Genome Explorer: Oryzomicrobium terrae TPP412 (SEQF9565.1)
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PROKKA Annotation for SEQF9565.1
| Genome selected: Oryzomicrobium terrae TPP412 | |||
| Contigs: | 1 | Bases: | 3526415 bps |
| CDS: | 3115 | rRNA: | 9 |
| tmRNA: | 1 | tRNA: | 59 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 3001 | SEQF9565.1_CP022579.1 | SEQF9565.1_03082 | open | 1440 [NA] | 479 [AA] | 3395841-3397280 | hypothetical protein | |
| 3002 | SEQF9565.1_CP022579.1 | SEQF9565.1_03083 | open | 519 [NA] | 172 [AA] | 3397255-3397773 | aer_4 | Aerotaxis receptor |
| 3003 | SEQF9565.1_CP022579.1 | SEQF9565.1_03084 | open | 1017 [NA] | 338 [AA] | 3397929-3398945 | hypothetical protein | |
| 3004 | SEQF9565.1_CP022579.1 | SEQF9565.1_03085 | open | 531 [NA] | 176 [AA] | 3399073-3399603 | hypothetical protein | |
| 3005 | SEQF9565.1_CP022579.1 | SEQF9565.1_03086 | open | 228 [NA] | 75 [AA] | 3399635-3399862 | hypothetical protein | |
| 3006 | SEQF9565.1_CP022579.1 | SEQF9565.1_03087 | open | 1671 [NA] | 556 [AA] | 3399878-3401548 | mhpA | 3-(3-hydroxy-phenyl)propionate3-hydroxycinnamic acid hydroxylase |
| 3007 | SEQF9565.1_CP022579.1 | SEQF9565.1_03088 | open | 966 [NA] | 321 [AA] | 3401645-3402610 | hypothetical protein | |
| 3008 | SEQF9565.1_CP022579.1 | SEQF9565.1_03089 | open | 1326 [NA] | 441 [AA] | 3402630-3403955 | btuD_4 | Vitamin B12 import ATP-binding protein BtuD |
| 3009 | SEQF9565.1_CP022579.1 | SEQF9565.1_03090 | open | 762 [NA] | 253 [AA] | 3403974-3404735 | metN2 | Methionine import ATP-binding protein MetN 2 |
| 3010 | SEQF9565.1_CP022579.1 | SEQF9565.1_03091 | open | 933 [NA] | 310 [AA] | 3404735-3405667 | hypothetical protein | |
| 3011 | SEQF9565.1_CP022579.1 | SEQF9565.1_03092 | open | 876 [NA] | 291 [AA] | 3405670-3406545 | livH_5 | High-affinity branched-chain amino acid transport system permease protein LivH |
| 3012 | SEQF9565.1_CP022579.1 | SEQF9565.1_03093 | open | 804 [NA] | 267 [AA] | 3406772-3407575 | gylR | Glycerol operon regulatory protein |
| 3013 | SEQF9565.1_CP022579.1 | SEQF9565.1_03094 | open | 624 [NA] | 207 [AA] | 3407653-3408276 | yrdA_3 | Protein YrdA |
| 3014 | SEQF9565.1_CP022579.1 | SEQF9565.1_03095 | open | 957 [NA] | 318 [AA] | 3408304-3409260 | paaX | Transcriptional repressor PaaX |
| 3015 | SEQF9565.1_CP022579.1 | SEQF9565.1_03096 | open | 1050 [NA] | 349 [AA] | 3409346-3410395 | gcoB | Aromatic O-demethylase%2C reductase subunit |
| 3016 | SEQF9565.1_CP022579.1 | SEQF9565.1_03097 | open | 1029 [NA] | 342 [AA] | 3410499-3411527 | hypothetical protein | |
| 3017 | SEQF9565.1_CP022579.1 | SEQF9565.1_03098 | open | 1662 [NA] | 553 [AA] | 3411935-3413596 | astD | N-succinylglutamate 5-semialdehyde dehydrogenase |
