Genome Explorer: Bifidobacterium dentium BIOML-A3 (SEQF7212.1)
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NCBI Annotation for SEQF7212.1
| Genome selected: Bifidobacterium dentium BIOML-A3 | |||
| Contigs: | 13 | Bases: | 2590214 bps |
| CDS: | 56 | rRNA: | 4 |
| tmRNA: | 1 | tRNA: | 53 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | WDPE01000008.1 | KAB7457787.1 | open | 3287 [NA] | 1096 [AA] | 45103->48389 | GBA94_10575 | hypothetical protein |
| 2002 | WDPE01000008.1 | KAB7457788.1 | open | 684 [NA] | 227 [AA] | 1120-1803 | GBA94_10345 | FadR family transcriptional regulator |
| 2003 | WDPE01000008.1 | KAB7457789.1 | open | 282 [NA] | 93 [AA] | 4026-4307 | GBA94_10365 | hypothetical protein |
| 2004 | WDPE01000008.1 | KAB7457790.1 | open | 1608 [NA] | 535 [AA] | 4735-6342 | GBA94_10375 | hypothetical protein |
| 2005 | WDPE01000008.1 | KAB7457791.1 | open | 918 [NA] | 305 [AA] | 35923-36840 | GBA94_10530 | hypothetical protein |
| 2006 | WDPE01000008.1 | KAB7457792.1 | open | 633 [NA] | 210 [AA] | 39624-40256 | GBA94_10550 | hypothetical protein |
| 2007 | WDPE01000009.1 | KAB7457272.1 | open | 732 [NA] | 243 [AA] | 1684-2415 | GBA94_10585 | aquaporin family protein |
| 2008 | WDPE01000009.1 | KAB7457273.1 | open | 882 [NA] | 293 [AA] | 2481-3362 | GBA94_10590 | DUF3152 domain-containing protein |
| 2009 | WDPE01000009.1 | KAB7457274.1 | open | 1026 [NA] | 341 [AA] | 3377-4402 | GBA94_10595 | glutamyl-Q tRNA(Asp) synthetase |
| 2010 | WDPE01000009.1 | KAB7457275.1 | open | 408 [NA] | 135 [AA] | 4687-5094 | GBA94_10600 | transposase |
| 2011 | WDPE01000009.1 | KAB7457276.1 | open | 843 [NA] | 280 [AA] | 5414-6256 | GBA94_10605 | YggS family pyridoxal phosphate-dependent enzyme |
| 2012 | WDPE01000009.1 | KAB7457277.1 | open | 1038 [NA] | 345 [AA] | 6364-7401 | GBA94_10610 | class C sortase |
| 2013 | WDPE01000009.1 | KAB7457278.1 | open | 3081 [NA] | 1026 [AA] | 7683-10763 | GBA94_10615 | VWA domain-containing protein |
| 2014 | WDPE01000009.1 | KAB7457279.1 | open | 1605 [NA] | 534 [AA] | 10912-12516 | GBA94_10620 | isopeptide-forming domain-containing fimbrial protein |
| 2015 | WDPE01000009.1 | KAB7457280.1 | open | 525 [NA] | 174 [AA] | 12976-13500 | GBA94_10625 | hypothetical protein |
| 2016 | WDPE01000009.1 | KAB7457281.1 | open | 822 [NA] | 273 [AA] | 13521-14342 | GBA94_10630 | fumarylacetoacetate hydrolase family protein |
| 2017 | WDPE01000009.1 | KAB7457282.1 | open | 2637 [NA] | 878 [AA] | 14613-17249 | GBA94_10635 | ATP-dependent chaperone ClpB |
| 2018 | WDPE01000009.1 | KAB7457283.1 | open | 990 [NA] | 329 [AA] | 17336-18325 | GBA94_10640 | ATPase P |
| 2019 | WDPE01000009.1 | KAB7457284.1 | open | 1344 [NA] | 447 [AA] | 18483-19826 | GBA94_10645 | DNA recombination protein RmuC |
| 2020 | WDPE01000009.1 | KAB7457285.1 | open | 663 [NA] | 220 [AA] | 19852-20514 | GBA94_10650 | orotate phosphoribosyltransferase |
| 2021 | WDPE01000009.1 | KAB7457286.1 | open | 963 [NA] | 320 [AA] | 20603-21565 | GBA94_10655 | RNA methyltransferase |
| 2022 | WDPE01000009.1 | KAB7457287.1 | open | 618 [NA] | 205 [AA] | 23049-23666 | GBA94_10670 | hypothetical protein |
| 2023 | WDPE01000009.1 | KAB7457288.1 | open | 297 [NA] | 98 [AA] | 24192-24488 | GBA94_10675 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC |
