Genome Explorer: Limosilactobacillus fermentum 90 TC-4 (SEQF9241.1)
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NCBI Annotation for SEQF9241.1
| Genome selected: Limosilactobacillus fermentum 90 TC-4 | |||
| Contigs: | 93 | Bases: | 1822484 bps |
| CDS: | 1620 | rRNA: | 11 |
| tmRNA: | 0 | tRNA: | 54 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1501 | LBDH01000060.1 | KLD49702.1 | open | 1590 [NA] | 529 [AA] | 4026-5615 | WU69_08535 | asparagine synthase |
| 1502 | LBDH01000060.1 | KLD49703.1 | open | 1110 [NA] | 369 [AA] | 6201-7310 | WU69_08540 | transporter |
| 1503 | LBDH01000061.1 | KLD49586.1 | open | 465 [NA] | 154 [AA] | <1-465 | WU69_08545 | inosine-5-monophosphate dehydrogenase |
| 1504 | LBDH01000061.1 | KLD49587.1 | open | 1002 [NA] | 333 [AA] | 813-1814 | WU69_08550 | transcriptional regulator |
| 1505 | LBDH01000061.1 | KLD49588.1 | open | 771 [NA] | 256 [AA] | 1814-2584 | WU69_08555 | exopolysaccharide biosynthesis protein |
| 1506 | LBDH01000061.1 | KLD49589.1 | open | 744 [NA] | 247 [AA] | 2601-3344 | WU69_08560 | exopolysaccharide biosynthesis protein |
| 1507 | LBDH01000061.1 | KLD49590.1 | open | 771 [NA] | 256 [AA] | 3365-4135 | WU69_08565 | exopolysaccharide biosynthesis protein |
| 1508 | LBDH01000061.1 | KLD49591.1 | open | 918 [NA] | 305 [AA] | 4166-5083 | WU69_08570 | epimerase |
| 1509 | LBDH01000062.1 | KLD49580.1 | open | 1140 [NA] | 379 [AA] | 346-1485 | WU69_08580 | phosphoribosylaminoimidazole carboxylase |
| 1510 | LBDH01000062.1 | KLD49581.1 | open | 1296 [NA] | 431 [AA] | 1504-2799 | WU69_08585 | adenylosuccinate lyase |
| 1511 | LBDH01000062.1 | KLD49582.1 | open | 595 [NA] | 198 [AA] | 3139->3733 | WU69_08590 | hypothetical protein |
| 1512 | LBDH01000063.1 | KLD49452.1 | open | 284 [NA] | 94 [AA] | <1-284 | WU69_08595 | transposase |
| 1513 | LBDH01000063.1 | KLD49453.1 | open | 924 [NA] | 307 [AA] | 482-1405 | WU69_08600 | integrase |
| 1514 | LBDH01000063.1 | KLD49454.1 | open | 1881 [NA] | 626 [AA] | 1686-3566 | WU69_08605 | beta-galactosidase |
| 1515 | LBDH01000063.1 | KLD49455.1 | open | 960 [NA] | 319 [AA] | 3550-4509 | WU69_08610 | beta-galactosidase |
| 1516 | LBDH01000063.1 | KLD49456.1 | open | 606 [NA] | 201 [AA] | 4609->5214 | WU69_08615 | transposase |
| 1517 | LBDH01000064.1 | KLD49368.1 | open | 468 [NA] | 155 [AA] | 800-1267 | WU69_08625 | NAD(P)H dehydrogenase (quinone) |
| 1518 | LBDH01000064.1 | KLD49369.1 | open | 1455 [NA] | 484 [AA] | 1572-3026 | WU69_08630 | amino acid permease |
| 1519 | LBDH01000064.1 | KLD49370.1 | open | 222 [NA] | 74 [AA] | 3007->3228 | WU69_08635 | hypothetical protein |
| 1520 | LBDH01000064.1 | KLD49371.1 | open | 366 [NA] | 121 [AA] | 289-654 | WU69_08620 | hypothetical protein |
| 1521 | LBDH01000065.1 | KLD49271.1 | open | 1062 [NA] | 353 [AA] | 1797-2858 | WU69_08650 | ABC transporter permease |
| 1522 | LBDH01000065.1 | KLD49272.1 | open | 693 [NA] | 230 [AA] | 2871-3563 | WU69_08655 | peptide ABC transporter ATP-binding protein |
