Genome Explorer: Eubacterium limosum KIST612 (SEQF1927.2)
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PROKKA Annotation for SEQF1927.2
| Genome selected: Eubacterium limosum KIST612 | |||
| Contigs: | 1 | Bases: | 4316707 bps |
| CDS: | 4083 | rRNA: | 16 |
| tmRNA: | 1 | tRNA: | 59 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 4001 | SEQF1927.2_CP002273.2 | SEQF1927.2_04219 | open | 774 [NA] | 257 [AA] | 4230321-4231094 | hypothetical protein | |
| 4002 | SEQF1927.2_CP002273.2 | SEQF1927.2_04220 | open | 516 [NA] | 171 [AA] | 4231111-4231626 | hypothetical protein | |
| 4003 | SEQF1927.2_CP002273.2 | SEQF1927.2_04221 | open | 546 [NA] | 181 [AA] | 4231963-4232508 | hypothetical protein | |
| 4004 | SEQF1927.2_CP002273.2 | SEQF1927.2_04222 | open | 285 [NA] | 94 [AA] | 4232505-4232789 | hypothetical protein | |
| 4005 | SEQF1927.2_CP002273.2 | SEQF1927.2_04223 | open | 3726 [NA] | 1241 [AA] | 4232804-4236529 | hypothetical protein | |
| 4006 | SEQF1927.2_CP002273.2 | SEQF1927.2_04224 | open | 174 [NA] | 57 [AA] | 4236535-4236708 | hypothetical protein | |
| 4007 | SEQF1927.2_CP002273.2 | SEQF1927.2_04225 | open | 303 [NA] | 100 [AA] | 4236696-4236998 | hypothetical protein | |
| 4008 | SEQF1927.2_CP002273.2 | SEQF1927.2_04226 | open | 393 [NA] | 130 [AA] | 4237260-4237652 | hypothetical protein | |
| 4009 | SEQF1927.2_CP002273.2 | SEQF1927.2_04227 | open | 1365 [NA] | 454 [AA] | 4237944-4239308 | rlmCD_2 | 23S rRNA (uracil-C(5))-methyltransferase RlmCD |
| 4010 | SEQF1927.2_CP002273.2 | SEQF1927.2_04228 | open | 597 [NA] | 198 [AA] | 4239468-4240064 | hypothetical protein | |
| 4011 | SEQF1927.2_CP002273.2 | SEQF1927.2_04229 | open | 798 [NA] | 265 [AA] | 4240164-4240961 | ytrE | ABC transporter ATP-binding protein YtrE |
| 4012 | SEQF1927.2_CP002273.2 | SEQF1927.2_04230 | open | 897 [NA] | 298 [AA] | 4240948-4241844 | hypothetical protein | |
| 4013 | SEQF1927.2_CP002273.2 | SEQF1927.2_04231 | open | 1008 [NA] | 335 [AA] | 4242010-4243017 | hypothetical protein | |
| 4014 | SEQF1927.2_CP002273.2 | SEQF1927.2_04232 | open | 822 [NA] | 273 [AA] | 4243564-4244385 | murR | HTH-type transcriptional regulator MurR |
| 4015 | SEQF1927.2_CP002273.2 | SEQF1927.2_04233 | open | 894 [NA] | 297 [AA] | 4244446-4245339 | bglK | Beta-glucoside kinase |
| 4016 | SEQF1927.2_CP002273.2 | SEQF1927.2_04234 | open | 234 [NA] | 77 [AA] | 4245352-4245585 | hypothetical protein | |
| 4017 | SEQF1927.2_CP002273.2 | SEQF1927.2_04235 | open | 1530 [NA] | 509 [AA] | 4245582-4247111 | sglT | Sodiumglucose cotransporter |
| 4018 | SEQF1927.2_CP002273.2 | SEQF1927.2_04236 | open | 870 [NA] | 289 [AA] | 4247151-4248020 | nanA | N-acetylneuraminate lyase |
| 4019 | SEQF1927.2_CP002273.2 | SEQF1927.2_04237 | open | 678 [NA] | 225 [AA] | 4248071-4248748 | nanE | Putative N-acetylmannosamine-6-phosphate 2-epimerase |
| 4020 | SEQF1927.2_CP002273.2 | SEQF1927.2_04238 | open | 741 [NA] | 246 [AA] | 4248996-4249736 | gamA | putative glucosamine-6-phosphate deaminase 2 |