| 2024 | WDPE01000009.1 | KAB7457289.1 | open | 1536 [NA] | 511 [AA] | 24490-26025 | GBA94_10680 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA |
| 2025 | WDPE01000009.1 | KAB7457290.1 | open | 1497 [NA] | 498 [AA] | 26051-27547 | GBA94_10685 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB |
| 2026 | WDPE01000009.1 | KAB7457291.1 | open | 1074 [NA] | 357 [AA] | 27792-28865 | GBA94_10690 | GNAT family N-acetyltransferase |
| 2027 | WDPE01000009.1 | KAB7457292.1 | open | 315 [NA] | 104 [AA] | 28865-29179 | GBA94_10695 | DUF2469 family protein |
| 2028 | WDPE01000009.1 | KAB7457293.1 | open | 1932 [NA] | 643 [AA] | 29341-31272 | GBA94_10700 | histidine-type phosphatase |
| 2029 | WDPE01000009.1 | KAB7457294.1 | open | 1590 [NA] | 529 [AA] | 31476-33065 | GBA94_10705 | NAD(P)/FAD-dependent oxidoreductase |
| 2030 | WDPE01000009.1 | KAB7457295.1 | open | 477 [NA] | 158 [AA] | 35780-36256 | GBA94_10715 | winged helix-turn-helix transcriptional regulator |
| 2031 | WDPE01000009.1 | KAB7457296.1 | open | 414 [NA] | 137 [AA] | 36273-36686 | GBA94_10720 | chorismate mutase |
| 2032 | WDPE01000009.1 | KAB7457297.1 | open | 2064 [NA] | 687 [AA] | 36788-38851 | GBA94_10725 | hypothetical protein |
| 2033 | WDPE01000009.1 | KAB7457298.1 | open | 2790 [NA] | 929 [AA] | 38909-41698 | GBA94_10730 | valine--tRNA ligase |
| 2034 | WDPE01000009.1 | KAB7457299.1 | open | 666 [NA] | 221 [AA] | 43377-44042 | GBA94_10740 | endonuclease III |
| 2035 | WDPE01000009.1 | KAB7457300.1 | open | 762 [NA] | 253 [AA] | 44091-44852 | GBA94_10745 | response regulator transcription factor |
| 2036 | WDPE01000009.1 | KAB7457301.1 | open | 762 [NA] | 253 [AA] | 45003-45764 | GBA94_10750 | hypothetical protein |
| 2037 | WDPE01000009.1 | KAB7457302.1 | open | 1027 [NA] | 342 [AA] | <1-1027 | GBA94_10580 | thioester-forming surface-anchored protein |
| 2038 | WDPE01000009.1 | KAB7457303.1 | open | 2091 [NA] | 696 [AA] | 33257-35347 | GBA94_10710 | transcription termination factor Rho |
| 2039 | WDPE01000009.1 | KAB7457304.1 | open | 1545 [NA] | 514 [AA] | 41780-43324 | GBA94_10735 | ABC transporter substrate-binding protein |
| 2040 | WDPE01000010.1 | KAB7457226.1 | open | 1248 [NA] | 415 [AA] | 2117-3364 | GBA94_10760 | N-acetylglucosamine-6-phosphate deacetylase |
| 2041 | WDPE01000010.1 | KAB7457227.1 | open | 813 [NA] | 270 [AA] | 3382-4194 | GBA94_10765 | glucosamine-6-phosphate deaminase |
| 2042 | WDPE01000010.1 | KAB7457228.1 | open | 960 [NA] | 319 [AA] | 4270-5229 | GBA94_10770 | dihydrodipicolinate synthase family protein |
| 2043 | WDPE01000010.1 | KAB7457229.1 | open | 852 [NA] | 283 [AA] | 5274-6125 | GBA94_10775 | ABC transporter ATP-binding protein |
| 2044 | WDPE01000010.1 | KAB7457230.1 | open | 288 [NA] | 95 [AA] | 6616-6903 | GBA94_10785 | helix-turn-helix transcriptional regulator |
| 2045 | WDPE01000010.1 | KAB7457231.1 | open | 246 [NA] | 81 [AA] | 6989-7234 | GBA94_10790 | helix-turn-helix transcriptional regulator |
| 2046 | WDPE01000010.1 | KAB7457232.1 | open | 474 [NA] | 157 [AA] | 8068-8541 | GBA94_10800 | hypothetical protein |
| 2047 | WDPE01000010.1 | KAB7457233.1 | open | 870 [NA] | 289 [AA] | 10128-10997 | GBA94_10815 | type IV secretion system protein |
| 2048 | WDPE01000010.1 | KAB7457234.1 | open | 393 [NA] | 130 [AA] | 11016-11408 | GBA94_10820 | PrgI family protein |