| 3018 | SEQF9565.1_CP022579.1 | SEQF9565.1_03099 | open | 792 [NA] | 263 [AA] | 3413607-3414398 | paaG | 1%2C2-epoxyphenylacetyl-CoA isomerase |
| 3019 | SEQF9565.1_CP022579.1 | SEQF9565.1_03100 | open | 1545 [NA] | 514 [AA] | 3414395-3415939 | paaH | 3-hydroxyadipyl-CoA dehydrogenase |
| 3020 | SEQF9565.1_CP022579.1 | SEQF9565.1_03101 | open | 495 [NA] | 164 [AA] | 3415939-3416433 | hypothetical protein | |
| 3021 | SEQF9565.1_CP022579.1 | SEQF9565.1_03102 | open | 1326 [NA] | 441 [AA] | 3416472-3417797 | paaK | Phenylacetate-coenzyme A ligase |
| 3022 | SEQF9565.1_CP022579.1 | SEQF9565.1_03103 | open | 1218 [NA] | 405 [AA] | 3417801-3419018 | pcaF_4 | Beta-ketoadipyl-CoA thiolase |
| 3023 | SEQF9565.1_CP022579.1 | SEQF9565.1_03104 | open | 1149 [NA] | 382 [AA] | 3419087-3420235 | braC_3 | Leucine-%2C isoleucine-%2C valine-%2C threonine-%2C and alanine-binding protein |
| 3024 | SEQF9565.1_CP022579.1 | SEQF9565.1_03105 | open | 813 [NA] | 270 [AA] | 3420299-3421111 | dpgD_3 | Enoyl-CoA-hydratase |
| 3025 | SEQF9565.1_CP022579.1 | SEQF9565.1_03106 | open | 2574 [NA] | 857 [AA] | 3421179-3423752 | cphA_1 | Cyanophycin synthetase |
| 3026 | SEQF9565.1_CP022579.1 | SEQF9565.1_03107 | open | 2190 [NA] | 729 [AA] | 3423856-3426045 | cphA_2 | Cyanophycin synthetase |
| 3027 | SEQF9565.1_CP022579.1 | SEQF9565.1_03108 | open | 2319 [NA] | 772 [AA] | 3426428-3428746 | btuD_5 | Vitamin B12 import ATP-binding protein BtuD |
| 3028 | SEQF9565.1_CP022579.1 | SEQF9565.1_03109 | open | 480 [NA] | 159 [AA] | 3428767-3429246 | hypothetical protein | |
| 3029 | SEQF9565.1_CP022579.1 | SEQF9565.1_03110 | open | 657 [NA] | 218 [AA] | 3429264-3429920 | Putative phosphoribosyl transferase | |
| 3030 | SEQF9565.1_CP022579.1 | SEQF9565.1_03111 | open | 570 [NA] | 189 [AA] | 3429983-3430552 | pyrR_2 | Bifunctional protein PyrR |
| 3031 | SEQF9565.1_CP022579.1 | SEQF9565.1_03112 | open | 507 [NA] | 168 [AA] | 3430771-3431277 | hypothetical protein | |
| 3032 | SEQF9565.1_CP022579.1 | SEQF9565.1_03113 | open | 189 [NA] | 62 [AA] | 3431288-3431476 | hypothetical protein | |
| 3033 | SEQF9565.1_CP022579.1 | SEQF9565.1_03114 | open | 633 [NA] | 210 [AA] | 3431487-3432119 | pncA | Nicotinamidase |
| 3034 | SEQF9565.1_CP022579.1 | SEQF9565.1_03115 | open | 1350 [NA] | 449 [AA] | 3432116-3433465 | pncB2 | Nicotinate phosphoribosyltransferase pncB2 |
| 3035 | SEQF9565.1_CP022579.1 | SEQF9565.1_03116 | open | 474 [NA] | 157 [AA] | 3433494-3433967 | hypothetical protein | |
| 3036 | SEQF9565.1_CP022579.1 | SEQF9565.1_03117 | open | 201 [NA] | 66 [AA] | 3434086-3434286 | hypothetical protein | |
| 3037 | SEQF9565.1_CP022579.1 | SEQF9565.1_03118 | open | 717 [NA] | 238 [AA] | 3434341-3435057 | hypothetical protein | |
