Genome Explorer: Eubacterium limosum 8486cho (SEQF4139.1)
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PROKKA Annotation for SEQF4139.1
| Genome selected: Eubacterium limosum 8486cho | |||
| Contigs: | 28 | Bases: | 4366305 bps |
| CDS: | 4078 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 50 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 4001 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04162 | open | 288 [NA] | 95 [AA] | 3589-3876 | hypothetical protein | |
| 4002 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04163 | open | 267 [NA] | 88 [AA] | 3869-4135 | hypothetical protein | |
| 4003 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04164 | open | 582 [NA] | 193 [AA] | 4135-4716 | hypothetical protein | |
| 4004 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04165 | open | 927 [NA] | 308 [AA] | 4771-5697 | noc_3 | Nucleoid occlusion protein |
| 4005 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04166 | open | 828 [NA] | 275 [AA] | 5651-6478 | soj_4 | Sporulation initiation inhibitor protein Soj |
| 4006 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04167 | open | 105 [NA] | 34 [AA] | 6769-6873 | hypothetical protein | |
| 4007 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04168 | open | 639 [NA] | 212 [AA] | 6987-7625 | hypothetical protein | |
| 4008 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04169 | open | 315 [NA] | 104 [AA] | 7711-8025 | hypothetical protein | |
| 4009 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04170 | open | 816 [NA] | 271 [AA] | 8018-8833 | hypothetical protein | |
| 4010 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04171 | open | 1515 [NA] | 504 [AA] | 8853-10367 | Fimbrial subunit type 1 | |
| 4011 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04172 | open | 2013 [NA] | 670 [AA] | 10373-12385 | hypothetical protein | |
| 4012 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04173 | open | 993 [NA] | 330 [AA] | 12526-13518 | hypothetical protein | |
| 4013 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04174 | open | 198 [NA] | 65 [AA] | 13565-13762 | hypothetical protein | |
| 4014 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04177 | open | 1065 [NA] | 354 [AA] | 14213-15277 | ilvK | Branched-chain-amino-acid aminotransferase 2 |
| 4015 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04178 | open | 1113 [NA] | 370 [AA] | 15411-16523 | hypothetical protein | |
| 4016 | SEQF4139.1_QGUD01000018.1 | SEQF4139.1_04179 | open | 1089 [NA] | 362 [AA] | 16665-17753 | mutY | Adenine DNA glycosylase |
| 4017 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04180 | open | 1401 [NA] | 466 [AA] | 138-1538 | hypothetical protein | |
| 4018 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04181 | open | 1374 [NA] | 457 [AA] | 1690-3063 | hypothetical protein | |
| 4019 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04182 | open | 855 [NA] | 284 [AA] | 3134-3988 | lexA_3 | LexA repressor |
| 4020 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04183 | open | 249 [NA] | 82 [AA] | 4165-4413 | hypothetical protein | |
| 4021 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04184 | open | 519 [NA] | 172 [AA] | 4410-4928 | hypothetical protein | |
| 4022 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04185 | open | 153 [NA] | 50 [AA] | 4966-5118 | hypothetical protein | |
| 4023 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04186 | open | 201 [NA] | 66 [AA] | 5345-5545 | hypothetical protein | |
| 4024 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04187 | open | 150 [NA] | 49 [AA] | 5851-6000 | hypothetical protein | |
| 4025 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04188 | open | 102 [NA] | 33 [AA] | 5997-6098 | hypothetical protein | |
| 4026 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04189 | open | 132 [NA] | 43 [AA] | 6098-6229 | hypothetical protein | |
| 4027 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04190 | open | 258 [NA] | 85 [AA] | 6667-6924 | hypothetical protein | |
| 4028 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04191 | open | 495 [NA] | 164 [AA] | 6911-7405 | hypothetical protein | |
| 4029 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04192 | open | 741 [NA] | 246 [AA] | 7414-8154 | hypothetical protein | |
| 4030 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04193 | open | 411 [NA] | 136 [AA] | 8151-8561 | Single-stranded DNA-binding protein | |
| 4031 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04194 | open | 858 [NA] | 285 [AA] | 8601-9458 | hypothetical protein | |
| 4032 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04195 | open | 549 [NA] | 182 [AA] | 9451-9999 | hypothetical protein | |
| 4033 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04196 | open | 255 [NA] | 84 [AA] | 10003-10257 | hypothetical protein | |
| 4034 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04197 | open | 312 [NA] | 103 [AA] | 10254-10565 | hypothetical protein | |
| 4035 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04198 | open | 300 [NA] | 99 [AA] | 10562-10861 | hypothetical protein | |
| 4036 | SEQF4139.1_QGUD01000019.1 | SEQF4139.1_04199 | open | 339 [NA] | 112 [AA] | 10845-11183 | hypothetical protein | |
| 4037 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04200 | open | 141 [NA] | 46 [AA] | 15-155 | hypothetical protein | |
| 4038 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04201 | open | 168 [NA] | 55 [AA] | 211-378 | hypothetical protein | |
