Genome Explorer: Ralstonia pickettii s13 (SEQF10204.1)
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NCBI Annotation for SEQF10204.1
| Genome selected: Ralstonia pickettii s13 | |||
| Contigs: | 39 | Bases: | 5537555 bps |
| CDS: | 185 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 47 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 5001 | RASM01000025.1 | MBB0110160.1 JB | 1173 [NA] | 390 [AA] | 22288-23460 | D7S61_26065 | efflux RND transporter periplasmic adaptor subunit |
| 5002 | RASM01000025.1 | MBB0110161.1 JB | 3237 [NA] | 1078 [AA] | 23457-26693 | D7S61_26070 | CusA/CzcA family heavy metal efflux RND transporter |
| 5003 | RASM01000025.1 | MBB0110162.1 JB | 966 [NA] | 321 [AA] | 26767-27732 | D7S61_26075 | hypothetical protein |
| 5004 | RASM01000025.1 | MBB0110163.1 JB | 1206 [NA] | 401 [AA] | 27751-28956 | D7S61_26080 | chromate transporter |
| 5005 | RASM01000025.1 | MBB0110164.1 JB | 591 [NA] | 196 [AA] | 28973-29563 | D7S61_26085 | superoxide dismutase |
| 5006 | RASM01000025.1 | MBB0110165.1 JB | 462 [NA] | 153 [AA] | 29599-30060 | D7S61_26090 | chromate resistance protein |
| 5007 | RASM01000025.1 | MBB0110166.1 JB | 615 [NA] | 204 [AA] | 30081-30695 | D7S61_26095 | hypothetical protein |
| 5008 | RASM01000025.1 | MBB0110167.1 JB | 333 [NA] | 110 [AA] | 30786-31118 | D7S61_26100 | hypothetical protein |
| 5009 | RASM01000025.1 | MBB0110168.1 JB | 306 [NA] | 101 [AA] | 31135-31440 | D7S61_26105 | hypothetical protein |
| 5010 | RASM01000025.1 | MBB0110169.1 JB | 1269 [NA] | 422 [AA] | 31433-32701 | D7S61_26110 | MFS transporter |
| 5011 | RASM01000025.1 | MBB0110170.1 JB | 936 [NA] | 311 [AA] | 32745-33680 | D7S61_26115 | DUF1259 domain-containing protein |
| 5012 | RASM01000025.1 | MBB0110171.1 JB | 1041 [NA] | 346 [AA] | 33740-34780 | D7S61_26120 | YncE family protein |
| 5013 | RASM01000025.1 | MBB0110172.1 JB | 1059 [NA] | 352 [AA] | 34835-35893 | D7S61_26125 | DMT family transporter |
| 5014 | RASM01000025.1 | MBB0110173.1 JB | 1299 [NA] | 432 [AA] | 35900-37198 | D7S61_26130 | Tn3 family resolvase |
| 5015 | RASM01000025.1 | MBB0110174.1 JB | 2928 [NA] | 975 [AA] | 37224-40151 | D7S61_26135 | Tn3 family transposase |
| 5016 | RASM01000025.1 | MBB0110175.1 JB | 1023 [NA] | 340 [AA] | 40272-41294 | D7S61_26140 | hypothetical protein |
| 5017 | RASM01000025.1 | MBB0110176.1 JB | 288 [NA] | 95 [AA] | 41291-41578 | D7S61_26145 | hypothetical protein |
| 5018 | RASM01000025.1 | MBB0110177.1 JB | 405 [NA] | 134 [AA] | 41688-42092 | D7S61_26150 | hypothetical protein |
| 5019 | RASM01000025.1 | MBB0110178.1 JB | 606 [NA] | 201 [AA] | 42168-42773 | D7S61_26155 | hypothetical protein |
| 5020 | RASM01000025.1 | MBB0110179.1 JB | 327 [NA] | 108 [AA] | 42889-43215 | D7S61_26165 | hypothetical protein |