| 3038 | SEQF9565.1_CP022579.1 | SEQF9565.1_03119 | open | 1206 [NA] | 401 [AA] | 3435138-3436343 | hypothetical protein | |
| 3039 | SEQF9565.1_CP022579.1 | SEQF9565.1_03120 | open | 879 [NA] | 292 [AA] | 3436390-3437268 | hdfR_3 | HTH-type transcriptional regulator HdfR |
| 3040 | SEQF9565.1_CP022579.1 | SEQF9565.1_03121 | open | 588 [NA] | 195 [AA] | 3437379-3437966 | hypothetical protein | |
| 3041 | SEQF9565.1_CP022579.1 | SEQF9565.1_03122 | open | 1695 [NA] | 564 [AA] | 3437975-3439669 | glpE_4 | Thiosulfate sulfurtransferase GlpE |
| 3042 | SEQF9565.1_CP022579.1 | SEQF9565.1_03123 | open | 90 [NA] | 29 [AA] | 3440159-3440248 | hypothetical protein | |
| 3043 | SEQF9565.1_CP022579.1 | SEQF9565.1_03124 | open | 690 [NA] | 229 [AA] | 3440490-3441179 | hypothetical protein | |
| 3044 | SEQF9565.1_CP022579.1 | SEQF9565.1_03125 | open | 3339 [NA] | 1112 [AA] | 3441183-3444521 | hypothetical protein | |
| 3045 | SEQF9565.1_CP022579.1 | SEQF9565.1_03126 | open | 213 [NA] | 70 [AA] | 3444643-3444855 | hypothetical protein | |
| 3046 | SEQF9565.1_CP022579.1 | SEQF9565.1_03127 | open | 2919 [NA] | 972 [AA] | 3444852-3447770 | rep_2 | ATP-dependent DNA helicase Rep |
| 3047 | SEQF9565.1_CP022579.1 | SEQF9565.1_03128 | open | 1947 [NA] | 648 [AA] | 3447767-3449713 | hypothetical protein | |
| 3048 | SEQF9565.1_CP022579.1 | SEQF9565.1_03129 | open | 2685 [NA] | 894 [AA] | 3449703-3452387 | hypothetical protein | |
| 3049 | SEQF9565.1_CP022579.1 | SEQF9565.1_03130 | open | 4716 [NA] | 1571 [AA] | 3453072-3457787 | hypothetical protein | |
| 3050 | SEQF9565.1_CP022579.1 | SEQF9565.1_03131 | open | 891 [NA] | 296 [AA] | 3457801-3458691 | hypothetical protein | |
| 3051 | SEQF9565.1_CP022579.1 | SEQF9565.1_03132 | open | 861 [NA] | 286 [AA] | 3459097-3459957 | hypothetical protein | |
| 3052 | SEQF9565.1_CP022579.1 | SEQF9565.1_03133 | open | 735 [NA] | 244 [AA] | 3459973-3460707 | hypothetical protein | |
| 3053 | SEQF9565.1_CP022579.1 | SEQF9565.1_03134 | open | 687 [NA] | 228 [AA] | 3461129-3461815 | hypothetical protein | |
| 3054 | SEQF9565.1_CP022579.1 | SEQF9565.1_03135 | open | 1233 [NA] | 410 [AA] | 3461808-3463040 | intQ | Putative defective protein IntQ |
| 3055 | SEQF9565.1_CP022579.1 | SEQF9565.1_03136 | open | 237 [NA] | 78 [AA] | 3463033-3463269 | hypothetical protein | |
| 3056 | SEQF9565.1_CP022579.1 | SEQF9565.1_03137 | open | 255 [NA] | 84 [AA] | 3463391-3463645 | hypothetical protein | |
| 3057 | SEQF9565.1_CP022579.1 | SEQF9565.1_03139 | open | 438 [NA] | 145 [AA] | 3463977-3464414 | petJ | Cytochrome c6 |
| 3058 | SEQF9565.1_CP022579.1 | SEQF9565.1_03140 | open | 276 [NA] | 91 [AA] | 3464495-3464770 | hypothetical protein | |
