Genome Explorer: Aggregatibacter actinomycetemcomitans SC1000 (SEQF3484.1)
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PROKKA Annotation for SEQF3484.1
| Genome selected: Aggregatibacter actinomycetemcomitans SC1000 | |||
| Contigs: | 18 | Bases: | 2099973 bps |
| CDS: | 2093 | rRNA: | 8 |
| tmRNA: | 1 | tRNA: | 49 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | SEQF3484.1_NHNH01000013.1 | SEQF3484.1_00678 JB | 540 [NA] | 179 [AA] | 28022-28561 | ogt | Methylated-DNA--protein-cysteine methyltransferase |
| 2002 | SEQF3484.1_NHNH01000013.1 | SEQF3484.1_00679 JB | 669 [NA] | 222 [AA] | 28558-29226 | mutH | DNA mismatch repair protein MutH |
| 2003 | SEQF3484.1_NHNH01000013.1 | SEQF3484.1_00680 JB | 726 [NA] | 241 [AA] | 29291-30016 | hypothetical protein | |
| 2004 | SEQF3484.1_NHNH01000013.1 | SEQF3484.1_00681 JB | 132 [NA] | 43 [AA] | 30109-30240 | hypothetical protein | |
| 2005 | SEQF3484.1_NHNH01000013.1 | SEQF3484.1_00682 JB | 174 [NA] | 57 [AA] | 30308-30481 | hypothetical protein | |
| 2006 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00683 JB | 258 [NA] | 85 [AA] | 915-1172 | rpsQ | 30S ribosomal protein S17 |
| 2007 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00684 JB | 192 [NA] | 63 [AA] | 1172-1363 | rpmC | 50S ribosomal protein L29 |
| 2008 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00685 JB | 411 [NA] | 136 [AA] | 1363-1773 | rplP | 50S ribosomal protein L16 |
| 2009 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00686 JB | 708 [NA] | 235 [AA] | 1787-2494 | rpsC | 30S ribosomal protein S3 |
| 2010 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00687 JB | 333 [NA] | 110 [AA] | 2511-2843 | rplV | 50S ribosomal protein L22 |
| 2011 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00688 JB | 276 [NA] | 91 [AA] | 2854-3129 | rpsS | 30S ribosomal protein S19 |
| 2012 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00689 JB | 822 [NA] | 273 [AA] | 3155-3976 | rplB | 50S ribosomal protein L2 |
| 2013 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00690 JB | 303 [NA] | 100 [AA] | 3997-4299 | rplW | 50S ribosomal protein L23 |
| 2014 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00691 JB | 603 [NA] | 200 [AA] | 4296-4898 | rplD | 50S ribosomal protein L4 |
| 2015 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00692 JB | 627 [NA] | 208 [AA] | 4914-5540 | rplC | 50S ribosomal protein L3 |
| 2016 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00693 JB | 312 [NA] | 103 [AA] | 5557-5868 | rpsJ | 30S ribosomal protein S10 |
| 2017 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00694 JB | 897 [NA] | 298 [AA] | 6118-7014 | cynR | HTH-type transcriptional regulator CynR |
| 2018 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00695 JB | 483 [NA] | 160 [AA] | 7288-7770 | atoD_1 | Acetate CoA-transferase subunit alpha |
| 2019 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00696 JB | 204 [NA] | 67 [AA] | 7739-7942 | atoD_2 | Acetate CoA-transferase subunit alpha |
| 2020 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00697 JB | 495 [NA] | 164 [AA] | 7954-8448 | hypothetical protein | |
| 2021 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00698 JB | 1344 [NA] | 447 [AA] | 8623-9966 | atoE | Putative short-chain fatty acid transporter |
| 2022 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00699 JB | 1185 [NA] | 394 [AA] | 9984-11168 | atoB | Acetyl-CoA acetyltransferase |
| 2023 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00700 JB | 468 [NA] | 155 [AA] | 11266-11733 | lrp | Leucine-responsive regulatory protein |
| 2024 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00701 JB | 438 [NA] | 145 [AA] | 11824-12261 | hypothetical protein | |
| 2025 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00702 JB | 1059 [NA] | 352 [AA] | 12298-13356 | hypothetical protein | |
| 2026 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00703 JB | 933 [NA] | 310 [AA] | 13473-14405 | arcC1 | Carbamate kinase 1 |
| 2027 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00704 JB | 1005 [NA] | 334 [AA] | 14415-15419 | arcB_1 | Ornithine carbamoyltransferase%2C catabolic |
| 2028 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00705 JB | 1392 [NA] | 463 [AA] | 15662-17053 | clcA | H(+)Cl(-) exchange transporter ClcA |
| 2029 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00706 JB | 984 [NA] | 327 [AA] | 17056-18039 | dusA | tRNA-dihydrouridine(2020a) synthase |