| 1523 | LBDH01000065.1 | KLD49273.1 | open | 459 [NA] | 152 [AA] | 3725-4183 | WU69_08660 | arginine repressor |
| 1524 | LBDH01000065.1 | KLD49274.1 | open | 468 [NA] | 155 [AA] | 4267->4735 | WU69_08665 | integrase |
| 1525 | LBDH01000065.1 | KLD49275.1 | open | 603 [NA] | 200 [AA] | 1271-1873 | WU69_08645 | transcriptional regulator |
| 1526 | LBDH01000066.1 | KLD48218.1 | open | 546 [NA] | 181 [AA] | <1-547 | WU69_08670 | transposase |
| 1527 | LBDH01000066.1 | KLD48219.1 | open | 714 [NA] | 237 [AA] | 2697-3410 | WU69_08680 | nicotinamide mononucleotide transporter |
| 1528 | LBDH01000067.1 | KLD48142.1 | open | 414 [NA] | 137 [AA] | 106-519 | WU69_08685 | universal stress protein UspA |
| 1529 | LBDH01000067.1 | KLD48143.1 | open | 405 [NA] | 134 [AA] | 598-1002 | WU69_08690 | hypothetical protein |
| 1530 | LBDH01000067.1 | KLD48144.1 | open | 1293 [NA] | 430 [AA] | 1164-2456 | WU69_08695 | recombinase RarA |
| 1531 | LBDH01000067.1 | KLD48145.1 | open | 474 [NA] | 157 [AA] | 2453-2926 | WU69_08700 | hypothetical protein |
| 1532 | LBDH01000067.1 | KLD48146.1 | open | 411 [NA] | 136 [AA] | 3016-3426 | WU69_08705 | glyoxalase |
| 1533 | LBDH01000067.1 | KLD48147.1 | open | 747 [NA] | 248 [AA] | 3463-4209 | WU69_08710 | fructose permease |
| 1534 | LBDH01000068.1 | KLD48139.1 | open | 1554 [NA] | 517 [AA] | 176-1729 | WU69_08715 | GMP synthase |
| 1535 | LBDH01000068.1 | KLD48140.1 | open | 180 [NA] | 59 [AA] | 2043-2222 | WU69_08720 | hypothetical protein |
| 1536 | LBDH01000068.1 | KLD48141.1 | open | 693 [NA] | 230 [AA] | 3617-4309 | WU69_08730 | hypothetical protein |
| 1537 | LBDH01000069.1 | KLD47568.1 | open | 432 [NA] | 143 [AA] | 625-1056 | WU69_08735 | transcriptional regulator |
| 1538 | LBDH01000069.1 | KLD47569.1 | open | 2196 [NA] | 731 [AA] | 1307-3502 | WU69_08740 | copper-transporting ATPase |
| 1539 | LBDH01000069.1 | KLD47570.1 | open | 297 [NA] | 98 [AA] | 3738-4034 | WU69_08745 | lysophospholipase |
| 1540 | LBDH01000070.1 | KLD46978.1 | open | 867 [NA] | 289 [AA] | <1-867 | WU69_08750 | poly(glycerol-phosphate) alpha-glucosyltransferase |
| 1541 | LBDH01000070.1 | KLD46979.1 | open | 393 [NA] | 130 [AA] | 1010-1402 | WU69_08755 | hypothetical protein |
| 1542 | LBDH01000070.1 | KLD46980.1 | open | 633 [NA] | 210 [AA] | 1704-2336 | WU69_08760 | hypothetical protein |
| 1543 | LBDH01000070.1 | KLD46981.1 | open | 750 [NA] | 249 [AA] | 2312-3061 | WU69_08765 | hypothetical protein |
| 1544 | LBDH01000070.1 | KLD46982.1 | open | 627 [NA] | 208 [AA] | 3148-3774 | WU69_08770 | Orotate phosphoribosyltransferase |
| 1545 | LBDH01000071.1 | KLD46932.1 | open | 789 [NA] | 262 [AA] | 119-907 | WU69_08775 | protein tyrosine phosphatase |
| 1546 | LBDH01000071.1 | KLD46933.1 | open | 513 [NA] | 170 [AA] | 926-1438 | WU69_08780 | hypothetical protein |
| 1547 | LBDH01000071.1 | KLD46934.1 | open | 225 [NA] | 74 [AA] | 1451-1675 | WU69_08785 | hypothetical protein |