| 3059 | SEQF9565.1_CP022579.1 | SEQF9565.1_03141 | open | 255 [NA] | 84 [AA] | 3464898-3465152 | hypothetical protein | |
| 3060 | SEQF9565.1_CP022579.1 | SEQF9565.1_03142 | open | 2016 [NA] | 671 [AA] | 3465319-3467334 | rep_3 | ATP-dependent DNA helicase Rep |
| 3061 | SEQF9565.1_CP022579.1 | SEQF9565.1_03143 | open | 1026 [NA] | 341 [AA] | 3467489-3468514 | recA | Protein RecA |
| 3062 | SEQF9565.1_CP022579.1 | SEQF9565.1_03145 | open | 777 [NA] | 258 [AA] | 3468989-3469765 | lptB_5 | Lipopolysaccharide export system ATP-binding protein LptB |
| 3063 | SEQF9565.1_CP022579.1 | SEQF9565.1_03146 | open | 1497 [NA] | 498 [AA] | 3469845-3471341 | rpoN | RNA polymerase sigma-54 factor |
| 3064 | SEQF9565.1_CP022579.1 | SEQF9565.1_03147 | open | 321 [NA] | 106 [AA] | 3471354-3471674 | hpf | Ribosome hibernation promoting factor |
| 3065 | SEQF9565.1_CP022579.1 | SEQF9565.1_03148 | open | 486 [NA] | 161 [AA] | 3471930-3472415 | ptsN | Nitrogen regulatory protein |
| 3066 | SEQF9565.1_CP022579.1 | SEQF9565.1_03149 | open | 936 [NA] | 311 [AA] | 3472384-3473319 | hprK | HPr kinasephosphorylase |
| 3067 | SEQF9565.1_CP022579.1 | SEQF9565.1_03150 | open | 318 [NA] | 105 [AA] | 3473358-3473675 | psiF | Phosphate starvation-inducible protein PsiF |
| 3068 | SEQF9565.1_CP022579.1 | SEQF9565.1_03151 | open | 918 [NA] | 305 [AA] | 3473756-3474673 | hypothetical protein | |
| 3069 | SEQF9565.1_CP022579.1 | SEQF9565.1_03152 | open | 1023 [NA] | 340 [AA] | 3474834-3475856 | ttcA | tRNA-cytidine(32) 2-sulfurtransferase |
| 3070 | SEQF9565.1_CP022579.1 | SEQF9565.1_03153 | open | 747 [NA] | 248 [AA] | 3475825-3476571 | fabG_4 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG |
| 3071 | SEQF9565.1_CP022579.1 | SEQF9565.1_03154 | open | 1158 [NA] | 385 [AA] | 3476736-3477893 | hypothetical protein | |
| 3072 | SEQF9565.1_CP022579.1 | SEQF9565.1_03155 | open | 330 [NA] | 109 [AA] | 3477912-3478241 | hypothetical protein | |
| 3073 | SEQF9565.1_CP022579.1 | SEQF9565.1_03156 | open | 198 [NA] | 65 [AA] | 3478346-3478543 | hypothetical protein | |
| 3074 | SEQF9565.1_CP022579.1 | SEQF9565.1_03157 | open | 807 [NA] | 268 [AA] | 3478571-3479377 | Monoacylglycerol lipase | |
| 3075 | SEQF9565.1_CP022579.1 | SEQF9565.1_03158 | open | 177 [NA] | 58 [AA] | 3479532-3479708 | hypothetical protein | |
| 3076 | SEQF9565.1_CP022579.1 | SEQF9565.1_03159 | open | 504 [NA] | 167 [AA] | 3479740-3480243 | hypothetical protein | |
| 3077 | SEQF9565.1_CP022579.1 | SEQF9565.1_03160 | open | 1254 [NA] | 417 [AA] | 3480464-3481717 | cca | Multifunctional CCA protein |
| 3078 | SEQF9565.1_CP022579.1 | SEQF9565.1_03161 | open | 960 [NA] | 319 [AA] | 3481838-3482797 | 3 beta-hydroxysteroid dehydrogenaseDelta 5-->4-isomerase | |