| 5021 | RASM01000025.1 | MBB0110180.1 JB | 426 [NA] | 141 [AA] | 43212-43637 | D7S61_26170 | hypothetical protein |
| 5022 | RASM01000026.1 | MBB0110181.1 JB | 693 [NA] | 230 [AA] | <1-695 | D7S61_26175 | S-methyl-5'-thioadenosine phosphorylase |
| 5023 | RASM01000026.1 | MBB0110182.1 JB | 909 [NA] | 302 [AA] | 897-1805 | D7S61_26180 | LysR family transcriptional regulator |
| 5024 | RASM01000026.1 | MBB0110183.1 JB | 774 [NA] | 257 [AA] | 2061-2834 | D7S61_26185 | tRNA (guanosine(46)-N7)-methyltransferase TrmB |
| 5025 | RASM01000026.1 | MBB0110184.1 JB | 1113 [NA] | 370 [AA] | 2860-3972 | D7S61_26190 | NADH:flavin oxidoreductase/NADH oxidase |
| 5026 | RASM01000026.1 | MBB0110185.1 JB | 882 [NA] | 293 [AA] | 4092-4973 | D7S61_26195 | undecaprenyl-diphosphate phosphatase |
| 5027 | RASM01000026.1 | MBB0110186.1 JB | 594 [NA] | 197 [AA] | 5026-5619 | D7S61_26200 | DUF1439 domain-containing protein |
| 5028 | RASM01000026.1 | MBB0110187.1 JB | 258 [NA] | 85 [AA] | 5626-5883 | D7S61_26205 | YkgJ family cysteine cluster protein |
| 5029 | RASM01000026.1 | MBB0110188.1 JB | 744 [NA] | 247 [AA] | 6065-6808 | D7S61_26210 | TetR/AcrR family transcriptional regulator |
| 5030 | RASM01000026.1 | MBB0110189.1 JB | 711 [NA] | 236 [AA] | 6844-7554 | D7S61_26215 | protein-L-isoaspartate O-methyltransferase |
| 5031 | RASM01000026.1 | MBB0110190.1 JB | 333 [NA] | 110 [AA] | 7577-7909 | D7S61_26220 | sulfurtransferase |
| 5032 | RASM01000026.1 | MBB0110191.1 JB | 1437 [NA] | 478 [AA] | 8055-9491 | D7S61_26225 | channel protein TolC |
| 5033 | RASM01000026.1 | MBB0110192.1 JB | 681 [NA] | 226 [AA] | 9492-10172 | D7S61_26230 | META domain-containing protein |
| 5034 | RASM01000026.1 | MBB0110193.1 JB | 1317 [NA] | 438 [AA] | 10274-11590 | D7S61_26235 | 3-deoxy-D-manno-octulosonic acid transferase |
| 5035 | RASM01000026.1 | MBB0110194.1 JB | 999 [NA] | 332 [AA] | 11590-12588 | D7S61_26240 | lipopolysaccharide heptosyltransferase I |
| 5036 | RASM01000026.1 | MBB0110195.1 JB | 1389 [NA] | 462 [AA] | 12632-14020 | D7S61_26245 | phosphomannomutase/phosphoglucomutase |
| 5037 | RASM01000026.1 | MBB0110196.1 JB | 1062 [NA] | 353 [AA] | 14197-15258 | D7S61_26250 | dTDP-glucose 4,6-dehydratase |
| 5038 | RASM01000026.1 | MBB0110197.1 JB | 885 [NA] | 294 [AA] | 15274-16158 | D7S61_26255 | glucose-1-phosphate thymidylyltransferase |
| 5039 | RASM01000026.1 | MBB0110198.1 JB | 555 [NA] | 184 [AA] | 16155-16709 | D7S61_26260 | dTDP-4-dehydrorhamnose 3,5-epimerase |
| 5040 | RASM01000026.1 | MBB0110199.1 JB | 939 [NA] | 312 [AA] | 16706-17644 | D7S61_26265 | dTDP-4-dehydrorhamnose reductase |
| 5041 | RASM01000026.1 | MBB0110200.1 JB | 1140 [NA] | 379 [AA] | 18593-19732 | D7S61_26275 | DegT/DnrJ/EryC1/StrS family aminotransferase |