| 2049 | WDPE01000010.1 | KAB7457235.1 | open | 1635 [NA] | 544 [AA] | 13878-15512 | GBA94_10830 | CHAP domain-containing protein |
| 2050 | WDPE01000010.1 | KAB7457236.1 | open | 1224 [NA] | 407 [AA] | 16255-17478 | GBA94_10840 | alpha/beta hydrolase |
| 2051 | WDPE01000010.1 | KAB7457237.1 | open | 582 [NA] | 193 [AA] | 17761-18342 | GBA94_10845 | NAD(P)H-dependent oxidoreductase |
| 2052 | WDPE01000010.1 | KAB7457238.1 | open | 1686 [NA] | 561 [AA] | 18501-20186 | GBA94_10850 | TraM recognition domain-containing protein |
| 2053 | WDPE01000010.1 | KAB7457239.1 | open | 360 [NA] | 119 [AA] | 20173-20532 | GBA94_10855 | hypothetical protein |
| 2054 | WDPE01000010.1 | KAB7457240.1 | open | 1473 [NA] | 490 [AA] | 21907-23379 | GBA94_10870 | relaxase/mobilization nuclease domain-containing protein |
| 2055 | WDPE01000010.1 | KAB7457241.1 | open | 396 [NA] | 131 [AA] | 23382-23777 | GBA94_10875 | MobC family plasmid mobilization relaxosome protein |
| 2056 | WDPE01000010.1 | KAB7457242.1 | open | 639 [NA] | 212 [AA] | 24191-24829 | GBA94_10880 | hypothetical protein |
| 2057 | WDPE01000010.1 | KAB7457243.1 | open | 423 [NA] | 140 [AA] | 24873-25295 | GBA94_10885 | hypothetical protein |
| 2058 | WDPE01000010.1 | KAB7457244.1 | open | 423 [NA] | 140 [AA] | 25327-25749 | GBA94_10890 | hypothetical protein |
| 2059 | WDPE01000010.1 | KAB7457245.1 | open | 570 [NA] | 189 [AA] | 26356-26925 | GBA94_10895 | recombinase family protein |
| 2060 | WDPE01000010.1 | KAB7457246.1 | open | 960 [NA] | 319 [AA] | 26941-27900 | GBA94_10900 | tyrosine-type recombinase/integrase |
| 2061 | WDPE01000010.1 | KAB7457247.1 | open | 219 [NA] | 72 [AA] | 27975-28193 | GBA94_10905 | hypothetical protein |
| 2062 | WDPE01000010.1 | KAB7457248.1 | open | 1311 [NA] | 436 [AA] | 29342-30652 | GBA94_10915 | formyl-CoA transferase |
| 2063 | WDPE01000010.1 | KAB7457249.1 | open | 1077 [NA] | 358 [AA] | 30905-31981 | GBA94_10920 | permease |
| 2064 | WDPE01000010.1 | KAB7457250.1 | open | 1770 [NA] | 589 [AA] | 32066-33835 | GBA94_10925 | oxalyl-CoA decarboxylase |
| 2065 | WDPE01000010.1 | KAB7457251.1 | open | 1833 [NA] | 610 [AA] | 34030-35862 | GBA94_10930 | peptidase |
| 2066 | WDPE01000010.1 | KAB7457252.1 | open | 168 [NA] | 55 [AA] | 35916-36083 | GBA94_10935 | AraC family transcriptional regulator |
| 2067 | WDPE01000010.1 | KAB7457253.1 | open | 2196 [NA] | 731 [AA] | 36132-38327 | GBA94_10940 | DUF3416 domain-containing protein |
| 2068 | WDPE01000010.1 | KAB7457254.1 | open | 495 [NA] | 164 [AA] | 38544-39038 | GBA94_10945 | inorganic diphosphatase |
| 2069 | WDPE01000010.1 | KAB7457255.1 | open | 570 [NA] | 189 [AA] | 39770-40339 | GBA94_10950 | manganese efflux pump |
| 2070 | WDPE01000010.1 | KAB7457256.1 | open | 435 [NA] | 144 [AA] | 8671-9105 | GBA94_10805 | WhiB family transcriptional regulator |
| 2071 | WDPE01000010.1 | KAB7457257.1 | open | 252 [NA] | 83 [AA] | 9858-10109 | GBA94_10810 | permease |
| 2072 | WDPE01000010.1 | KAB7457258.1 | open | 2334 [NA] | 777 [AA] | 11545-13878 | GBA94_10825 | DUF87 domain-containing protein |
| 2073 | WDPE01000010.1 | KAB7457259.1 | open | 438 [NA] | 145 [AA] | 15801-16238 | GBA94_10835 | O-GlcNAc transferase |
| 2074 | WDPE01000010.1 | KAB7457260.1 | open | 330 [NA] | 109 [AA] | 20529-20858 | GBA94_10860 | spermidine/putrescine ABC transporter permease |