| 3079 | SEQF9565.1_CP022579.1 | SEQF9565.1_03162 | open | 2037 [NA] | 678 [AA] | 3482928-3484964 | slt | Soluble lytic murein transglycosylase |
| 3080 | SEQF9565.1_CP022579.1 | SEQF9565.1_03163 | open | 561 [NA] | 186 [AA] | 3485155-3485715 | 5-formyltetrahydrofolate cyclo-ligase | |
| 3081 | SEQF9565.1_CP022579.1 | SEQF9565.1_03164 | open | 1527 [NA] | 508 [AA] | 3485945-3487471 | ilvA | L-threonine dehydratase biosynthetic IlvA |
| 3082 | SEQF9565.1_CP022579.1 | SEQF9565.1_03165 | open | 492 [NA] | 163 [AA] | 3487631-3488122 | yqaA | Inner membrane protein YqaA |
| 3083 | SEQF9565.1_CP022579.1 | SEQF9565.1_03166 | open | 3876 [NA] | 1291 [AA] | 3488281-3492156 | hypothetical protein | |
| 3084 | SEQF9565.1_CP022579.1 | SEQF9565.1_03167 | open | 1542 [NA] | 513 [AA] | 3492370-3493911 | hypothetical protein | |
| 3085 | SEQF9565.1_CP022579.1 | SEQF9565.1_03168 | open | 450 [NA] | 149 [AA] | 3494102-3494551 | hypothetical protein | |
| 3086 | SEQF9565.1_CP022579.1 | SEQF9565.1_03169 | open | 1605 [NA] | 534 [AA] | 3494570-3496174 | fimW | Cyclic-di-GMP receptor FimW |
| 3087 | SEQF9565.1_CP022579.1 | SEQF9565.1_03170 | open | 1329 [NA] | 442 [AA] | 3496233-3497561 | phoR | Phosphate regulon sensor protein PhoR |
| 3088 | SEQF9565.1_CP022579.1 | SEQF9565.1_03171 | open | 693 [NA] | 230 [AA] | 3497574-3498266 | phoB_2 | Phosphate regulon transcriptional regulatory protein PhoB |
| 3089 | SEQF9565.1_CP022579.1 | SEQF9565.1_03172 | open | 438 [NA] | 145 [AA] | 3498456-3498893 | hypothetical protein | |
| 3090 | SEQF9565.1_CP022579.1 | SEQF9565.1_03173 | open | 753 [NA] | 250 [AA] | 3498955-3499707 | ubiE | Ubiquinonemenaquinone biosynthesis C-methyltransferase UbiE |
| 3091 | SEQF9565.1_CP022579.1 | SEQF9565.1_03174 | open | 936 [NA] | 311 [AA] | 3499809-3500744 | hypothetical protein | |
| 3092 | SEQF9565.1_CP022579.1 | SEQF9565.1_03175 | open | 723 [NA] | 240 [AA] | 3500759-3501481 | ubiJ_2 | Ubiquinone biosynthesis accessory factor UbiJ |
| 3093 | SEQF9565.1_CP022579.1 | SEQF9565.1_03176 | open | 426 [NA] | 141 [AA] | 3501584-3502009 | atpC | ATP synthase epsilon chain |
| 3094 | SEQF9565.1_CP022579.1 | SEQF9565.1_03177 | open | 1404 [NA] | 467 [AA] | 3502088-3503491 | atpD1 | ATP synthase subunit beta 1 |
| 3095 | SEQF9565.1_CP022579.1 | SEQF9565.1_03178 | open | 864 [NA] | 287 [AA] | 3503519-3504382 | atpG | ATP synthase gamma chain |
| 3096 | SEQF9565.1_CP022579.1 | SEQF9565.1_03179 | open | 1539 [NA] | 512 [AA] | 3504401-3505939 | atpA | ATP synthase subunit alpha |
| 3097 | SEQF9565.1_CP022579.1 | SEQF9565.1_03180 | open | 537 [NA] | 178 [AA] | 3505949-3506485 | atpH_1 | ATP synthase subunit delta |