| 5042 | RASM01000026.1 | MBB0110201.1 JB | 1452 [NA] | 483 [AA] | 19738-21189 | D7S61_26280 | hypothetical protein |
| 5043 | RASM01000026.1 | MBB0110202.1 JB | 945 [NA] | 314 [AA] | 21234-22178 | D7S61_26285 | glycosyltransferase |
| 5044 | RASM01000026.1 | MBB0110203.1 JB | 1260 [NA] | 419 [AA] | 22185-23444 | D7S61_26290 | hypothetical protein |
| 5045 | RASM01000026.1 | MBB0110204.1 JB | 1140 [NA] | 379 [AA] | 23475-24614 | D7S61_26295 | NAD-dependent epimerase/dehydratase family protein |
| 5046 | RASM01000026.1 | MBB0110205.1 JB | 549 [NA] | 182 [AA] | 24618-25166 | D7S61_26300 | serine acetyltransferase |
| 5047 | RASM01000026.1 | MBB0110206.1 JB | 1068 [NA] | 355 [AA] | 25163-26230 | D7S61_26305 | hypothetical protein |
| 5048 | RASM01000026.1 | MBB0110207.1 JB | 1104 [NA] | 367 [AA] | 26224-27327 | D7S61_26310 | glycosyl transferase |
| 5049 | RASM01000026.1 | MBB0110208.1 JB | 876 [NA] | 291 [AA] | 27320-28195 | D7S61_26315 | chain-length determining protein |
| 5050 | RASM01000026.1 | MBB0110209.1 JB | 834 [NA] | 277 [AA] | 28209-29042 | D7S61_26320 | symmetrical bis(5'-nucleosyl)-tetraphosphatase |
| 5051 | RASM01000026.1 | MBB0110210.1 JB | 381 [NA] | 126 [AA] | 29169-29549 | D7S61_26325 | hypothetical protein |
| 5052 | RASM01000027.1 | MBB0110211.1 JB | 279 [NA] | 92 [AA] | 1221-1499 | D7S61_26335 | hypothetical protein |
| 5053 | RASM01000027.1 | MBB0110212.1 JB | 396 [NA] | 131 [AA] | 1798-2193 | D7S61_26340 | heavy metal resistance protein CzcE |
| 5054 | RASM01000027.1 | MBB0110213.1 JB | 1464 [NA] | 487 [AA] | 2308-3771 | D7S61_26345 | sensor histidine kinase |
| 5055 | RASM01000027.1 | MBB0110214.1 JB | 678 [NA] | 225 [AA] | 3743-4420 | D7S61_26350 | DNA-binding response regulator |
| 5056 | RASM01000027.1 | MBB0110215.1 JB | 951 [NA] | 316 [AA] | 4422-5372 | D7S61_26355 | cation transporter |
| 5057 | RASM01000027.1 | MBB0110216.1 JB | 3192 [NA] | 1063 [AA] | 5423-8614 | D7S61_26360 | efflux RND transporter permease subunit |
| 5058 | RASM01000027.1 | MBB0110217.1 JB | 1563 [NA] | 520 [AA] | 8631-10193 | D7S61_26365 | efflux RND transporter periplasmic adaptor subunit |
| 5059 | RASM01000027.1 | MBB0110218.1 JB | 1257 [NA] | 418 [AA] | 10211-11467 | D7S61_26370 | TolC family protein |
| 5060 | RASM01000027.1 | MBB0110219.1 JB | 324 [NA] | 107 [AA] | 11609-11932 | D7S61_26375 | hypothetical protein |
| 5061 | RASM01000027.1 | MBB0110220.1 JB | 180 [NA] | 59 [AA] | 11996-12175 | D7S61_26380 | hypothetical protein |
| 5062 | RASM01000027.1 | MBB0110221.1 JB | 855 [NA] | 284 [AA] | 12205-13059 | D7S61_26385 | isoprenylcysteine carboxylmethyltransferase family protein |
| 5063 | RASM01000027.1 | MBB0110222.1 JB | 459 [NA] | 152 [AA] | 13105-13563 | D7S61_26390 | MgtC/SapB family protein |