| 1548 | LBDH01000071.1 | KLD46935.1 | open | 735 [NA] | 244 [AA] | 1841-2575 | WU69_08790 | arginine ABC transporter ATP-binding protein |
| 1549 | LBDH01000071.1 | KLD46936.1 | open | 690 [NA] | 229 [AA] | 2577-3266 | WU69_08795 | cysteine ABC transporter permease |
| 1550 | LBDH01000071.1 | KLD46937.1 | open | 801 [NA] | 266 [AA] | 3369-4169 | WU69_08800 | amino acid ABC transporter substrate-binding protein |
| 1551 | LBDH01000072.1 | KLD46496.1 | open | 1290 [NA] | 429 [AA] | 240-1529 | WU69_08805 | argininosuccinate synthase |
| 1552 | LBDH01000072.1 | KLD46497.1 | open | 1383 [NA] | 460 [AA] | 1529-2911 | WU69_08810 | argininosuccinate lyase |
| 1553 | LBDH01000073.1 | KLD46427.1 | open | 621 [NA] | 206 [AA] | 419-1039 | WU69_08815 | integrase |
| 1554 | LBDH01000073.1 | KLD46428.1 | open | 1434 [NA] | 477 [AA] | 2103-3536 | WU69_08825 | triphosphoribosyl-dephospho-CoA synthase |
| 1555 | LBDH01000073.1 | KLD46429.1 | open | 1455 [NA] | 484 [AA] | 3675-5129 | WU69_08830 | citrate lyase subunit alpha |
| 1556 | LBDH01000073.1 | KLD46430.1 | open | 900 [NA] | 299 [AA] | 5119-6018 | WU69_08835 | citrate lyase subunit beta |
| 1557 | LBDH01000073.1 | KLD46431.1 | open | 1050 [NA] | 349 [AA] | 6316-7365 | WU69_08845 | hypothetical protein |
| 1558 | LBDH01000073.1 | KLD46432.1 | open | 294 [NA] | 97 [AA] | 7952->8245 | WU69_08855 | transposase |
| 1559 | LBDH01000074.1 | KLD46002.1 | open | 585 [NA] | 195 [AA] | <1-585 | WU69_08860 | modification methylase |
| 1560 | LBDH01000074.1 | KLD46003.1 | open | 939 [NA] | 312 [AA] | 611-1549 | WU69_08865 | hypothetical protein |
| 1561 | LBDH01000074.1 | KLD46004.1 | open | 741 [NA] | 246 [AA] | 1549-2289 | WU69_08870 | hypothetical protein |
| 1562 | LBDH01000075.1 | KLD45539.1 | open | 1662 [NA] | 553 [AA] | 272-1933 | WU69_08880 | formate--tetrahydrofolate ligase |
| 1563 | LBDH01000075.1 | KLD45540.1 | open | 1041 [NA] | 346 [AA] | 2021-3061 | WU69_08885 | membrane protein |
| 1564 | LBDH01000075.1 | KLD45541.1 | open | 456 [NA] | 151 [AA] | 3350-3805 | WU69_08890 | transposase |
| 1565 | LBDH01000076.1 | KLD45474.1 | open | 459 [NA] | 152 [AA] | 3113->3572 | WU69_08910 | integrase |
| 1566 | LBDH01000077.1 | KLD45176.1 | open | 843 [NA] | 280 [AA] | 474-1316 | WU69_08915 | ABC transporter substrate-binding protein |
| 1567 | LBDH01000077.1 | KLD45177.1 | open | 1065 [NA] | 354 [AA] | 1342-2406 | WU69_08920 | methionine ABC transporter ATP-binding protein |
| 1568 | LBDH01000077.1 | KLD45178.1 | open | 598 [NA] | 199 [AA] | 2399->2996 | WU69_08925 | methionine ABC transporter permease |
| 1569 | LBDH01000078.1 | KLD44874.1 | open | 735 [NA] | 244 [AA] | <1-737 | WU69_08930 | hypothetical protein |
| 1570 | LBDH01000078.1 | KLD44875.1 | open | 723 [NA] | 240 [AA] | 1272-1994 | WU69_08935 | phosphoribosylaminoimidazole-succinocarboxamide synthase |
| 1571 | LBDH01000078.1 | KLD44876.1 | open | 243 [NA] | 80 [AA] | 1997-2239 | WU69_08940 | phosphoribosylformylglycinamidine synthase |
