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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis UMB0742 (SEQF8013.1)
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PROKKA Annotation for SEQF8013.1
Genome selected: Gardnerella vaginalis UMB0742
Contigs:1 Bases:1472679 bps
CDS:1105 rRNA:3
tmRNA:1 tRNA:45
Annotation Table [page:3]
Number of Records Found: 1105 [3 Pages]
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# Molecule PID Genome
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NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
1001 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01056 open 2115 [NA] 704 [AA] 1332692-1334806 btuD_12 Vitamin B12 import ATP-binding protein BtuD
1002 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01057 open 132 [NA] 43 [AA] 1334803-1334934 hypothetical protein
1003 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01058 open 975 [NA] 324 [AA] 1335003-1335977 hypothetical protein
1004 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01059 open 993 [NA] 330 [AA] 1335974-1336966 bcrA Bacitracin transport ATP-binding protein BcrA
1005 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01060 open 807 [NA] 268 [AA] 1337113-1337919 trmH tRNA (guanosine(18)-2-O)-methyltransferase
1006 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01061 open 930 [NA] 309 [AA] 1337977-1338906 hypothetical protein
1007 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01062 open 1341 [NA] 446 [AA] 1338965-1340305 hypothetical protein
1008 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01063 open 2595 [NA] 864 [AA] 1340450-1343044 clpB Chaperone protein ClpB
1009 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01064 open 816 [NA] 271 [AA] 1343360-1344175 hypothetical protein
1010 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01065 open 792 [NA] 263 [AA] 1344214-1345005 Pyridoxal phosphate homeostasis protein
1011 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01066 open 1050 [NA] 349 [AA] 1345048-1346097 gltX1 Glutamate--tRNA ligase 1
1012 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01067 open 786 [NA] 261 [AA] 1346248-1347033 gla Glycerol facilitator-aquaporin gla
1013 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01068 open 2238 [NA] 745 [AA] 1347643-1349880 ppk Polyphosphate kinase
1014 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01069 open 1161 [NA] 386 [AA] 1350170-1351330 hypothetical protein
1015 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01070 open 654 [NA] 217 [AA] 1351377-1352030 hypothetical protein
1016 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01071 open 639 [NA] 212 [AA] 1352322-1352960 upp Uracil phosphoribosyltransferase
1017 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01072 open 798 [NA] 265 [AA] 1353087-1353884 gatD Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
1018 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01073 open 1419 [NA] 472 [AA] 1353890-1355308 murT Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
1019 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01074 open 1461 [NA] 486 [AA] 1355324-1356784 hypothetical protein
1020 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01075 open 1362 [NA] 453 [AA] 1356840-1358201 yeeO putative FMNFAD exporter YeeO
1021 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01076 open 1782 [NA] 593 [AA] 1358621-1360402 hypothetical protein
1022 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01077 open 1212 [NA] 403 [AA] 1360565-1361776 ftsY Signal recognition particle receptor FtsY
1023 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01078 open 261 [NA] 86 [AA] 1361934-1362194 Putative glutaredoxin.1
1024 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01080 open 1416 [NA] 471 [AA] 1362492-1363907 hypothetical protein
1025 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01081 open 1128 [NA] 375 [AA] 1364158-1365285 msiK Diacetylchitobiose uptake system ATP-binding protein MsiK
1026 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01083 open 960 [NA] 319 [AA] 1365526-1366485 hypothetical protein
1027 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01084 open 963 [NA] 320 [AA] 1366581-1367543 hypothetical protein
1028 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01085 open 1824 [NA] 607 [AA] 1367676-1369499 pknD_3 Serinethreonine-protein kinase PknD
1029 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01087 open 1461 [NA] 486 [AA] 1370206-1371666 hypothetical protein
1030 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01088 open 882 [NA] 293 [AA] 1371737-1372618 ksgA Ribosomal RNA small subunit methyltransferase A
1031 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01089 open 627 [NA] 208 [AA] 1372748-1373374 hypothetical protein
1032 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01090 open 1428 [NA] 475 [AA] 1373433-1374860 cca CCA-adding enzyme