| 5064 | RASM01000027.1 | MBB0110223.1 JB | 408 [NA] | 135 [AA] | 13671-14078 | D7S61_26395 | hypothetical protein |
| 5065 | RASM01000027.1 | MBB0110224.1 JB | 939 [NA] | 312 [AA] | 14941-15879 | D7S61_26405 | transcriptional regulator |
| 5066 | RASM01000027.1 | MBB0110225.1 JB | 1506 [NA] | 501 [AA] | 15876-17381 | D7S61_26410 | integrase |
| 5067 | RASM01000027.1 | MBB0110226.1 JB | 255 [NA] | 84 [AA] | 17312-17566 | D7S61_26415 | DoxX family membrane protein |
| 5068 | RASM01000027.1 | MBB0110227.1 JB | 1686 [NA] | 561 [AA] | 17595-19280 | D7S61_26420 | mercury(II) reductase |
| 5069 | RASM01000027.1 | MBB0110228.1 JB | 420 [NA] | 139 [AA] | 19321-19740 | D7S61_26425 | mercury transporter MerC |
| 5070 | RASM01000027.1 | MBB0110229.1 JB | 273 [NA] | 90 [AA] | 19769-20041 | D7S61_26430 | mercury resistance system periplasmic binding protein MerP |
| 5071 | RASM01000027.1 | MBB0110230.1 JB | 351 [NA] | 116 [AA] | 20055-20405 | D7S61_26435 | mercuric ion transporter MerT |
| 5072 | RASM01000027.1 | MBB0110231.1 JB | 408 [NA] | 135 [AA] | 20477-20884 | D7S61_26440 | Hg(II)-responsive transcriptional regulator |
| 5073 | RASM01000027.1 | MBB0110232.1 JB | 2679 [NA] | 892 [AA] | 23232-25910 | D7S61_26450 | DNA polymerase III subunit epsilon |
| 5074 | RASM01000027.1 | MBB0110233.1 JB | 996 [NA] | 331 [AA] | 25932-26927 | D7S61_26455 | SDR family NAD(P)-dependent oxidoreductase |
| 5075 | RASM01000027.1 | MBB0110234.1 JB | 1815 [NA] | 604 [AA] | 26928-28742 | D7S61_26460 | glycoside hydrolase family 15 protein |
| 5076 | RASM01000027.1 | MBB0110235.1 JB | 276 [NA] | 91 [AA] | 28940-29215 | D7S61_26465 | four-helix bundle copper-binding protein |
| 5077 | RASM01000028.1 | MBB0110236.1 JB | 327 [NA] | 108 [AA] | 104-430 | D7S61_26470 | single-strand-binding protein/primosomal replication protein n |
| 5078 | RASM01000028.1 | MBB0110237.1 JB | 282 [NA] | 93 [AA] | 645-926 | D7S61_26475 | hypothetical protein |
| 5079 | RASM01000028.1 | MBB0110238.1 JB | 630 [NA] | 209 [AA] | 923-1552 | D7S61_26480 | hypothetical protein |
| 5080 | RASM01000028.1 | MBB0110239.1 JB | 3072 [NA] | 1023 [AA] | 1790-4861 | D7S61_26485 | type I restriction endonuclease subunit R |
| 5081 | RASM01000028.1 | MBB0110240.1 JB | 1422 [NA] | 473 [AA] | 4848-6269 | D7S61_26490 | restriction endonuclease subunit S |
| 5082 | RASM01000028.1 | MBB0110241.1 JB | 2385 [NA] | 794 [AA] | 6266-8650 | D7S61_26495 | SAM-dependent DNA methyltransferase |
| 5083 | RASM01000028.1 | MBB0110242.1 JB | 1731 [NA] | 576 [AA] | 8662-10392 | D7S61_26500 | DUF262 domain-containing protein |
| 5084 | RASM01000028.1 | MBB0110243.1 JB | 900 [NA] | 299 [AA] | 10408-11307 | D7S61_26505 | WYL domain-containing protein |
