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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Delftia acidovorans JUb8 (SEQF5865.1)
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NCBI Annotation for SEQF5865.1
Genome selected: Delftia acidovorans JUb8
Contigs:18 Bases:6347590 bps
CDS:17 rRNA:5
tmRNA:1 tRNA:73
Annotation Table [page:12]
Number of Records Found: 5630 [12 Pages]
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# Molecule PID Genome
Viewer		 NA (Length)(Seq)
 AA (Length)(Seq)
 Range Gene Gene Product
5501 RJUY01000011.1 ROQ89222.1 open 417 [NA] 138 [AA] 90526-90942 EDF72_5612 phenylpyruvate tautomerase PptA (4-oxalocrotonate tautomerase family)
5502 RJUY01000011.1 ROQ89223.1 open 990 [NA] 329 [AA] 90953-91942 EDF72_5613 tripartite-type tricarboxylate transporter receptor subunit TctC
5503 RJUY01000011.1 ROQ89224.1 open 2214 [NA] 737 [AA] 92185-94398 EDF72_5614 rhodanese-related sulfurtransferase
5504 RJUY01000012.1 ROQ88671.1 open 4671 [NA] 1556 [AA] <1-4671 EDF72_5615 amino acid adenylation domain-containing protein
5505 RJUY01000012.1 ROQ88672.1 open 2397 [NA] 798 [AA] 4891-7287 EDF72_5616 iron complex outermembrane receptor protein
5506 RJUY01000012.1 ROQ88673.1 open 1035 [NA] 344 [AA] 7364-8398 EDF72_5617 FecR family protein
5507 RJUY01000012.1 ROQ88674.1 open 600 [NA] 199 [AA] 8411-9010 EDF72_5618 RNA polymerase sigma-70 factor (ECF subfamily)
5508 RJUY01000012.1 ROQ88675.1 open 1299 [NA] 432 [AA] 9225-10523 EDF72_5619 L-ornithine N5-oxygenase
5509 RJUY01000012.1 ROQ88676.1 open 1203 [NA] 400 [AA] 10535-11737 EDF72_5620 RimJ/RimL family protein N-acetyltransferase
5510 RJUY01000012.1 ROQ88677.1 open 966 [NA] 321 [AA] 11782-12747 EDF72_5621 acetyl esterase
5511 RJUY01000012.1 ROQ88678.1 open 1716 [NA] 571 [AA] 12993-14708 EDF72_5622 putative ATP-binding cassette transporter
5512 RJUY01000012.1 ROQ88679.1 open 843 [NA] 280 [AA] 14730-15572 EDF72_5623 hypothetical protein
5513 RJUY01000012.1 ROQ88680.1 open 759 [NA] 252 [AA] 15726-16484 EDF72_5624 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)
5514 RJUY01000012.1 ROQ88681.1 open 1047 [NA] 348 [AA] 16616-17662 EDF72_5625 iron(III) transport system substrate-binding protein
5515 RJUY01000012.1 ROQ88682.1 open 549 [NA] 182 [AA] 17964-18512 EDF72_5626 phasin family protein
5516 RJUY01000012.1 ROQ88683.1 open 462 [NA] 153 [AA] 18836-19297 EDF72_5627 acyl-CoA thioester hydrolase
5517 RJUY01000012.1 ROQ88684.1 open 1221 [NA] 406 [AA] 19413-20633 EDF72_5628 nicotinate phosphoribosyltransferase
5518 RJUY01000012.1 ROQ88685.1 open 1428 [NA] 475 [AA] 20695-22122 EDF72_5629 UIT6 family transporter
5519 RJUY01000012.1 ROQ88686.1 open 1008 [NA] 335 [AA] 22160-23167 EDF72_5630 gluconate 2-dehydrogenase