1033 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01091 open 807 [NA] 268 [AA] 1374918-1375724 rppH RNA pyrophosphohydrolase
1034 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01092 open 2394 [NA] 797 [AA] 1375705-1378098 hypothetical protein
1035 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01093 open 1797 [NA] 598 [AA] 1378095-1379891 murJ lipid II flippase MurJ
1036 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01094 open 2220 [NA] 739 [AA] 1380058-1382277 hypothetical protein
1037 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01095 open 942 [NA] 313 [AA] 1382313-1383254 trxB Thioredoxin reductase
1038 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01096 open 651 [NA] 216 [AA] 1383405-1384055 hypothetical protein
1039 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01097 open 1359 [NA] 452 [AA] 1384439-1385797 noc Nucleoid occlusion protein
1040 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01098 open 972 [NA] 323 [AA] 1385797-1386768 Iron-sulfur cluster carrier protein
1041 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01099 open 711 [NA] 236 [AA] 1387602-1388312 rsmG Ribosomal RNA small subunit methyltransferase G
1042 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01100 open 555 [NA] 184 [AA] 1388451-1389005 hypothetical protein
1043 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01101 open 1014 [NA] 337 [AA] 1389142-1390155 yidC Membrane protein insertase YidC
1044 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01102 open 321 [NA] 106 [AA] 1390155-1390475 yidD Putative membrane protein insertion efficiency factor
1045 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01103 open 408 [NA] 135 [AA] 1390514-1390921 rnpA Ribonuclease P protein component
1046 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01104 open 135 [NA] 44 [AA] 1391033-1391167 rpmH 50S ribosomal protein L34
1047 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01105 open 1614 [NA] 537 [AA] 1391557-1393170 dnaA Chromosomal replication initiator protein DnaA
1048 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01106 open 1125 [NA] 374 [AA] 1393600-1394724 dnaN Beta sliding clamp
1049 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01107 open 1302 [NA] 433 [AA] 1394823-1396124 recF DNA replication and repair protein RecF
1050 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01108 open 468 [NA] 155 [AA] 1396124-1396591 hypothetical protein
1051 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01109 open 2091 [NA] 696 [AA] 1396758-1398848 gyrB_2 DNA gyrase subunit B
1052 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01110 open 2631 [NA] 876 [AA] 1398918-1401548 gyrA_2 DNA gyrase subunit A
1053 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01111 open 666 [NA] 221 [AA] 1401698-1402363 hypothetical protein
1054 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01112 open 411 [NA] 136 [AA] 1402449-1402859 mscL Large-conductance mechanosensitive channel
1055 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01113 open 738 [NA] 245 [AA] 1402883-1403620 hypothetical protein
1056 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01114 open 702 [NA] 233 [AA] 1403776-1404477 hypothetical protein
1057 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01115 open 537 [NA] 178 [AA] 1404511-1405047 fhaB FHA domain-containing protein FhaB
1058 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01116 open 1665 [NA] 554 [AA] 1405051-1406715 hypothetical protein
1059 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01117 open 1482 [NA] 493 [AA] 1406712-1408193 mrdB Peptidoglycan glycosyltransferase MrdB
1060 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01118 open 1467 [NA] 488 [AA] 1408186-1409652 pbpA Penicillin-binding protein A
1061 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01119 open 963 [NA] 320 [AA] 1409649-1410611 pknD_4 Serinethreonine-protein kinase PknD
1062 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01120 open 2004 [NA] 667 [AA] 1410608-1412611 pknB Serinethreonine-protein kinase PknB
1063 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01121 open 1107 [NA] 368 [AA] 1413013-1414119 hypothetical protein
1064 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01122 open 756 [NA] 251 [AA] 1414165-1414920 hypothetical protein
1065 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01123 open 393 [NA] 130 [AA] 1414998-1415390 crgA Cell division protein CrgA
1066 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01124 open 1317 [NA] 438 [AA] 1415447-1416763 hypothetical protein
1067 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01125 open 600 [NA] 199 [AA] 1417020-1417619 hypothetical protein
1068 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01126 open 210 [NA] 69 [AA] 1417886-1418095 hypothetical protein
