NA] | 127 [AA] | 9827-10210 | DPW01_10585 | DUF423 domain-containing protein |
| 2004 | QEPV01000013.1 | RDE89525.1 JB | 4008 [NA] | 1335 [AA] | 10213-14220 | DPW01_10590 | ATP-dependent RNA helicase HrpA |
| 2005 | QEPV01000013.1 | RDE89526.1 JB | 840 [NA] | 279 [AA] | 14201-15040 | DPW01_10595 | hypothetical protein |
| 2006 | QEPV01000013.1 | RDE89527.1 JB | 312 [NA] | 103 [AA] | 15208-15519 | DPW01_10600 | cytochrome c |
| 2007 | QEPV01000013.1 | RDE89528.1 JB | 504 [NA] | 167 [AA] | 15531-16034 | DPW01_10605 | TlpA family protein disulfide reductase |
| 2008 | QEPV01000013.1 | RDE89529.1 JB | 684 [NA] | 227 [AA] | 16015-16698 | DPW01_10610 | ABC transporter ATP-binding protein |
| 2009 | QEPV01000013.1 | RDE89530.1 JB | 1140 [NA] | 379 [AA] | 16700-17839 | DPW01_10615 | ABC transporter permease |
| 2010 | QEPV01000013.1 | RDE89531.1 JB | 1326 [NA] | 441 [AA] | 17826-19151 | DPW01_10620 | ABC transporter permease |
| 2011 | QEPV01000013.1 | RDE89532.1 JB | 1419 [NA] | 472 [AA] | 19154-20572 | DPW01_10625 | DUF2318 domain-containing protein |
| 2012 | QEPV01000013.1 | RDE89533.1 JB | 522 [NA] | 173 [AA] | 20756-21277 | DPW01_10630 | iron transporter |
| 2013 | QEPV01000013.1 | RDE89534.1 JB | 1908 [NA] | 635 [AA] | 21321-23228 | DPW01_10635 | FTR1 family iron permease |
| 2014 | QEPV01000013.1 | RDE89535.1 JB | 732 [NA] | 243 [AA] | 25583-26314 | DPW01_10650 | (Fe-S)-binding protein |
| 2015 | QEPV01000013.1 | RDE89536.1 JB | 1599 [NA] | 532 [AA] | 26469-28067 | DPW01_10655 | L-lactate permease |
| 2016 | QEPV01000013.1 | RDE89537.1 JB | 2394 [NA] | 797 [AA] | 28497-30890 | DPW01_10660 | penicillin-binding protein 1B |
| 2017 | QEPV01000013.1 | RDE89538.1 JB | 363 [NA] | 120 [AA] | 30925-31287 | DPW01_10665 | UPF0231 family protein |
| 2018 | QEPV01000013.1 | RDE89539.1 JB | 342 [NA] | 113 [AA] | 31289-31630 | DPW01_10670 | iron-sulfur cluster insertion protein ErpA |
| 2019 | QEPV01000013.1 | RDE89540.1 JB | 804 [NA] | 267 [AA] | 31765-32568 | DPW01_10675 | type I methionyl aminopeptidase |
| 2020 | QEPV01000013.1 | RDE89541.1 JB | 2601 [NA] | 866 [AA] | 32635-35235 | DPW01_10680 | bifunctional uridylyltransferase/uridylyl-removing protein GlnD |
| 2021 | QEPV01000013.1 | RDE89542.1 JB | 1284 [NA] | 427 [AA] | 35306-36589 | DPW01_10685 | glutamate-1-semialdehyde-2,1-aminomutase |
| 2022 | QEPV01000013.1 | RDE89543.1 JB | 708 [NA] | 235 [AA] | 23429-24136 | DPW01_10640 | lactate utilization protein C |
| 2023 | QEPV01000013.1 | RDE89544.1 JB | 1071 [NA] | 356 [AA] | 36720-37790 | DPW01_10690 | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase |
| 2024 | QEPV01000014.1 | RDE89463.1 JB | 2361 [NA] | 786 [AA] | 502-2862 | DPW01_10715 | penicillin-binding protein 1C |
| 2025 | QEPV01000014.1 | RDE89464.1 JB | 5772 [NA] | 1923 [AA] | 2974-8745 | DPW01_10720 | alpha-2-macroglobulin family protein |
| 2026 | QEPV01000014.1 | RDE89465.1 JB | 1449 [NA] | 482 [AA] | 8788-10236 | DPW01_10725 | metalloprotease TldD |
| 2027 | QEPV01000014.1 | RDE89466.1 JB | 846 [NA] | 281 [AA] | 10451-11296 | DPW01_10730 | ModD protein |
| 2028 | QEPV01000014.1 | RDE89467.1 JB | 600 [NA] | 199 [AA] | 11306-11905 | DPW01_10735 | ATP-binding cassette domain-containing protein |
| 2029 | QEPV01000014.1 | RDE89468.1 JB | 798 [NA] | 265 [AA] | 11907-12704 | DPW01_10740 | ABC transporter permease subunit |
| 2030 | QEPV01000014.1 | RDE89469.1 JB | 738 [NA] | 245 [AA] | 12679-13416 | DPW01_10745 | molybdate ABC transporter substrate-binding protein |