| 1572 | LBDH01000078.1 | KLD44877.1 | open | 681 [NA] | 226 [AA] | 2240-2920 | WU69_08945 | phosphoribosylformylglycinamidine synthase |
| 1573 | LBDH01000078.1 | KLD44878.1 | open | 876 [NA] | 292 [AA] | 2924->3799 | WU69_08950 | phosphoribosylformylglycinamidine synthase |
| 1574 | LBDH01000079.1 | KLD44638.1 | open | 180 [NA] | 59 [AA] | 2195-2374 | WU69_08970 | hypothetical protein |
| 1575 | LBDH01000080.1 | KLD44418.1 | open | 1059 [NA] | 353 [AA] | <1-1059 | WU69_08990 | x-prolyl-dipeptidyl aminopeptidase |
| 1576 | LBDH01000080.1 | KLD44419.1 | open | 534 [NA] | 177 [AA] | 2513-3046 | WU69_09000 | hypothetical protein |
| 1577 | LBDH01000080.1 | KLD44420.1 | open | 855 [NA] | 284 [AA] | 1589-2443 | WU69_08995 | short-chain dehydrogenase |
| 1578 | LBDH01000081.1 | KLD44258.1 | open | 622 [NA] | 207 [AA] | <1-622 | WU69_09005 | pyridine nucleotide-disulfide oxidoreductase |
| 1579 | LBDH01000081.1 | KLD44259.1 | open | 315 [NA] | 104 [AA] | 776-1090 | WU69_09010 | thioredoxin |
| 1580 | LBDH01000081.1 | KLD44260.1 | open | 927 [NA] | 308 [AA] | 1238-2164 | WU69_09015 | transporter |
| 1581 | LBDH01000081.1 | KLD44261.1 | open | 249 [NA] | 82 [AA] | 2105-2353 | WU69_09020 | hypothetical protein |
| 1582 | LBDH01000082.1 | KLD44109.1 | open | 1494 [NA] | 497 [AA] | 311-1804 | WU69_09025 | lysyl-tRNA synthetase |
| 1583 | LBDH01000082.1 | KLD44110.1 | open | 1002 [NA] | 333 [AA] | 1820-2821 | WU69_09030 | tRNA-dihydrouridine synthase |
| 1584 | LBDH01000083.1 | KLD43986.1 | open | 1212 [NA] | 403 [AA] | 118-1329 | WU69_09035 | membrane protein |
| 1585 | LBDH01000083.1 | KLD43987.1 | open | 1086 [NA] | 361 [AA] | 1537->2623 | WU69_09040 | MFS transporter |
| 1586 | LBDH01000084.1 | KLD43892.1 | open | 298 [NA] | 99 [AA] | <1-298 | WU69_09045 | transposase |
| 1587 | LBDH01000084.1 | KLD43893.1 | open | 546 [NA] | 181 [AA] | 709-1254 | WU69_09050 | isochorismatase |
| 1588 | LBDH01000084.1 | KLD43894.1 | open | 717 [NA] | 238 [AA] | 2798-3514 | WU69_09060 | ADP-ribose pyrophosphatase |
| 1589 | LBDH01000084.1 | KLD43895.1 | open | 313 [NA] | 104 [AA] | 3878->4190 | WU69_09065 | integrase |
| 1590 | LBDH01000085.1 | KLD43861.1 | open | 1383 [NA] | 460 [AA] | 157-1539 | WU69_09070 | succinate-semialdehyde dehydrogenase |
| 1591 | LBDH01000085.1 | KLD43862.1 | open | 371 [NA] | 124 [AA] | 1822->2192 | WU69_09075 | uracil phosphoribosyltransferase |
| 1592 | LBDH01000086.1 | KLD43806.1 | open | 648 [NA] | 215 [AA] | 178-825 | WU69_09080 | transcriptional regulator |
| 1593 | LBDH01000086.1 | KLD43807.1 | open | 549 [NA] | 182 [AA] | 803-1351 | WU69_09085 | DNA-binding protein |
| 1594 | LBDH01000086.1 | KLD43808.1 | open | 231 [NA] | 76 [AA] | 1351-1581 | WU69_09090 | copper-binding protein |
| 1595 | LBDH01000086.1 | KLD43809.1 | open | 744 [NA] | 247 [AA] | 1643->2388 | WU69_09095 | HAD family hydrolase |
| 1596 | LBDH01000087.1 | KLD43762.1 | open | 1350 [NA] | 449 [AA] | 127-1476 | WU69_09100 | pyridine nucleotide-disulfide oxidoreductase |