5520 RJUY01000012.1 ROQ88687.1 open 1491 [NA] 496 [AA] 23278-24768 EDF72_5631 DNA recombination protein RmuC
5521 RJUY01000012.1 ROQ88688.1 open 1182 [NA] 393 [AA] 24770-25951 EDF72_5632 putative MFS family arabinose efflux permease
5522 RJUY01000012.1 ROQ88689.1 open 870 [NA] 289 [AA] 26021-26890 EDF72_5633 hypothetical protein
5523 RJUY01000012.1 ROQ88690.1 open 384 [NA] 127 [AA] 27134-27517 EDF72_5634 multisubunit potassium/proton antiporter PhaG subunit
5524 RJUY01000012.1 ROQ88691.1 open 279 [NA] 92 [AA] 27514-27792 EDF72_5635 multisubunit potassium/proton antiporter PhaF subunit
5525 RJUY01000012.1 ROQ88692.1 open 492 [NA] 163 [AA] 27789-28280 EDF72_5636 multisubunit potassium/proton antiporter PhaE subunit
5526 RJUY01000012.1 ROQ88693.1 open 1797 [NA] 598 [AA] 28277-30073 EDF72_5637 multisubunit potassium/proton antiporter PhaD subunit
5527 RJUY01000012.1 ROQ88694.1 open 366 [NA] 121 [AA] 30070-30435 EDF72_5638 multisubunit potassium/proton antiporter PhaC subunit
5528 RJUY01000012.1 ROQ88695.1 open 2979 [NA] 992 [AA] 30435-33413 EDF72_5639 multisubunit potassium/proton antiporter PhaA subunit /multisubunit potassium/proton antiporter PhaB subunit
5529 RJUY01000012.1 ROQ88696.1 open 402 [NA] 133 [AA] 33553-33954 EDF72_5640 competence protein ComEA
5530 RJUY01000012.1 ROQ88697.1 open 93 [NA] 30 [AA] 34120-34212 EDF72_5641 hypothetical protein
5531 RJUY01000012.1 ROQ88698.1 open 1176 [NA] 391 [AA] 34212-35387 EDF72_5642 lipopolysaccharide biosynthesis regulator YciM
5532 RJUY01000012.1 ROQ88699.1 open 321 [NA] 106 [AA] 35377-35697 EDF72_5643 putative integral membrane protein
5533 RJUY01000012.1 ROQ88700.1 open 342 [NA] 113 [AA] 35778-36119 EDF72_5644 integration host factor subunit beta
5534 RJUY01000012.1 ROQ88701.1 open 1686 [NA] 561 [AA] 36210-37895 EDF72_5645 SSU ribosomal protein S1P
5535 RJUY01000012.1 ROQ88702.1 open 2028 [NA] 675 [AA] 38081-40108 EDF72_5646 3-phosphoshikimate 1-carboxyvinyltransferase
5536 RJUY01000012.1 ROQ88703.1 open 879 [NA] 292 [AA] 40223-41101 EDF72_5647 prephenate dehydrogenase
5537 RJUY01000012.1 ROQ88704.1 open 1101 [NA] 366 [AA] 41101-42201 EDF72_5648 chorismate mutase
5538 RJUY01000012.1 ROQ88705.1 open 1110 [NA] 369 [AA] 42221-43330 EDF72_5649 phosphoserine aminotransferase
5539 RJUY01000012.1 ROQ88706.1 open 2667 [NA] 888 [AA] 43454-46120 EDF72_5650 DNA gyrase subunit A
5540 RJUY01000012.1 ROQ88707.1 open 660 [NA] 219 [AA] 46350-47009 EDF72_5651 OOP family OmpA-OmpF porin
5541 RJUY01000012.1 ROQ88708.1 open 723 [NA] 240 [AA] 47094-47816 EDF72_5652 3-demethylubiquinone-9 3-methyltransferase
5542 RJUY01000012.1 ROQ88709.1 open 666 [NA] 221 [AA] 47822-48487 EDF72_5653 phosphoglycolate phosphatase
5543 RJUY01000012.1 ROQ88710.1 open 219 [NA] 72 [AA] 49020-49238 EDF72_5655 hypothetical protein