| 2030 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00707 JB | 993 [NA] | 330 [AA] | 18095-19087 | asnA | Aspartate--ammonia ligase |
| 2031 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00708 JB | 453 [NA] | 150 [AA] | 19253-19705 | asnC | Regulatory protein AsnC |
| 2032 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00709 JB | 759 [NA] | 252 [AA] | 19740-20498 | udp | Uridine phosphorylase |
| 2033 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00710 JB | 1062 [NA] | 353 [AA] | 20635-21696 | hypothetical protein | |
| 2034 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00711 JB | 351 [NA] | 116 [AA] | 21770-22120 | yfgD | putative protein YfgD |
| 2035 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00712 JB | 297 [NA] | 98 [AA] | 22224-22520 | hypothetical protein | |
| 2036 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00713 JB | 285 [NA] | 94 [AA] | 22537-22821 | hypothetical protein | |
| 2037 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00714 JB | 1332 [NA] | 443 [AA] | 23032-24363 | rimO | Ribosomal protein S12 methylthiotransferase RimO |
| 2038 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00715 JB | 474 [NA] | 157 [AA] | 24419-24892 | yfkJ | Low molecular weight protein-tyrosine-phosphatase YfkJ |
| 2039 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00716 JB | 219 [NA] | 72 [AA] | 25019-25237 | hypothetical protein | |
| 2040 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00717 JB | 597 [NA] | 198 [AA] | 25309-25905 | slyD | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD |
| 2041 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00718 JB | 720 [NA] | 239 [AA] | 26000-26719 | hypothetical protein | |
| 2042 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00719 JB | 360 [NA] | 119 [AA] | 26770-27129 | rraB_1 | Regulator of ribonuclease activity B |
| 2043 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00720 JB | 96 [NA] | 31 [AA] | 27110-27205 | rraB_2 | Regulator of ribonuclease activity B |
| 2044 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00721 JB | 396 [NA] | 131 [AA] | 27300-27695 | mscL | Large-conductance mechanosensitive channel |
| 2045 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00722 JB | 1377 [NA] | 458 [AA] | 27805-29181 | trkA | Trk system potassium uptake protein TrkA |
| 2046 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00723 JB | 1356 [NA] | 451 [AA] | 29205-30560 | rsmB | Ribosomal RNA small subunit methyltransferase B |
| 2047 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00724 JB | 960 [NA] | 319 [AA] | 30560-31519 | fmt | Methionyl-tRNA formyltransferase |
| 2048 | SEQF3484.1_NHNH01000014.1 | SEQF3484.1_00725 JB | 513 [NA] | 170 [AA] | 31582-32094 | def | Peptide deformylase |
| 2049 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00727 JB | 513 [NA] | 170 [AA] | 460-972 | hemG | Protoporphyrinogen IX dehydrogenase [menaquinone] |
| 2050 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00728 JB | 1464 [NA] | 487 [AA] | 972-2435 | trkH | Trk system potassium uptake protein TrkH |
| 2051 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00729 JB | 273 [NA] | 90 [AA] | 2701-2973 | yigZ | IMPACT family member YigZ |
| 2052 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00730 JB | 246 [NA] | 81 [AA] | 3061-3306 | tusA | Sulfur carrier protein TusA |
| 2053 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00731 JB | 1272 [NA] | 423 [AA] | 3626-4897 | nadR | Bifunctional NAD biosynthesis protein NadR |
| 2054 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00732 JB | 684 [NA] | 227 [AA] | 4913-5596 | hypothetical protein | |
| 2055 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00733 JB | 1230 [NA] | 409 [AA] | 5726-6955 | tyrP_2 | Tyrosine-specific transport protein |
| 2056 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00734 JB | 138 [NA] | 45 [AA] | 7711-7848 | hypothetical protein | |
| 2057 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00735 JB | 390 [NA] | 129 [AA] | 7976-8365 | rplQ | 50S ribosomal protein L17 |
| 2058 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00736 JB | 990 [NA] | 329 [AA] | 8407-9396 | rpoA | DNA-directed RNA polymerase subunit alpha |
| 2059 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00737 JB | 621 [NA] | 206 [AA] | 9425-10045 | rpsD | 30S ribosomal protein S4 |
| 2060 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00738 JB | 390 [NA] | 129 [AA] | 10075-10464 | rpsK | 30S ribosomal protein S11 |
