Genome Explorer: Gardnerella vaginalis UMB0742 (SEQF8013.1)
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Gardnerella vaginalis UMB0742 (SEQF8013.1)
NCBI Annotation for SEQF8013.1
| Genome selected: Gardnerella vaginalis UMB0742 | |||
| Contigs: | 1 | Bases: | 1472679 bps |
| CDS: | 10 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 1001 | JABUHE010000001.1 | NSX31665.1 | open | 654 [NA] | 217 [AA] | 1351377-1352030 | HRR09_05280 | thymidine phosphorylase |
| 1002 | JABUHE010000001.1 | NSX31666.1 | open | 639 [NA] | 212 [AA] | 1352322-1352960 | HRR09_05285 | uracil phosphoribosyltransferase |
| 1003 | JABUHE010000001.1 | NSX31667.1 | open | 798 [NA] | 265 [AA] | 1353087-1353884 | HRR09_05290 | glutamine amidotransferase |
| 1004 | JABUHE010000001.1 | NSX31668.1 | open | 1419 [NA] | 472 [AA] | 1353890-1355308 | HRR09_05295 | DUF1727 domain-containing protein |
| 1005 | JABUHE010000001.1 | NSX31669.1 | open | 1461 [NA] | 486 [AA] | 1355324-1356784 | HRR09_05300 | replicative DNA helicase |
| 1006 | JABUHE010000001.1 | NSX31670.1 | open | 1362 [NA] | 453 [AA] | 1356840-1358201 | HRR09_05305 | MATE family efflux transporter |
| 1007 | JABUHE010000001.1 | NSX31671.1 | open | 1782 [NA] | 593 [AA] | 1358621-1360402 | HRR09_05310 | ammonium transporter |
| 1008 | JABUHE010000001.1 | NSX31672.1 | open | 1182 [NA] | 393 [AA] | 1360565-1361746 | HRR09_05315 | signal recognition particle-docking protein FtsY |
| 1009 | JABUHE010000001.1 | NSX31673.1 | open | 261 [NA] | 86 [AA] | 1361934-1362194 | HRR09_05320 | NrdH-redoxin |
| 1010 | JABUHE010000001.1 | NSX31674.1 | open | 1416 [NA] | 471 [AA] | 1362492-1363907 | HRR09_05330 | DUF4032 domain-containing protein |
| 1011 | JABUHE010000001.1 | NSX31675.1 | open | 1128 [NA] | 375 [AA] | 1364158-1365285 | HRR09_05335 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC |
| 1012 | JABUHE010000001.1 | NSX31676.1 | open | 960 [NA] | 319 [AA] | 1365526-1366485 | HRR09_05340 | thioredoxin domain-containing protein |
| 1013 | JABUHE010000001.1 | NSX31677.1 | open | 963 [NA] | 320 [AA] | 1366581-1367543 | HRR09_05345 | thioredoxin domain-containing protein |
| 1014 | JABUHE010000001.1 | NSX31678.1 | open | 1839 [NA] | 612 [AA] | 1367676-1369514 | HRR09_05350 | serine/threonine protein kinase |
| 1015 | JABUHE010000001.1 | NSX31679.1 | open | 1461 [NA] | 486 [AA] | 1370206-1371666 | HRR09_05360 | G5 domain-containing protein |
| 1016 | JABUHE010000001.1 | NSX31680.1 | open | 897 [NA] | 298 [AA] | 1371722-1372618 | HRR09_05365 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA |
| 1017 | JABUHE010000001.1 | NSX31681.1 | open | 627 [NA] | 208 [AA] | 1372748-1373374 | HRR09_05370 | LytR C-terminal domain-containing protein |
| 1018 | JABUHE010000001.1 | NSX31682.1 | open | 1473 [NA] | 490 [AA] | 1373433-1374905 | HRR09_05375 | CCA tRNA nucleotidyltransferase |
| 1019 | JABUHE010000001.1 | NSX31683.1 | open | 777 [NA] | 258 [AA] | 1374948-1375724 | HRR09_05380 | NUDIX hydrolase |
| 1020 | JABUHE010000001.1 | NSX31684.1 | open | 2424 [NA] | 807 [AA] | 1375675-1378098 | HRR09_05385 | hypothetical protein |
| 1021 | JABUHE010000001.1 | NSX31685.1 | open | 1797 [NA] | 598 [AA] | 1378095-1379891 | HRR09_05390 | murein biosynthesis integral membrane protein MurJ |