| 5085 | RASM01000028.1 | MBB0110244.1 JB | 2205 [NA] | 734 [AA] | 11533-13737 | D7S61_26510 | ankyrin repeat domain-containing protein |
| 5086 | RASM01000028.1 | MBB0110245.1 JB | 204 [NA] | 67 [AA] | 13734-13937 | D7S61_26515 | hypothetical protein |
| 5087 | RASM01000028.1 | MBB0110246.1 JB | 1647 [NA] | 548 [AA] | 14627-16273 | D7S61_26520 | hypothetical protein |
| 5088 | RASM01000029.1 | MBB0110247.1 JB | 690 [NA] | 229 [AA] | 79-768 | D7S61_26530 | SDR family oxidoreductase |
| 5089 | RASM01000029.1 | MBB0110248.1 JB | 579 [NA] | 192 [AA] | 1305-1883 | D7S61_26540 | hypothetical protein |
| 5090 | RASM01000029.1 | MBB0110249.1 JB | 522 [NA] | 173 [AA] | 2140-2661 | D7S61_26545 | lysis protein |
| 5091 | RASM01000029.1 | MBB0110250.1 JB | 234 [NA] | 77 [AA] | 3858-4091 | D7S61_26555 | hypothetical protein |
| 5092 | RASM01000029.1 | MBB0110251.1 JB | 351 [NA] | 116 [AA] | 4258-4608 | D7S61_26560 | hypothetical protein |
| 5093 | RASM01000029.1 | MBB0110252.1 JB | 1110 [NA] | 369 [AA] | 4703-5812 | D7S61_26565 | enoyl-CoA hydratase/isomerase family protein |
| 5094 | RASM01000029.1 | MBB0110253.1 JB | 906 [NA] | 301 [AA] | 5960-6865 | D7S61_26570 | sterol desaturase family protein |
| 5095 | RASM01000029.1 | MBB0110254.1 JB | 870 [NA] | 289 [AA] | 6858-7727 | D7S61_26575 | transcriptional regulator LrhA |
| 5096 | RASM01000029.1 | MBB0110255.1 JB | 1590 [NA] | 529 [AA] | 7984-9573 | D7S61_26580 | sulfurtransferase |
| 5097 | RASM01000029.1 | MBB0110256.1 JB | 1821 [NA] | 606 [AA] | 9888-11708 | D7S61_26590 | translational GTPase TypA |
| 5098 | RASM01000029.1 | MBB0110257.1 JB | 450 [NA] | 149 [AA] | 12028-12477 | D7S61_26595 | MarR family transcriptional regulator |
| 5099 | RASM01000029.1 | MBB0110258.1 JB | 1530 [NA] | 509 [AA] | 12559-14088 | D7S61_26600 | efflux transporter outer membrane subunit |
| 5100 | RASM01000029.1 | MBB0110259.1 JB | 1290 [NA] | 429 [AA] | 14145-15434 | D7S61_26605 | HlyD family efflux transporter periplasmic adaptor subunit |
| 5101 | RASM01000029.1 | MBB0110260.1 JB | 1557 [NA] | 518 [AA] | 15438-16994 | D7S61_26610 | DHA2 family efflux MFS transporter permease subunit |
| 5102 | RASM01000030.1 | MBB0110261.1 JB | 948 [NA] | 315 [AA] | 1037-1984 | D7S61_26620 | LysR family transcriptional regulator |
| 5103 | RASM01000030.1 | MBB0110262.1 JB | 2100 [NA] | 699 [AA] | 2595-4694 | D7S61_26625 | hypothetical protein |
| 5104 | RASM01000030.1 | MBB0110263.1 JB | 1410 [NA] | 469 [AA] | 5007-6416 | D7S61_26630 | hypothetical protein |
| 5105 | RASM01000030.1 | MBB0110264.1 JB | 759 [NA] | 252 [AA] | 9639-10397 | D7S61_26655 | phage Gp37/Gp68 family protein |
| 5106 | RASM01000030.1 | MBB0110265.1 JB | 1263 [NA] | 420 [AA] | 10477-11739 | D7S61_26660 | three-Cys-motif partner protein TcmP |