| 2061 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00739 JB | 357 [NA] | 118 [AA] | 10480-10836 | rpsM | 30S ribosomal protein S13 |
| 2062 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00741 JB | 114 [NA] | 37 [AA] | 10978-11091 | rpmJ | 50S ribosomal protein L36 |
| 2063 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00742 JB | 747 [NA] | 248 [AA] | 11117-11863 | secY_1 | Protein translocase subunit SecY |
| 2064 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00743 JB | 618 [NA] | 205 [AA] | 11826-12443 | secY_2 | Protein translocase subunit SecY |
| 2065 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00744 JB | 435 [NA] | 144 [AA] | 12447-12881 | rplO | 50S ribosomal protein L15 |
| 2066 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00745 JB | 180 [NA] | 59 [AA] | 12885-13064 | rpmD | 50S ribosomal protein L30 |
| 2067 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00746 JB | 501 [NA] | 166 [AA] | 13071-13571 | rpsE | 30S ribosomal protein S5 |
| 2068 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00747 JB | 354 [NA] | 117 [AA] | 13587-13940 | rplR | 50S ribosomal protein L18 |
| 2069 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00748 JB | 534 [NA] | 177 [AA] | 13954-14487 | rplF | 50S ribosomal protein L6 |
| 2070 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00749 JB | 393 [NA] | 130 [AA] | 14503-14895 | rpsH | 30S ribosomal protein S8 |
| 2071 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00750 JB | 306 [NA] | 101 [AA] | 14932-15237 | rpsN | 30S ribosomal protein S14 |
| 2072 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00751 JB | 540 [NA] | 179 [AA] | 15250-15789 | rplE | 50S ribosomal protein L5 |
| 2073 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00752 JB | 312 [NA] | 103 [AA] | 15807-16118 | rplX | 50S ribosomal protein L24 |
| 2074 | SEQF3484.1_NHNH01000015.1 | SEQF3484.1_00753 JB | 372 [NA] | 123 [AA] | 16129-16500 | rplN | 50S ribosomal protein L14 |
| 2075 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00754 JB | 240 [NA] | 79 [AA] | 28-267 | insK_3 | Putative transposase InsK for insertion sequence element IS150 |
| 2076 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00756 JB | 486 [NA] | 161 [AA] | 1191-1676 | ftnA_1 | putative bacterial non-heme ferritin |
| 2077 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00757 JB | 498 [NA] | 165 [AA] | 1692-2189 | ftnA_2 | putative bacterial non-heme ferritin |
| 2078 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00758 JB | 171 [NA] | 56 [AA] | 2251-2421 | hypothetical protein | |
| 2079 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00759 JB | 774 [NA] | 257 [AA] | 2530-3303 | fnr | Anaerobic regulatory protein |
| 2080 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00760 JB | 933 [NA] | 310 [AA] | 3422-4354 | uspE | Universal stress protein E |
| 2081 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00761 JB | 837 [NA] | 278 [AA] | 4481-5317 | putative protein | |
| 2082 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00762 JB | 831 [NA] | 276 [AA] | 5402-6232 | topA_2 | DNA topoisomerase 1 |
| 2083 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00763 JB | 1752 [NA] | 583 [AA] | 6260-8011 | topA_3 | DNA topoisomerase 1 |
| 2084 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00764 JB | 837 [NA] | 278 [AA] | 8249-9085 | yciV | 5-3 exoribonuclease |
| 2085 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00765 JB | 1020 [NA] | 339 [AA] | 9099-10118 | pyrD | Dihydroorotate dehydrogenase (quinone) |
| 2086 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00766 JB | 180 [NA] | 59 [AA] | 10191-10370 | pepN_1 | Aminopeptidase N |
| 2087 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00767 JB | 1164 [NA] | 387 [AA] | 10363-11526 | pepN_2 | Aminopeptidase N |
| 2088 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00768 JB | 1239 [NA] | 412 [AA] | 11564-12802 | pepN_3 | Aminopeptidase N |
| 2089 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00769 JB | 1191 [NA] | 396 [AA] | 13224-14414 | aspC | Aspartate aminotransferase |
| 2090 | SEQF3484.1_NHNH01000016.1 | SEQF3484.1_00770 JB | 564 [NA] | 187 [AA] | 14465-15028 | hypothetical protein | |
| 2091 | SEQF3484.1_NHNH01000017.1 | SEQF3484.1_00773 JB | 264 [NA] | 87 [AA] | 1103-1366 | hypothetical protein | |
| 2092 | SEQF3484.1_NHNH01000018.1 | SEQF3484.1_00775 JB | 132 [NA] | 43 [AA] | 1443-1574 | hypothetical protein | |
| 2093 | SEQF3484.1_NHNH01000018.1 | SEQF3484.1_00776 JB | 174 [NA] | 57 [AA] | 1642-1815 | hypothetical protein |