| 1022 | JABUHE010000001.1 | NSX31686.1 | open | 2220 [NA] | 739 [AA] | 1380058-1382277 | HRR09_05395 | kinase |
| 1023 | JABUHE010000001.1 | NSX31687.1 | open | 942 [NA] | 313 [AA] | 1382313-1383254 | HRR09_05400 | thioredoxin-disulfide reductase |
| 1024 | JABUHE010000001.1 | NSX31688.1 | open | 423 [NA] | 140 [AA] | 1383405-1383827 | HRR09_05405 | hypothetical protein |
| 1025 | JABUHE010000001.1 | NSX31689.1 | open | 1359 [NA] | 452 [AA] | 1384439-1385797 | HRR09_05410 | ParB/RepB/Spo0J family partition protein |
| 1026 | JABUHE010000001.1 | NSX31690.1 | open | 972 [NA] | 323 [AA] | 1385797-1386768 | HRR09_05415 | ParA family protein |
| 1027 | JABUHE010000001.1 | NSX31691.1 | open | 711 [NA] | 236 [AA] | 1387602-1388312 | HRR09_05420 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG |
| 1028 | JABUHE010000001.1 | NSX31692.1 | open | 555 [NA] | 184 [AA] | 1388451-1389005 | HRR09_05425 | hypothetical protein |
| 1029 | JABUHE010000001.1 | NSX31693.1 | open | 1014 [NA] | 337 [AA] | 1389142-1390155 | HRR09_05430 | membrane protein insertase YidC |
| 1030 | JABUHE010000001.1 | NSX31694.1 | open | 321 [NA] | 106 [AA] | 1390155-1390475 | HRR09_05435 | membrane protein insertion efficiency factor YidD |
| 1031 | JABUHE010000001.1 | NSX31695.1 | open | 498 [NA] | 165 [AA] | 1390514-1391011 | HRR09_05440 | ribonuclease P protein component |
| 1032 | JABUHE010000001.1 | NSX31696.1 | open | 135 [NA] | 44 [AA] | 1391033-1391167 | HRR09_05445 | 50S ribosomal protein L34 |
| 1033 | JABUHE010000001.1 | NSX31697.1 | open | 1614 [NA] | 537 [AA] | 1391557-1393170 | HRR09_05450 | chromosomal replication initiator protein DnaA |
| 1034 | JABUHE010000001.1 | NSX31698.1 | open | 1125 [NA] | 374 [AA] | 1393600-1394724 | HRR09_05455 | DNA polymerase III subunit beta |
| 1035 | JABUHE010000001.1 | NSX31699.1 | open | 1302 [NA] | 433 [AA] | 1394823-1396124 | HRR09_05460 | DNA replication/repair protein RecF |
| 1036 | JABUHE010000001.1 | NSX31700.1 | open | 468 [NA] | 155 [AA] | 1396124-1396591 | HRR09_05465 | DUF721 domain-containing protein |
| 1037 | JABUHE010000001.1 | NSX31701.1 | open | 2076 [NA] | 691 [AA] | 1396773-1398848 | HRR09_05470 | DNA topoisomerase (ATP-hydrolyzing) subunit B |
| 1038 | JABUHE010000001.1 | NSX31702.1 | open | 2631 [NA] | 876 [AA] | 1398918-1401548 | HRR09_05475 | DNA gyrase subunit A |
| 1039 | JABUHE010000001.1 | NSX31703.1 | open | 666 [NA] | 221 [AA] | 1401698-1402363 | HRR09_05480 | DUF3566 domain-containing protein |
| 1040 | JABUHE010000001.1 | NSX31704.1 | open | 411 [NA] | 136 [AA] | 1402449-1402859 | HRR09_05485 | large conductance mechanosensitive channel protein MscL |
| 1041 | JABUHE010000001.1 | NSX31705.1 | open | 738 [NA] | 245 [AA] | 1402883-1403620 | HRR09_05490 | phosphatase PAP2 family protein |
| 1042 | JABUHE010000001.1 | NSX31706.1 | open | 702 [NA] | 233 [AA] | 1403776-1404477 | HRR09_05495 | DUF3662 domain-containing protein |
| 1043 | JABUHE010000001.1 | NSX31707.1 | open | 537 [NA] | 178 [AA] | 1404511-1405047 | HRR09_05500 | FHA domain-containing protein |
| 1044 | JABUHE010000001.1 | NSX31708.1 | open | 1665 [NA] | 554 [AA] | 1405051-1406715 | HRR09_05505 | protein phosphatase 2C domain-containing protein |