5544 RJUY01000012.1 ROQ88711.1 open 306 [NA] 101 [AA] 49336-49641 EDF72_5656 DNA-binding protein H-NS
5545 RJUY01000012.1 ROQ88712.1 open 3855 [NA] 1284 [AA] 50063-53917 EDF72_5657 hypothetical protein
5546 RJUY01000012.1 ROQ88713.1 open 327 [NA] 108 [AA] 54899-55225 EDF72_5658 tetratricopeptide repeat protein
5547 RJUY01000012.1 ROQ88714.1 open 465 [NA] 154 [AA] 55275-55739 EDF72_5659 ribonuclease HI
5548 RJUY01000012.1 ROQ88715.1 open 624 [NA] 207 [AA] 55841-56464 EDF72_5660 glutathione S-transferase
5549 RJUY01000012.1 ROQ88716.1 open 435 [NA] 144 [AA] 56536-56970 EDF72_5661 putative lipoprotein
5550 RJUY01000012.1 ROQ88717.1 open 1029 [NA] 342 [AA] 57384-58412 EDF72_5662 site-specific recombinase XerD
5551 RJUY01000012.1 ROQ88718.1 open 231 [NA] 76 [AA] 58409-58639 EDF72_5663 uncharacterized protein DUF4224
5552 RJUY01000012.1 ROQ88719.1 open 147 [NA] 48 [AA] 58709->58855 EDF72_5664 hypothetical protein
5553 RJUY01000013.1 ROQ88603.1 open 1425 [NA] 474 [AA] <1-1425 EDF72_5665 aconitate hydratase 1
5554 RJUY01000013.1 ROQ88604.1 open 1197 [NA] 398 [AA] 1425-2621 EDF72_5666 2-methylaconitate cis-trans isomerase
5555 RJUY01000013.1 ROQ88605.1 open 933 [NA] 310 [AA] 2656-3588 EDF72_5667 L-serine ammonia-lyase
5556 RJUY01000013.1 ROQ88606.1 open 939 [NA] 312 [AA] 3656-4594 EDF72_5668 DNA-binding transcriptional LysR family regulator
5557 RJUY01000013.1 ROQ88607.1 open 504 [NA] 167 [AA] 4704-5207 EDF72_5669 ribosomal-protein-alanine N-acetyltransferase
5558 RJUY01000013.1 ROQ88608.1 open 1038 [NA] 345 [AA] 5242-6279 EDF72_5670 hypothetical protein
5559 RJUY01000013.1 ROQ88609.1 open 861 [NA] 286 [AA] 6602-7462 EDF72_5671 hypothetical protein
5560 RJUY01000013.1 ROQ88610.1 open 2046 [NA] 681 [AA] 7472-9517 EDF72_5672 propionate catabolism operon transcriptional regulator
5561 RJUY01000013.1 ROQ88611.1 open 996 [NA] 331 [AA] 9694-10689 EDF72_5673 tripartite-type tricarboxylate transporter receptor subunit TctC
5562 RJUY01000013.1 ROQ88612.1 open 1011 [NA] 336 [AA] 10734-11744 EDF72_5674 tripartite-type tricarboxylate transporter receptor subunit TctC
5563 RJUY01000013.1 ROQ88613.1 open 861 [NA] 286 [AA] 11789-12649 EDF72_5675 2-methylisocitrate lyase-like PEP mutase family enzyme
5564 RJUY01000013.1 ROQ88614.1 open 597 [NA] 198 [AA] 12694-13290 EDF72_5676 TetR family transcriptional regulator
5565 RJUY01000013.1 ROQ88615.1 open 1221 [NA] 406 [AA] 13413-14633 EDF72_5677 putative MFS family arabinose efflux permease
5566 RJUY01000013.1 ROQ88616.1 open 882 [NA] 293 [AA] 14677-15558 EDF72_5678 DNA-binding transcriptional LysR family regulator
5567 RJUY01000013.1 ROQ88617.1 open 1545 [NA] 514 [AA] 15673-17217 EDF72_5679 DHA2 family multidrug resistance protein-like MFS transporter
5568 RJUY01000013.1 ROQ88618.1 open 582 [NA] 193 [AA] 17310-17891 EDF72_5680 Fe-Mn family superoxide dismutase