| 2031 | QEPV01000014.1 | RDE89470.1 JB | 1191 [NA] | 396 [AA] | 13548-14738 | DPW01_10750 | hypothetical protein |
| 2032 | QEPV01000014.1 | RDE89471.1 JB | 699 [NA] | 232 [AA] | 14795-15493 | DPW01_10755 | NAD-dependent deacylase |
| 2033 | QEPV01000014.1 | RDE89472.1 JB | 648 [NA] | 215 [AA] | 15508-16155 | DPW01_10760 | glutaredoxin 2 |
| 2034 | QEPV01000014.1 | RDE89473.1 JB | 1476 [NA] | 491 [AA] | 16295-17770 | DPW01_10765 | ribonuclease G |
| 2035 | QEPV01000014.1 | RDE89474.1 JB | 1521 [NA] | 506 [AA] | 17916-19436 | DPW01_10770 | sodium/proline symporter PutP |
| 2036 | QEPV01000014.1 | RDE89475.1 JB | 966 [NA] | 321 [AA] | 19451-20416 | DPW01_10775 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB |
| 2037 | QEPV01000014.1 | RDE89476.1 JB | 1299 [NA] | 432 [AA] | 20502-21800 | DPW01_10780 | adenylosuccinate synthase |
| 2038 | QEPV01000014.1 | RDE89477.1 JB | 672 [NA] | 223 [AA] | 21867-22538 | DPW01_10785 | DUF484 domain-containing protein |
| 2039 | QEPV01000014.1 | RDE89478.1 JB | 268 [NA] | 89 [AA] | <1-268 | DPW01_10710 | type VI secretion system tip protein VgrG |
| 2040 | QEPV01000015.1 | RDE89409.1 JB | 624 [NA] | 207 [AA] | 184-807 | DPW01_10790 | DUF2726 domain-containing protein |
| 2041 | QEPV01000015.1 | RDE89410.1 JB | 603 [NA] | 200 [AA] | 807-1409 | DPW01_10795 | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE |
| 2042 | QEPV01000015.1 | RDE89411.1 JB | 687 [NA] | 228 [AA] | 2153-2839 | DPW01_10805 | DNA utilization protein GntX |
| 2043 | QEPV01000015.1 | RDE89412.1 JB | 816 [NA] | 271 [AA] | 2999-3814 | DPW01_10810 | Cof-type HAD-IIB family hydrolase |
| 2044 | QEPV01000015.1 | RDE89413.1 JB | 639 [NA] | 212 [AA] | 3855-4493 | DPW01_10815 | phosphoribosylglycinamide formyltransferase |
| 2045 | QEPV01000015.1 | RDE89414.1 JB | 1041 [NA] | 346 [AA] | 4493-5533 | DPW01_10820 | phosphoribosylformylglycinamidine cyclo-ligase |
| 2046 | QEPV01000015.1 | RDE89415.1 JB | 498 [NA] | 165 [AA] | 5716-6213 | DPW01_10825 | hypothetical protein |
| 2047 | QEPV01000015.1 | RDE89416.1 JB | 2571 [NA] | 856 [AA] | 6311-8881 | DPW01_10830 | ATP-dependent chaperone ClpB |
| 2048 | QEPV01000015.1 | RDE89417.1 JB | 564 [NA] | 187 [AA] | 9127-9690 | DPW01_10835 | helix-hairpin-helix domain-containing protein |
| 2049 | QEPV01000015.1 | RDE89418.1 JB | 1230 [NA] | 409 [AA] | 9843-11072 | DPW01_10840 | tyrosine transporter |
| 2050 | QEPV01000015.1 | RDE89419.1 JB | 684 [NA] | 227 [AA] | 11175-11858 | DPW01_10845 | hypothetical protein |
| 2051 | QEPV01000015.1 | RDE89420.1 JB | 1272 [NA] | 423 [AA] | 11875-13146 | DPW01_10850 | multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR |
| 2052 | QEPV01000015.1 | RDE89421.1 JB | 249 [NA] | 82 [AA] | 13232-13480 | DPW01_10855 | cytoplasmic protein |
| 2053 | QEPV01000015.1 | RDE89422.1 JB | 240 [NA] | 79 [AA] | 13509-13748 | DPW01_10860 | sulfurtransferase TusA |
| 2054 | QEPV01000015.1 | RDE89423.1 JB | 1464 [NA] | 487 [AA] | 13952-15415 | DPW01_10865 | potassium transporter |
| 2055 | QEPV01000015.1 | RDE89424.1 JB | 513 [NA] | 170 [AA] | 15415-15927 | DPW01_10870 | menaquinone-dependent protoporphyrinogen IX dehydrogenase |
| 2056 | QEPV01000015.1 | RDE89425.1 JB | 585 [NA] | 194 [AA] | 1458-2042 | DPW01_10800 | iron-sulfur cluster biogenesis protein NfuA |
| 2057 | QEPV01000016.1 | RDE89376.1 JB | 558 [NA] | 185 [AA] | 255-812 | DPW01_10875 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase |
| 2058 | QEPV01000016.1 | RDE89377.1 JB | 1038 [NA] | 345 [AA] | 1006-2043 | DPW01_10880 | D-methionine ABC transporter, ATP-binding protein |
| 2059 | QEPV01000016.1 | RDE89378.1 JB | 678 [NA] | 225 [AA] | 2033-2710 | DPW01_10885 | ABC transporter permease |
| 2060 | QEPV01000016.1 | RDE89379.1 JB | 843 [NA] | 280 [AA] | 2752-3594 | DPW01_10890 | MetQ/NlpA family lipoprotein |
| 2061 | QEPV01000016.1 | RDE89380.1 JB | 498 [NA] | 165 [AA] | 3702-4199 | DPW01_10895 | YbhB/YbcL family Raf kinase inhibitor-like protein |
| 2062 | QEPV01000016.1 | RDE89381.1 JB | 477 [NA] | 158 [AA] | 4313-4789 | DPW01_10900 | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL |
| 2063 | QEPV01000016.1 | RDE89382.1 JB | 876 [NA] | 291 [AA] | 4866-5741 | DPW01_10905 | DUF535 domain-containing protein |
| 2064 | QEPV01000016.1 | RDE89383.1 JB | 615 [NA] | 204 [AA] | 5890-6504 | DPW01_10910 | YihA family ribosome biogenesis GTP-binding protein |
| 2065 | QEPV01000016.1 | RDE89384.1 JB | 2589 [NA] | 862 [AA] | 6822-9410 | DPW01_10915 | type VI secretion system ATPase TssH |
| 2066 | QEPV01000016.1 | RDE89385.1 JB | 267 [NA] | 88 [AA] | 9765-10031 | DPW01_10920 | PAAR domain-containing protein |
| 2067 | QEPV01000017.1 | RDE89374.1 JB | 981 [NA] | 326 [AA] | 1926-2906 | DPW01_10930 | tetratricopeptide repeat protein |
| 2068 | QEPV01000017.1 | RDE89375.1 JB | 295 [NA] | 98 [AA] | 5904->6198 | DPW01_10945 | hypothetical protein |
| 2069 | QEPV01000018.1 | RDE89346.1 JB | 222 [NA] | 73 [AA] | <1-223 | DPW01_10950 | type VI secretion system tip protein VgrG |
| 2070 | QEPV01000018.1 | RDE89347.1 JB | 639 [NA] | 212 [AA] | 2638-3276 | DPW01_10965 | hypothetical protein |
| 2071 | QEPV01000018.1 | RDE89348.1 JB | 774 [NA] | 257 [AA] | 3461-4234 | DPW01_10970 | hypothetical protein |
| 2072 | QEPV01000018.1 | RDE89349.1 JB | 295 [NA] | 98 [AA] | 4270->4564 | DPW01_10975 | hypothetical protein |
| 2073 | QEPV01000020.1 | RDE89323.1 JB | 3033 [NA] | 1011 [AA] | <1->3035 | DPW01_10990 | type VI secretion system tip protein VgrG |
| 2074 | QEPV01000021.1 | RDE89321.1 JB | 996 [NA] | 331 [AA] | <1-998 | DPW01_10995 | type VI secretion system tip protein VgrG |
| 2075 | QEPV01000021.1 | RDE89322.1 JB | 285 [NA] | 94 [AA] | 1011-1295 | DPW01_11000 | hypothetical protein |
| 2076 | QEPV01000022.1 | RDE89302.1 JB | 453 [NA] | 150 [AA] | 1077-1529 | DPW01_11015 | hypothetical protein |
| 2077 | QEPV01000023.1 | RDE89301.1 JB | 1746 [NA] | 582 [AA] | <1-1746 | DPW01_11020 | type VI secretion system tip protein VgrG |
| 2078 | QEPV01000025.1 | RDE88727.1 JB | 240 [NA] | 80 [AA] | <1-240 | DPW01_11030 | type IV secretion protein Rhs |
| 2079 | QEPV01000025.1 | RDE88728.1 JB | 399 [NA] | 132 [AA] | 341-739 | DPW01_11035 | hypothetical protein |
| 2080 | QEPV01000026.1 | RDE88712.1 JB | 1418 [NA] | 473 [AA] | <1->1420 | DPW01_11045 | type VI secretion system tip protein VgrG |
| 2081 | QEPV01000027.1 | RDE88711.1 JB | 1143 [NA] | 380 [AA] | 61-1203 | DPW01_11050 | elongation factor Tu |
| 2082 | QEPV01000028.1 | RDE88690.1 JB | 1149 [NA] | 382 [AA] | 64-1212 | DPW01_11055 | IS4 family transposase |
| 2083 | QEPV01000030.1 | RDE88674.1 JB | 665 [NA] | 222 [AA] | <1->666 | DPW01_11075 | type VI secretion system tip protein VgrG |
| 2084 | QEPV01000031.1 | RDE88662.1 JB | 543 [NA] | 180 [AA] | 20-562 | DPW01_11080 | hypothetical protein |