| 1597 | LBDH01000088.1 | KLD43707.1 | open | 351 [NA] | 116 [AA] | 219-569 | WU69_09105 | ManO family protein |
| 1598 | LBDH01000088.1 | KLD43708.1 | open | 921 [NA] | 306 [AA] | 570-1490 | WU69_09110 | PTS system mannose family transporter subunit IID |
| 1599 | LBDH01000088.1 | KLD43709.1 | open | 804 [NA] | 267 [AA] | 1519-2322 | WU69_09115 | PTS mannose transporter subunit IIC |
| 1600 | LBDH01000088.1 | KLD43710.1 | open | 984 [NA] | 327 [AA] | 2342-3325 | WU69_09120 | PTS system mannost-specific transporter subunits IIAB |
| 1601 | LBDH01000089.1 | KLD43669.1 | open | 225 [NA] | 74 [AA] | <1-227 | WU69_09125 | transposase |
| 1602 | LBDH01000089.1 | KLD43670.1 | open | 246 [NA] | 81 [AA] | 491-736 | WU69_09130 | molybdenum cofactor biosynthesis protein MoaD |
| 1603 | LBDH01000089.1 | KLD43671.1 | open | 339 [NA] | 112 [AA] | 2945-3283 | WU69_09145 | DNA methyltransferase |
| 1604 | LBDH01000089.1 | KLD43672.1 | open | 888 [NA] | 295 [AA] | 3298-4185 | WU69_09150 | XRE family transcriptional regulator |
| 1605 | LBDH01000089.1 | KLD43673.1 | open | 717 [NA] | 238 [AA] | 4274-4990 | WU69_09155 | ubiquinone biosynthesis methyltransferase UbiE |
| 1606 | LBDH01000090.1 | KLD43635.1 | open | 273 [NA] | 91 [AA] | <1-273 | WU69_09160 | pseudouridine synthase |
| 1607 | LBDH01000090.1 | KLD43636.1 | open | 921 [NA] | 306 [AA] | 366-1286 | WU69_09165 | cobalt transporter |
| 1608 | LBDH01000090.1 | KLD43637.1 | open | 555 [NA] | 184 [AA] | 2575->3130 | WU69_09175 | integrase |
| 1609 | LBDH01000091.1 | KLD43605.1 | open | 1332 [NA] | 443 [AA] | 1312-2643 | WU69_09185 | cation-binding protein |
| 1610 | LBDH01000091.1 | KLD43606.1 | open | 234 [NA] | 77 [AA] | 2633-2866 | WU69_09190 | hypothetical protein |
| 1611 | LBDH01000091.1 | KLD43607.1 | open | 318 [NA] | 105 [AA] | 2869-3186 | WU69_09195 | DNA methyltransferase |
| 1612 | LBDH01000091.1 | KLD43608.1 | open | 1224 [NA] | 407 [AA] | 3443-4666 | WU69_09200 | NADH dehydrogenase |
| 1613 | LBDH01000091.1 | KLD43609.1 | open | 410 [NA] | 136 [AA] | 5034->5443 | WU69_09205 | transposase |
| 1614 | LBDH01000091.1 | KLD43610.1 | open | 885 [NA] | 294 [AA] | 401-1285 | WU69_09180 | multidrug transporter |
| 1615 | LBDH01000092.1 | KLD43582.1 | open | 264 [NA] | 87 [AA] | 488-751 | WU69_09210 | addiction module protein |
| 1616 | LBDH01000092.1 | KLD43583.1 | open | 255 [NA] | 84 [AA] | 748-1002 | WU69_09215 | hypothetical protein |
| 1617 | LBDH01000092.1 | KLD43584.1 | open | 1464 [NA] | 487 [AA] | 1164-2627 | WU69_09220 | 6-phospho-beta-glucosidase |
| 1618 | LBDH01000093.1 | KLD43552.1 | open | 810 [NA] | 269 [AA] | 1293-2102 | WU69_09235 | hypothetical protein |
| 1619 | LBDH01000093.1 | KLD43553.1 | open | 396 [NA] | 131 [AA] | 2671-3066 | WU69_09240 | hypothetical protein |
| 1620 | LBDH01000093.1 | KLD43554.1 | open | 237 [NA] | 78 [AA] | 3740-3976 | WU69_09250 | hypothetical protein |