| 1045 | JABUHE010000001.1 | NSX31709.1 | open | 1482 [NA] | 493 [AA] | 1406712-1408193 | HRR09_05510 | FtsW/RodA/SpoVE family cell cycle protein |
| 1046 | JABUHE010000001.1 | NSX31710.1 | open | 1467 [NA] | 488 [AA] | 1408186-1409652 | HRR09_05515 | penicillin-binding protein 2 |
| 1047 | JABUHE010000001.1 | NSX31711.1 | open | 963 [NA] | 320 [AA] | 1409649-1410611 | HRR09_05520 | serine/threonine protein kinase |
| 1048 | JABUHE010000001.1 | NSX31712.1 | open | 2004 [NA] | 667 [AA] | 1410608-1412611 | HRR09_05525 | Stk1 family PASTA domain-containing Ser/Thr kinase |
| 1049 | JABUHE010000001.1 | NSX31713.1 | open | 1107 [NA] | 368 [AA] | 1413013-1414119 | HRR09_05530 | class E sortase |
| 1050 | JABUHE010000001.1 | NSX31714.1 | open | 756 [NA] | 251 [AA] | 1414165-1414920 | HRR09_05535 | DUF881 domain-containing protein |
| 1051 | JABUHE010000001.1 | NSX31715.1 | open | 393 [NA] | 130 [AA] | 1414998-1415390 | HRR09_05540 | cell division protein CrgA |
| 1052 | JABUHE010000001.1 | NSX31716.1 | open | 1317 [NA] | 438 [AA] | 1415447-1416763 | HRR09_05545 | SAM-dependent methyltransferase |
| 1053 | JABUHE010000001.1 | NSX31717.1 | open | 705 [NA] | 234 [AA] | 1417020-1417724 | HRR09_05550 | rhomboid family intramembrane serine protease |
| 1054 | JABUHE010000001.1 | NSX31718.1 | open | 210 [NA] | 69 [AA] | 1417886-1418095 | HRR09_05555 | hypothetical protein |
| 1055 | JABUHE010000001.1 | NSX31719.1 | open | 2490 [NA] | 829 [AA] | 1418296-1420785 | HRR09_05560 | glycogen/starch/alpha-glucan phosphorylase |
| 1056 | JABUHE010000001.1 | NSX31720.1 | open | 417 [NA] | 138 [AA] | 1421023-1421439 | HRR09_05565 | hypothetical protein |
| 1057 | JABUHE010000001.1 | NSX31721.1 | open | 381 [NA] | 126 [AA] | 1421558-1421938 | HRR09_05570 | DUF3073 domain-containing protein |
| 1058 | JABUHE010000001.1 | NSX31722.1 | open | 1092 [NA] | 363 [AA] | 1422084-1423175 | HRR09_05575 | tryptophan--tRNA ligase |
| 1059 | JABUHE010000001.1 | NSX31723.1 | open | 1722 [NA] | 573 [AA] | 1423274-1424995 | HRR09_05580 | threonine/serine exporter family protein |
| 1060 | JABUHE010000001.1 | NSX31724.1 | open | 2757 [NA] | 918 [AA] | 1425202-1427958 | HRR09_05585 | phosphoenolpyruvate carboxylase |
| 1061 | JABUHE010000001.1 | NSX31725.1 | open | 660 [NA] | 219 [AA] | 1428186-1428845 | HRR09_05590 | carbonate dehydratase |
| 1062 | JABUHE010000001.1 | NSX31726.1 | open | 1095 [NA] | 364 [AA] | 1428901-1429995 | HRR09_05595 | permease |
| 1063 | JABUHE010000001.1 | NSX31727.1 | open | 771 [NA] | 256 [AA] | 1429992-1430762 | HRR09_05600 | TIGR03943 family protein |
| 1064 | JABUHE010000001.1 | NSX31728.1 | open | 1296 [NA] | 431 [AA] | 1430839-1432134 | HRR09_05605 | HlyC/CorC family transporter |
| 1065 | JABUHE010000001.1 | NSX31729.1 | open | 480 [NA] | 159 [AA] | 1432192-1432671 | HRR09_05610 | DNA starvation/stationary phase protection protein |
| 1066 | JABUHE010000001.1 | NSX31730.1 | open | 2313 [NA] | 770 [AA] | 1433304-1435616 | HRR09_05625 | heavy metal translocating P-type ATPase |
| 1067 | JABUHE010000001.1 | NSX31731.1 | open | 1479 [NA] | 492 [AA] | 1435927-1437405 | HRR09_05630 | FAD-dependent oxidoreductase |