| 4039 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04202 | open | 612 [NA] | 203 [AA] | 577-1188 | hypothetical protein | |
| 4040 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04203 | open | 1194 [NA] | 397 [AA] | 1513-2706 | yfdE | Acetyl-CoA:oxalate CoA-transferase |
| 4041 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04204 | open | 291 [NA] | 96 [AA] | 2859-3149 | hypothetical protein | |
| 4042 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04205 | open | 180 [NA] | 59 [AA] | 3325-3504 | hypothetical protein | |
| 4043 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04206 | open | 1473 [NA] | 490 [AA] | 3654-5126 | amyS_2 | Alpha-amylase |
| 4044 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04207 | open | 921 [NA] | 306 [AA] | 5155-6075 | corA | Cobaltmagnesium transport protein CorA |
| 4045 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04208 | open | 453 [NA] | 150 [AA] | 6151-6603 | mscL_1 | Large-conductance mechanosensitive channel |
| 4046 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04209 | open | 348 [NA] | 115 [AA] | 6679-7026 | hypothetical protein | |
| 4047 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04210 | open | 105 [NA] | 34 [AA] | 7007-7111 | hypothetical protein | |
| 4048 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04211 | open | 561 [NA] | 186 [AA] | 7357-7917 | hypothetical protein | |
| 4049 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04212 | open | 444 [NA] | 147 [AA] | 7934-8377 | hypothetical protein | |
| 4050 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04213 | open | 300 [NA] | 99 [AA] | 8485-8784 | hypothetical protein | |
| 4051 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04214 | open | 531 [NA] | 176 [AA] | 8866-9396 | mscL_2 | Large-conductance mechanosensitive channel |
| 4052 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04215 | open | 669 [NA] | 222 [AA] | 9449-10117 | sdhB | L-serine dehydratase%2C beta chain |
| 4053 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04216 | open | 897 [NA] | 298 [AA] | 10128-11024 | sdhA | L-serine dehydratase%2C alpha chain |
| 4054 | SEQF4139.1_QGUD01000020.1 | SEQF4139.1_04217 | open | 162 [NA] | 53 [AA] | 11021-11182 | hypothetical protein | |
| 4055 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04218 | open | 1308 [NA] | 435 [AA] | 483-1790 | nadE_2 | NH(3)-dependent NAD(+) synthetase |
| 4056 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04219 | open | 1857 [NA] | 618 [AA] | 1888-3744 | hypothetical protein | |
| 4057 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04220 | open | 300 [NA] | 99 [AA] | 3900-4199 | hypothetical protein | |
| 4058 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04221 | open | 222 [NA] | 73 [AA] | 4183-4404 | hypothetical protein | |
| 4059 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04222 | open | 555 [NA] | 184 [AA] | 4626-5180 | hypothetical protein | |
| 4060 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04223 | open | 228 [NA] | 75 [AA] | 5237-5464 | hypothetical protein | |
| 4061 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04224 | open | 234 [NA] | 77 [AA] | 5479-5712 | hypothetical protein | |
| 4062 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04225 | open | 576 [NA] | 191 [AA] | 5918-6493 | hypothetical protein | |
| 4063 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04226 | open | 201 [NA] | 66 [AA] | 6504-6704 | hypothetical protein | |
| 4064 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04227 | open | 612 [NA] | 203 [AA] | 6709-7320 | hypothetical protein | |
| 4065 | SEQF4139.1_QGUD01000021.1 | SEQF4139.1_04228 | open | 438 [NA] | 145 [AA] | 7317-7754 | hypothetical protein | |
| 4066 | SEQF4139.1_QGUD01000023.1 | SEQF4139.1_04232 | open | 1122 [NA] | 373 [AA] | 396-1517 | hypothetical protein | |
| 4067 | SEQF4139.1_QGUD01000023.1 | SEQF4139.1_04233 | open | 321 [NA] | 106 [AA] | 1518-1838 | hypothetical protein | |
| 4068 | SEQF4139.1_QGUD01000023.1 | SEQF4139.1_04234 | open | 1074 [NA] | 357 [AA] | 1840-2913 | Putative prophage phiRv2 integrase | |
| 4069 | SEQF4139.1_QGUD01000023.1 | SEQF4139.1_04235 | open | 180 [NA] | 59 [AA] | 2913-3092 | hypothetical protein | |
| 4070 | SEQF4139.1_QGUD01000024.1 | SEQF4139.1_04236 | open | 1161 [NA] | 386 [AA] | 332-1492 | hypothetical protein | |
| 4071 | SEQF4139.1_QGUD01000024.1 | SEQF4139.1_04237 | open | 303 [NA] | 100 [AA] | 1493-1795 | hypothetical protein | |
| 4072 | SEQF4139.1_QGUD01000024.1 | SEQF4139.1_04238 | open | 936 [NA] | 311 [AA] | 1770-2705 | Putative prophage phiRv2 integrase | |
| 4073 | SEQF4139.1_QGUD01000024.1 | SEQF4139.1_04239 | open | 180 [NA] | 59 [AA] | 2870-3049 | hypothetical protein | |
| 4074 | SEQF4139.1_QGUD01000025.1 | SEQF4139.1_04240 | open | 744 [NA] | 247 [AA] | 16-759 | opuD_7 | Glycine betaine transporter OpuD |
| 4075 | SEQF4139.1_QGUD01000025.1 | SEQF4139.1_04241 | open | 324 [NA] | 107 [AA] | 923-1246 | putative glycine betaine transporter | |
| 4076 | SEQF4139.1_QGUD01000026.1 | SEQF4139.1_04242 | open | 1476 [NA] | 491 [AA] | 95-1570 | IS1182 family transposase ISPye18 | |
| 4077 | SEQF4139.1_QGUD01000027.1 | SEQF4139.1_04243 | open | 588 [NA] | 195 [AA] | 364-951 | sigI_2 | RNA polymerase sigma factor SigI |
| 4078 | SEQF4139.1_QGUD01000027.1 | SEQF4139.1_04244 | open | 201 [NA] | 66 [AA] | 960-1160 | hypothetical protein |