1069 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01127 open 2490 [NA] 829 [AA] 1418296-1420785 malP Maltodextrin phosphorylase
1070 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01128 open 417 [NA] 138 [AA] 1421023-1421439 hypothetical protein
1071 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01129 open 381 [NA] 126 [AA] 1421558-1421938 hypothetical protein
1072 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01130 open 1092 [NA] 363 [AA] 1422084-1423175 trpS2 Tryptophan--tRNA ligase 2
1073 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01131 open 1722 [NA] 573 [AA] 1423274-1424995 hypothetical protein
1074 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01132 open 2757 [NA] 918 [AA] 1425202-1427958 ppc Phosphoenolpyruvate carboxylase
1075 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01133 open 660 [NA] 219 [AA] 1428186-1428845 mtcA2 Carbonic anhydrase 2
1076 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01134 open 1095 [NA] 364 [AA] 1428901-1429995 hypothetical protein
1077 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01135 open 771 [NA] 256 [AA] 1429992-1430762 hypothetical protein
1078 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01136 open 1296 [NA] 431 [AA] 1430839-1432134 hypothetical protein
1079 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01137 open 480 [NA] 159 [AA] 1432192-1432671 dps DNA protection during starvation protein
1080 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01140 open 2313 [NA] 770 [AA] 1433304-1435616 kdpB Potassium-transporting ATPase ATP-binding subunit
1081 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01141 open 1479 [NA] 492 [AA] 1435927-1437405 fprA NADPH-ferredoxin reductase FprA
1082 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01142 open 879 [NA] 292 [AA] 1437511-1438389 htpX Protease HtpX
1083 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01144 open 3045 [NA] 1014 [AA] 1438661-1441705 hypothetical protein
1084 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01145 open 1179 [NA] 392 [AA] 1442051-1443229 hypothetical protein
1085 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01146 open 564 [NA] 187 [AA] 1443582-1444145 ahpC Alkyl hydroperoxide reductase C
1086 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01147 open 1674 [NA] 557 [AA] 1444272-1445945 ahpF NADH dehydrogenase
1087 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01148 open 903 [NA] 300 [AA] 1445987-1446889 oxyR Hydrogen peroxide-inducible genes activator
1088 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01149 open 1194 [NA] 397 [AA] 1447039-1448232 trpB Tryptophan synthase beta chain
1089 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01150 open 582 [NA] 193 [AA] 1448803-1449384 dcd dCTP deaminase%2C dUMP-forming
1090 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01151 open 2991 [NA] 996 [AA] 1449684-1452674 pacL Calcium-transporting ATPase
1091 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01152 open 999 [NA] 332 [AA] 1452903-1453901 putative tRNArRNA methyltransferase
1092 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01153 open 1764 [NA] 587 [AA] 1453898-1455661 hypothetical protein
1093 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01154 open 1803 [NA] 600 [AA] 1455797-1457599 hypothetical protein
1094 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01155 open 1326 [NA] 441 [AA] 1457785-1459110 tgt Queuine tRNA-ribosyltransferase
1095 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01157 open 771 [NA] 256 [AA] 1459445-1460215 hypothetical protein
1096 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01158 open 456 [NA] 151 [AA] 1460296-1460751 tadA tRNA-specific adenosine deaminase
1097 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01159 open 1011 [NA] 336 [AA] 1461142-1462152 kdgR HTH-type transcriptional regulator KdgR
1098 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01160 open 1494 [NA] 497 [AA] 1462369-1463862 araG Arabinose import ATP-binding protein AraG
1099 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01161 open 1002 [NA] 333 [AA] 1464034-1465035 rbsC Ribose import permease protein RbsC
1100 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01162 open 939 [NA] 312 [AA] 1465300-1466238 rbsB Ribose import binding protein RbsB
1101 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01163 open 396 [NA] 131 [AA] 1466532-1466927 rbsD D-ribose pyranase
1102 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01164 open 1062 [NA] 353 [AA] 1466959-1468020 rbsK Ribokinase
1103 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01165 open 969 [NA] 322 [AA] 1468263-1469231 hypothetical protein
1104 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01166 open 1920 [NA] 639 [AA] 1469446-1471365 malL Oligo-1%2C6-glucosidase
1105 SEQF8013.1_JABUHE010000001.1 SEQF8013.1_01167 open 771 [NA] 256 [AA] 1471391-1472161 cobB NAD-dependent protein deacetylase