| 3098 | SEQF9565.1_CP022579.1 | SEQF9565.1_03181 | open | 471 [NA] | 156 [AA] | 3506491-3506961 | atpF | ATP synthase subunit b |
| 3099 | SEQF9565.1_CP022579.1 | SEQF9565.1_03182 | open | 249 [NA] | 82 [AA] | 3507007-3507255 | atpH_2 | ATP synthase subunit c |
| 3100 | SEQF9565.1_CP022579.1 | SEQF9565.1_03183 | open | 858 [NA] | 285 [AA] | 3507347-3508204 | atpB | ATP synthase subunit a |
| 3101 | SEQF9565.1_CP022579.1 | SEQF9565.1_03184 | open | 339 [NA] | 112 [AA] | 3508206-3508544 | hypothetical protein | |
| 3102 | SEQF9565.1_CP022579.1 | SEQF9565.1_03185 | open | 846 [NA] | 281 [AA] | 3508860-3509705 | parB | putative chromosome-partitioning protein ParB |
| 3103 | SEQF9565.1_CP022579.1 | SEQF9565.1_03186 | open | 792 [NA] | 263 [AA] | 3509776-3510567 | soj | Sporulation initiation inhibitor protein Soj |
| 3104 | SEQF9565.1_CP022579.1 | SEQF9565.1_03187 | open | 648 [NA] | 215 [AA] | 3510645-3511292 | rsmG | Ribosomal RNA small subunit methyltransferase G |
| 3105 | SEQF9565.1_CP022579.1 | SEQF9565.1_03188 | open | 1938 [NA] | 645 [AA] | 3511289-3513226 | mnmG | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG |
| 3106 | SEQF9565.1_CP022579.1 | SEQF9565.1_03189 | open | 1716 [NA] | 571 [AA] | 3513529-3515244 | bepA_9 | Beta-barrel assembly-enhancing protease |
| 3107 | SEQF9565.1_CP022579.1 | SEQF9565.1_03190 | open | 747 [NA] | 248 [AA] | 3515871-3516617 | livF_5 | High-affinity branched-chain amino acid transport ATP-binding protein LivF |
| 3108 | SEQF9565.1_CP022579.1 | SEQF9565.1_03191 | open | 1770 [NA] | 589 [AA] | 3516617-3518386 | btuD_6 | Vitamin B12 import ATP-binding protein BtuD |
| 3109 | SEQF9565.1_CP022579.1 | SEQF9565.1_03192 | open | 1038 [NA] | 345 [AA] | 3518383-3519420 | livH_6 | High-affinity branched-chain amino acid transport system permease protein LivH |
| 3110 | SEQF9565.1_CP022579.1 | SEQF9565.1_03193 | open | 1146 [NA] | 381 [AA] | 3519512-3520657 | hypothetical protein | |
| 3111 | SEQF9565.1_CP022579.1 | SEQF9565.1_03194 | open | 795 [NA] | 264 [AA] | 3520841-3521635 | yfcA_2 | putative membrane transporter protein YfcA |
| 3112 | SEQF9565.1_CP022579.1 | SEQF9565.1_03195 | open | 1353 [NA] | 450 [AA] | 3522095-3523447 | mnmE | tRNA modification GTPase MnmE |
| 3113 | SEQF9565.1_CP022579.1 | SEQF9565.1_03196 | open | 1638 [NA] | 545 [AA] | 3523527-3525164 | yidC | Membrane protein insertase YidC |
| 3114 | SEQF9565.1_CP022579.1 | SEQF9565.1_03197 | open | 210 [NA] | 69 [AA] | 3525239-3525448 | yidD | Putative membrane protein insertion efficiency factor |
| 3115 | SEQF9565.1_CP022579.1 | SEQF9565.1_03198 | open | 135 [NA] | 44 [AA] | 3525927-3526061 | rpmH | 50S ribosomal protein L34 |