| 5107 | RASM01000030.1 | MBB0110266.1 JB | 192 [NA] | 63 [AA] | 11778-11969 | D7S61_26665 | hypothetical protein |
| 5108 | RASM01000030.1 | MBB0110267.1 JB | 417 [NA] | 138 [AA] | 13904-14320 | D7S61_26675 | DUF2946 domain-containing protein |
| 5109 | RASM01000030.1 | MBB0110268.1 JB | 1062 [NA] | 353 [AA] | 14459-15520 | D7S61_26680 | transporter |
| 5110 | RASM01000030.1 | MBB0110269.1 JB | 558 [NA] | 185 [AA] | 15510-16067 | D7S61_26685 | TlpA family protein disulfide reductase |
| 5111 | RASM01000031.1 | MBB0110270.1 JB | 324 [NA] | 107 [AA] | 711-1034 | D7S61_26695 | hypothetical protein |
| 5112 | RASM01000031.1 | MBB0110271.1 JB | 249 [NA] | 82 [AA] | 1181-1429 | D7S61_26700 | DUF3562 domain-containing protein |
| 5113 | RASM01000031.1 | MBB0110272.1 JB | 336 [NA] | 111 [AA] | 1950-2285 | D7S61_26705 | hypothetical protein |
| 5114 | RASM01000031.1 | MBB0110273.1 JB | 1761 [NA] | 586 [AA] | 2826-4586 | D7S61_26710 | GGDEF domain-containing protein |
| 5115 | RASM01000031.1 | MBB0110274.1 JB | 1092 [NA] | 363 [AA] | 6226-7317 | D7S61_26720 | PepSY domain-containing protein |
| 5116 | RASM01000033.1 | MBB0110275.1 JB | 378 [NA] | 125 [AA] | <1-378 | D7S61_26755 | succinate dehydrogenase, cytochrome b556 subunit |
| 5117 | RASM01000033.1 | MBB0110276.1 JB | 366 [NA] | 121 [AA] | 389-754 | D7S61_26760 | succinate dehydrogenase, hydrophobic membrane anchor protein |
| 5118 | RASM01000033.1 | MBB0110277.1 JB | 1779 [NA] | 592 [AA] | 758-2536 | D7S61_26765 | succinate dehydrogenase flavoprotein subunit |
| 5119 | RASM01000033.1 | MBB0110278.1 JB | 581 [NA] | 193 [AA] | 2559->3139 | D7S61_26770 | succinate dehydrogenase iron-sulfur subunit |
| 5120 | RASM01000034.1 | MBB0110279.1 JB | 423 [NA] | 140 [AA] | 483-905 | D7S61_26780 | flagellar basal body rod protein FlgB |
| 5121 | RASM01000035.1 | MBB0110280.1 JB | 372 [NA] | 123 [AA] | 79-450 | D7S61_26790 | transposase |
| 5122 | RASM01000035.1 | MBB0110281.1 JB | 1530 [NA] | 509 [AA] | 845-2374 | D7S61_26800 | IS66 family transposase |
| 5123 | RASM01000036.1 | MBB0110282.1 JB | 210 [NA] | 69 [AA] | <1-210 | D7S61_26805 | DUF1566 domain-containing protein |
| 5124 | RASM01000036.1 | MBB0110283.1 JB | 453 [NA] | 150 [AA] | 241-693 | D7S61_26810 | DUF1566 domain-containing protein |
| 5125 | RASM01000036.1 | MBB0110284.1 JB | 456 [NA] | 151 [AA] | 724-1179 | D7S61_26815 | DUF1566 domain-containing protein |
| 5126 | RASM01000036.1 | MBB0110285.1 JB | 173 [NA] | 57 [AA] | 1199->1371 | D7S61_26820 | four helix bundle protein |
| 5127 | RASM01000038.1 | MBB0110286.1 JB | 1122 [NA] | 373 [AA] | 17-1137 | D7S61_26830 | IS3 family transposase |
| 5128 | RASM01000039.1 | MBB0110287.1 JB | 1089 [NA] | 362 [AA] | 67-1154 | D7S61_26835 | IS3 family transposase |