| 1068 | JABUHE010000001.1 | NSX31732.1 | open | 879 [NA] | 292 [AA] | 1437511-1438389 | HRR09_05635 | M48 family metalloprotease |
| 1069 | JABUHE010000001.1 | NSX31733.1 | open | 3045 [NA] | 1014 [AA] | 1438661-1441705 | HRR09_05645 | peptidase |
| 1070 | JABUHE010000001.1 | NSX31734.1 | open | 1179 [NA] | 392 [AA] | 1442051-1443229 | HRR09_05650 | DUF2974 domain-containing protein |
| 1071 | JABUHE010000001.1 | NSX31735.1 | open | 564 [NA] | 187 [AA] | 1443582-1444145 | HRR09_05655 | peroxiredoxin |
| 1072 | JABUHE010000001.1 | NSX31736.1 | open | 1674 [NA] | 557 [AA] | 1444272-1445945 | HRR09_05660 | alkyl hydroperoxide reductase subunit F |
| 1073 | JABUHE010000001.1 | NSX31737.1 | open | 903 [NA] | 300 [AA] | 1445987-1446889 | HRR09_05665 | LysR family transcriptional regulator |
| 1074 | JABUHE010000001.1 | NSX31738.1 | open | 1194 [NA] | 397 [AA] | 1447039-1448232 | HRR09_05670 | tryptophan synthase subunit beta |
| 1075 | JABUHE010000001.1 | NSX31739.1 | open | 582 [NA] | 193 [AA] | 1448803-1449384 | HRR09_05675 | dCTP deaminase |
| 1076 | JABUHE010000001.1 | NSX31740.1 | open | 2991 [NA] | 996 [AA] | 1449684-1452674 | HRR09_05680 | cation-translocating P-type ATPase |
| 1077 | JABUHE010000001.1 | NSX31741.1 | open | 999 [NA] | 332 [AA] | 1452903-1453901 | HRR09_05685 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB |
| 1078 | JABUHE010000001.1 | NSX31742.1 | open | 1764 [NA] | 587 [AA] | 1453898-1455661 | HRR09_05690 | ABC transporter ATP-binding protein |
| 1079 | JABUHE010000001.1 | NSX31743.1 | open | 1803 [NA] | 600 [AA] | 1455797-1457599 | HRR09_05695 | trypsin-like peptidase domain-containing protein |
| 1080 | JABUHE010000001.1 | NSX31744.1 | open | 1326 [NA] | 441 [AA] | 1457785-1459110 | HRR09_05700 | tRNA guanosine(34) transglycosylase Tgt |
| 1081 | JABUHE010000001.1 | NSX31745.1 | open | 771 [NA] | 256 [AA] | 1459445-1460215 | HRR09_05710 | esterase |
| 1082 | JABUHE010000001.1 | NSX31746.1 | open | 432 [NA] | 143 [AA] | 1460320-1460751 | HRR09_05715 | nucleoside deaminase |
| 1083 | JABUHE010000001.1 | NSX31747.1 | open | 1011 [NA] | 336 [AA] | 1461142-1462152 | HRR09_05720 | LacI family DNA-binding transcriptional regulator |
| 1084 | JABUHE010000001.1 | NSX31748.1 | open | 1494 [NA] | 497 [AA] | 1462369-1463862 | HRR09_05725 | sugar ABC transporter ATP-binding protein |
| 1085 | JABUHE010000001.1 | NSX31749.1 | open | 1002 [NA] | 333 [AA] | 1464034-1465035 | HRR09_05730 | ABC transporter permease |
| 1086 | JABUHE010000001.1 | NSX31750.1 | open | 942 [NA] | 313 [AA] | 1465297-1466238 | HRR09_05735 | D-ribose ABC transporter substrate-binding protein |
| 1087 | JABUHE010000001.1 | NSX31751.1 | open | 396 [NA] | 131 [AA] | 1466532-1466927 | HRR09_05740 | D-ribose pyranase |
| 1088 | JABUHE010000001.1 | NSX31752.1 | open | 1047 [NA] | 348 [AA] | 1466974-1468020 | HRR09_05745 | ribokinase |
| 1089 | JABUHE010000001.1 | NSX31753.1 | open | 969 [NA] | 322 [AA] | 1468263-1469231 | HRR09_05750 | ketopantoate reductase family protein |
| 1090 | JABUHE010000001.1 | NSX31754.1 | open | 1920 [NA] | 639 [AA] | 1469446-1471365 | HRR09_05755 | alpha-glucosidase |
| 1091 | JABUHE010000001.1 | NSX31755.1 | open | 771 [NA] | 256 [AA] | 1471391-1472161 | HRR09_05760 | NAD-dependent deacetylase |