| 2075 | WDPE01000010.1 | KAB7457261.1 | open | 741 [NA] | 246 [AA] | 20880-21620 | GBA94_10865 | DUF3801 domain-containing protein |
| 2076 | WDPE01000010.1 | KAB7457262.1 | open | 579 [NA] | 192 [AA] | 28197-28775 | GBA94_10910 | ParA family protein |
| 2077 | WDPE01000011.1 | KAB7457191.1 | open | 765 [NA] | 254 [AA] | 138-902 | GBA94_10955 | NAD-dependent deacetylase |
| 2078 | WDPE01000011.1 | KAB7457192.1 | open | 1266 [NA] | 421 [AA] | 1231-2496 | GBA94_10960 | threonine ammonia-lyase |
| 2079 | WDPE01000011.1 | KAB7457193.1 | open | 1821 [NA] | 606 [AA] | 2665-4485 | GBA94_10965 | alpha-glucosidase |
| 2080 | WDPE01000011.1 | KAB7457194.1 | open | 876 [NA] | 291 [AA] | 5232-6107 | GBA94_10975 | carbohydrate ABC transporter permease |
| 2081 | WDPE01000011.1 | KAB7457195.1 | open | 915 [NA] | 304 [AA] | 6128-7042 | GBA94_10980 | sugar ABC transporter permease |
| 2082 | WDPE01000011.1 | KAB7457196.1 | open | 1293 [NA] | 430 [AA] | 7057-8349 | GBA94_10985 | carbohydrate ABC transporter substrate-binding protein |
| 2083 | WDPE01000011.1 | KAB7457197.1 | open | 1203 [NA] | 400 [AA] | 8532-9734 | GBA94_10990 | ROK family protein |
| 2084 | WDPE01000011.1 | KAB7457198.1 | open | 2295 [NA] | 764 [AA] | 10183-12477 | GBA94_10995 | alpha-galactosidase |
| 2085 | WDPE01000011.1 | KAB7457199.1 | open | 456 [NA] | 151 [AA] | 12635-13090 | GBA94_11000 | nucleoside deaminase |
| 2086 | WDPE01000011.1 | KAB7457200.1 | open | 2073 [NA] | 690 [AA] | 13172-15244 | GBA94_11005 | Na+/H+ antiporter |
| 2087 | WDPE01000011.1 | KAB7457201.1 | open | 186 [NA] | 61 [AA] | 15349-15534 | GBA94_11010 | hypothetical protein |
| 2088 | WDPE01000011.1 | KAB7457202.1 | open | 759 [NA] | 252 [AA] | 15533-16291 | GBA94_11015 | esterase |
| 2089 | WDPE01000011.1 | KAB7457203.1 | open | 582 [NA] | 193 [AA] | 16402-16983 | GBA94_11020 | dCTP deaminase |
| 2090 | WDPE01000011.1 | KAB7457204.1 | open | 2991 [NA] | 996 [AA] | 17137-20127 | GBA94_11025 | cation-translocating P-type ATPase |
| 2091 | WDPE01000011.1 | KAB7457205.1 | open | 846 [NA] | 281 [AA] | 20757-21602 | GBA94_11030 | IS3 family transposase |
| 2092 | WDPE01000011.1 | KAB7457206.1 | open | 561 [NA] | 186 [AA] | 21563-22123 | GBA94_11035 | IS3 family transposase |
| 2093 | WDPE01000012.1 | KAB7457031.1 | open | 1191 [NA] | 396 [AA] | 598-1788 | GBA94_11040 | histidine kinase |
| 2094 | WDPE01000012.1 | KAB7457032.1 | open | 672 [NA] | 223 [AA] | 1758-2429 | GBA94_11045 | response regulator transcription factor |
| 2095 | WDPE01000012.1 | KAB7457033.1 | open | 711 [NA] | 236 [AA] | 2718-3428 | GBA94_11050 | ABC transporter ATP-binding protein |
| 2096 | WDPE01000012.1 | KAB7457034.1 | open | 1446 [NA] | 481 [AA] | 3425-4870 | GBA94_11055 | hypothetical protein |
| 2097 | WDPE01000012.1 | KAB7457035.1 | open | 291 [NA] | 96 [AA] | 4857-5147 | GBA94_11060 | hypothetical protein |
| 2098 | WDPE01000013.1 | KAB7457025.1 | open | 900 [NA] | 299 [AA] | 2061->2961 | GBA94_11080 | isopeptide-forming domain-containing fimbrial protein |
| 2099 | WDPE01000013.1 | KAB7457026.1 | open | 942 [NA] | 313 [AA] | 989-1930 | GBA94_11075 | class C sortase |
| 2100 | WDPE01000013.1 | KAB7457027.1 | open | 1001 [NA] | 334 [AA] | <1-1001 | GBA94_11070 | Cna B-type domain-containing protein |