| 4021 | SEQF1927.2_CP002273.2 | SEQF1927.2_04239 | open | 1116 [NA] | 371 [AA] | 4249733-4250848 | nagA | N-acetylglucosamine-6-phosphate deacetylase |
| 4022 | SEQF1927.2_CP002273.2 | SEQF1927.2_04240 | open | 324 [NA] | 107 [AA] | 4250909-4251232 | Thioredoxin C-1 | |
| 4023 | SEQF1927.2_CP002273.2 | SEQF1927.2_04241 | open | 558 [NA] | 185 [AA] | 4251244-4251801 | hypothetical protein | |
| 4024 | SEQF1927.2_CP002273.2 | SEQF1927.2_04242 | open | 3171 [NA] | 1056 [AA] | 4251843-4255013 | smc_4 | Chromosome partition protein Smc |
| 4025 | SEQF1927.2_CP002273.2 | SEQF1927.2_04243 | open | 1164 [NA] | 387 [AA] | 4255010-4256173 | sbcD | Nuclease SbcCD subunit D |
| 4026 | SEQF1927.2_CP002273.2 | SEQF1927.2_04244 | open | 513 [NA] | 170 [AA] | 4256319-4256831 | hypothetical protein | |
| 4027 | SEQF1927.2_CP002273.2 | SEQF1927.2_04245 | open | 162 [NA] | 53 [AA] | 4256960-4257121 | Rubredoxin | |
| 4028 | SEQF1927.2_CP002273.2 | SEQF1927.2_04246 | open | 900 [NA] | 299 [AA] | 4257299-4258198 | hypothetical protein | |
| 4029 | SEQF1927.2_CP002273.2 | SEQF1927.2_04247 | open | 1410 [NA] | 469 [AA] | 4258564-4259973 | mtgB_31 | Glycine betaine methyltransferase |
| 4030 | SEQF1927.2_CP002273.2 | SEQF1927.2_04248 | open | 1278 [NA] | 425 [AA] | 4260082-4261359 | yqcE_13 | Inner membrane protein YqcE |
| 4031 | SEQF1927.2_CP002273.2 | SEQF1927.2_04249 | open | 1620 [NA] | 539 [AA] | 4261526-4263145 | betL_4 | Glycine betaine transporter BetL |
| 4032 | SEQF1927.2_CP002273.2 | SEQF1927.2_04250 | open | 1587 [NA] | 528 [AA] | 4263310-4264896 | opuD_5 | Glycine betaine transporter OpuD |
| 4033 | SEQF1927.2_CP002273.2 | SEQF1927.2_04251 | open | 1434 [NA] | 477 [AA] | 4264995-4266428 | norR_12 | Anaerobic nitric oxide reductase transcription regulator NorR |
| 4034 | SEQF1927.2_CP002273.2 | SEQF1927.2_04252 | open | 1365 [NA] | 454 [AA] | 4266540-4267904 | hypothetical protein | |
| 4035 | SEQF1927.2_CP002273.2 | SEQF1927.2_04253 | open | 1095 [NA] | 364 [AA] | 4267909-4269003 | pglH | GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1%2C4-N-acetyl-D-galactosaminyltransferase |
| 4036 | SEQF1927.2_CP002273.2 | SEQF1927.2_04254 | open | 1074 [NA] | 357 [AA] | 4269017-4270090 | gtfA | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit |
| 4037 | SEQF1927.2_CP002273.2 | SEQF1927.2_04255 | open | 1194 [NA] | 397 [AA] | 4270094-4271287 | hypothetical protein | |
| 4038 | SEQF1927.2_CP002273.2 | SEQF1927.2_04256 | open | 1257 [NA] | 418 [AA] | 4271274-4272530 | hypothetical protein | |
| 4039 | SEQF1927.2_CP002273.2 | SEQF1927.2_04257 | open | 975 [NA] | 324 [AA] | 4272570-4273544 | wbgU_4 | UDP-N-acetylglucosamine 4-epimerase |
| 4040 | SEQF1927.2_CP002273.2 | SEQF1927.2_04258 | open | 1314 [NA] | 437 [AA] | 4273546-4274859 | wbpA_4 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase |
| 4041 | SEQF1927.2_CP002273.2 | SEQF1927.2_04259 | open | 1089 [NA] | 362 [AA] | 4274837-4275925 | mshA | D-inositol-3-phosphate glycosyltransferase |
| 4042 | SEQF1927.2_CP002273.2 | SEQF1927.2_04260 | open | 1128 [NA] | 375 [AA] | 4275925-4277052 | wbpI_2 | UDP-2%2C3-diacetamido-2%2C3-dideoxy-D-glucuronate 2-epimerase |
| 4043 | SEQF1927.2_CP002273.2 | SEQF1927.2_04261 | open | 1197 [NA] | 398 [AA] | 4277009-4278205 | wbjC | UDP-2-acetamido-2%2C6-beta-L-arabino-hexul-4-ose reductase |
| 4044 | SEQF1927.2_CP002273.2 | SEQF1927.2_04262 | open | 1044 [NA] | 347 [AA] | 4278216-4279259 | capD | UDP-glucose 4-epimerase |
| 4045 | SEQF1927.2_CP002273.2 | SEQF1927.2_04263 | open | 1197 [NA] | 398 [AA] | 4279268-4280464 | bshA | N-acetyl-alpha-D-glucosaminyl L-malate synthase |
| 4046 | SEQF1927.2_CP002273.2 | SEQF1927.2_04264 | open | 657 [NA] | 218 [AA] | 4280461-4281117 | epsL | putative sugar transferase EpsL |
| 4047 | SEQF1927.2_CP002273.2 | SEQF1927.2_04265 | open | 927 [NA] | 308 [AA] | 4281737-4282663 | hypothetical protein | |
| 4048 | SEQF1927.2_CP002273.2 | SEQF1927.2_04266 | open | 963 [NA] | 320 [AA] | 4282683-4283645 | hypothetical protein | |
| 4049 | SEQF1927.2_CP002273.2 | SEQF1927.2_04267 | open | 264 [NA] | 87 [AA] | 4283658-4283921 | hypothetical protein | |
| 4050 | SEQF1927.2_CP002273.2 | SEQF1927.2_04268 | open | 687 [NA] | 228 [AA] | 4283908-4284594 | tmk | Thymidylate kinase |
| 4051 | SEQF1927.2_CP002273.2 | SEQF1927.2_04269 | open | 1347 [NA] | 448 [AA] | 4284654-4286000 | speA | Arginine decarboxylase |
| 4052 | SEQF1927.2_CP002273.2 | SEQF1927.2_04270 | open | 324 [NA] | 107 [AA] | 4286165-4286488 | Thioredoxin C-1 | |
| 4053 | SEQF1927.2_CP002273.2 | SEQF1927.2_04271 | open | 336 [NA] | 111 [AA] | 4286705-4287040 | hypothetical protein | |
| 4054 | SEQF1927.2_CP002273.2 | SEQF1927.2_04273 | open | 333 [NA] | 110 [AA] | 4287309-4287641 | hypothetical protein | |
| 4055 | SEQF1927.2_CP002273.2 | SEQF1927.2_04274 | open | 2004 [NA] | 667 [AA] | 4287681-4289684 | hypothetical protein | |
| 4056 | SEQF1927.2_CP002273.2 | SEQF1927.2_04275 | open | 1947 [NA] | 648 [AA] | 4289767-4291713 | metG_2 | Methionine--tRNA ligase |
| 4057 | SEQF1927.2_CP002273.2 | SEQF1927.2_04277 | open | 831 [NA] | 276 [AA] | 4292275-4293105 | rsmI | Ribosomal RNA small subunit methyltransferase I |
| 4058 | SEQF1927.2_CP002273.2 | SEQF1927.2_04278 | open | 1386 [NA] | 461 [AA] | 4293120-4294505 | Ferredoxin--NADP reductase | |
| 4059 | SEQF1927.2_CP002273.2 | SEQF1927.2_04279 | open | 1341 [NA] | 446 [AA] | 4294641-4295981 | dnaC | Replicative DNA helicase |
| 4060 | SEQF1927.2_CP002273.2 | SEQF1927.2_04280 | open | 450 [NA] | 149 [AA] | 4296039-4296488 | rplI | 50S ribosomal protein L9 |
| 4061 | SEQF1927.2_CP002273.2 | SEQF1927.2_04281 | open | 1980 [NA] | 659 [AA] | 4296485-4298464 | gdpP | Cyclic-di-AMP phosphodiesterase GdpP |
| 4062 | SEQF1927.2_CP002273.2 | SEQF1927.2_04282 | open | 939 [NA] | 312 [AA] | 4298461-4299399 | hypothetical protein | |
| 4063 | SEQF1927.2_CP002273.2 | SEQF1927.2_04283 | open | 906 [NA] | 301 [AA] | 4299714-4300619 | hslO | 33 kDa chaperonin |
| 4064 | SEQF1927.2_CP002273.2 | SEQF1927.2_04284 | open | 873 [NA] | 290 [AA] | 4300801-4301673 | pdxS | Pyridoxal 5-phosphate synthase subunit PdxS |
| 4065 | SEQF1927.2_CP002273.2 | SEQF1927.2_04285 | open | 1419 [NA] | 472 [AA] | 4301799-4303217 | gabR | HTH-type transcriptional regulatory protein GabR |
| 4066 | SEQF1927.2_CP002273.2 | SEQF1927.2_04286 | open | 270 [NA] | 89 [AA] | 4303228-4303497 | acyP | Acylphosphatase |
| 4067 | SEQF1927.2_CP002273.2 | SEQF1927.2_04287 | open | 228 [NA] | 75 [AA] | 4303538-4303765 | rpsR | 30S ribosomal protein S18 |
| 4068 | SEQF1927.2_CP002273.2 | SEQF1927.2_04288 | open | 465 [NA] | 154 [AA] | 4303783-4304247 | ssb | Single-stranded DNA-binding protein |
| 4069 | SEQF1927.2_CP002273.2 | SEQF1927.2_04289 | open | 288 [NA] | 95 [AA] | 4304258-4304545 | rpsF | 30S ribosomal protein S6 |
| 4070 | SEQF1927.2_CP002273.2 | SEQF1927.2_04290 | open | 204 [NA] | 67 [AA] | 4304670-4304873 | hypothetical protein | |
| 4071 | SEQF1927.2_CP002273.2 | SEQF1927.2_04291 | open | 882 [NA] | 293 [AA] | 4304886-4305767 | mscS | Small-conductance mechanosensitive channel |
| 4072 | SEQF1927.2_CP002273.2 | SEQF1927.2_04292 | open | 651 [NA] | 216 [AA] | 4305780-4306430 | hypothetical protein | |
| 4073 | SEQF1927.2_CP002273.2 | SEQF1927.2_04293 | open | 1077 [NA] | 358 [AA] | 4306433-4307509 | hypothetical protein | |
| 4074 | SEQF1927.2_CP002273.2 | SEQF1927.2_04294 | open | 900 [NA] | 299 [AA] | 4307496-4308395 | spo0J | Stage 0 sporulation protein J |
| 4075 | SEQF1927.2_CP002273.2 | SEQF1927.2_04295 | open | 765 [NA] | 254 [AA] | 4308399-4309163 | soj_4 | Sporulation initiation inhibitor protein Soj |
| 4076 | SEQF1927.2_CP002273.2 | SEQF1927.2_04296 | open | 810 [NA] | 269 [AA] | 4309466-4310275 | noc_3 | Nucleoid occlusion protein |
| 4077 | SEQF1927.2_CP002273.2 | SEQF1927.2_04297 | open | 720 [NA] | 239 [AA] | 4310326-4311045 | rsmG | Ribosomal RNA small subunit methyltransferase G |
| 4078 | SEQF1927.2_CP002273.2 | SEQF1927.2_04298 | open | 1902 [NA] | 633 [AA] | 4311038-4312939 | mnmG | tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG |
| 4079 | SEQF1927.2_CP002273.2 | SEQF1927.2_04299 | open | 1377 [NA] | 458 [AA] | 4312949-4314325 | mnmE_2 | tRNA modification GTPase MnmE |
| 4080 | SEQF1927.2_CP002273.2 | SEQF1927.2_04300 | open | 627 [NA] | 208 [AA] | 4314506-4315132 | hypothetical protein | |
| 4081 | SEQF1927.2_CP002273.2 | SEQF1927.2_04301 | open | 924 [NA] | 307 [AA] | 4315195-4316118 | yidC | Membrane protein insertase YidC |
| 4082 | SEQF1927.2_CP002273.2 | SEQF1927.2_04302 | open | 213 [NA] | 70 [AA] | 4316152-4316364 | yidD | Putative membrane protein insertion efficiency factor |
| 4083 | SEQF1927.2_CP002273.2 | SEQF1927.2_04303 | open | 351 [NA] | 116 [AA] | 4316357-4316707 | rnpA | Ribonuclease P protein component |