5569 RJUY01000013.1 ROQ88619.1 open 1338 [NA] 445 [AA] 18210-19547 EDF72_5681 exodeoxyribonuclease VII large subunit
5570 RJUY01000013.1 ROQ88620.1 open 633 [NA] 210 [AA] 19943-20575 EDF72_5682 biopolymer transport protein ExbB
5571 RJUY01000013.1 ROQ88621.1 open 426 [NA] 141 [AA] 20607-21032 EDF72_5683 biopolymer transport protein ExbD
5572 RJUY01000013.1 ROQ88622.1 open 1017 [NA] 338 [AA] 21046-22062 EDF72_5684 lipid-A-disaccharide kinase
5573 RJUY01000013.1 ROQ88623.1 open 183 [NA] 60 [AA] 22127-22309 EDF72_5685 hypothetical protein
5574 RJUY01000013.1 ROQ88624.1 open 792 [NA] 263 [AA] 22377-23168 EDF72_5686 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
5575 RJUY01000013.1 ROQ88625.1 open 657 [NA] 218 [AA] 23433-24089 EDF72_5687 adenylate kinase
5576 RJUY01000013.1 ROQ88626.1 open 990 [NA] 329 [AA] 24182-25171 EDF72_5688 L-asparaginase
5577 RJUY01000013.1 ROQ88627.1 open 675 [NA] 224 [AA] 25270-25944 EDF72_5689 SOS-response transcriptional repressor LexA
5578 RJUY01000013.1 ROQ88628.1 open 423 [NA] 140 [AA] 26107-26529 EDF72_5690 hypothetical protein
5579 RJUY01000013.1 ROQ88629.1 open 972 [NA] 323 [AA] 27268-28239 EDF72_5692 FecR family protein
5580 RJUY01000013.1 ROQ88630.1 open 558 [NA] 185 [AA] 28287-28844 EDF72_5693 putative kinase
5581 RJUY01000013.1 ROQ88631.1 open 387 [NA] 128 [AA] 29023-29409 EDF72_5695 camphor resistance protein CrcB
5582 RJUY01000013.1 ROQ88632.1 open 204 [NA] 67 [AA] 29667-29870 EDF72_5697 hypothetical protein
5583 RJUY01000013.1 ROQ88633.1 open 309 [NA] 102 [AA] 30200-30508 EDF72_5698 hypothetical protein
5584 RJUY01000013.1 ROQ88634.1 open 861 [NA] 286 [AA] 32417-33276 EDF72_5700 DNA adenine methylase
5585 RJUY01000013.1 ROQ88635.1 open 639 [NA] 212 [AA] 33658-34296 EDF72_5701 hypothetical protein
5586 RJUY01000013.1 ROQ88636.1 open 579 [NA] 193 [AA] 34471->35049 EDF72_5702 C-5 cytosine-specific DNA methylase
5587 RJUY01000014.1 ROQ88553.1 open 111 [NA] 36 [AA] <1-111 EDF72_5703 elongation factor Tu-like protein
5588 RJUY01000014.1 ROQ88554.1 open 312 [NA] 103 [AA] 136-447 EDF72_5704 SSU ribosomal protein S10P
5589 RJUY01000014.1 ROQ88555.1 open 675 [NA] 224 [AA] 658-1332 EDF72_5705 LSU ribosomal protein L3P
5590 RJUY01000014.1 ROQ88556.1 open 621 [NA] 206 [AA] 1332-1952 EDF72_5706 large subunit ribosomal protein L4
5591 RJUY01000014.1 ROQ88557.1 open 315 [NA] 104 [AA] 1949-2263 EDF72_5707 LSU ribosomal protein L23P
5592 RJUY01000014.1 ROQ88558.1 open 825 [NA] 274 [AA] 2266-3090 EDF72_5708 LSU ribosomal protein L2P
5593 RJUY01000014.1 ROQ88559.1 open 276 [NA] 91 [AA] 3101-3376 EDF72_5709 SSU ribosomal protein S19P
5594 RJUY01000014.1 ROQ88560.1 open 333 [NA] 110 [AA] 3387-3719 EDF72_5710 LSU ribosomal protein L22P
5595 RJUY01000014.1 ROQ88561.1 open 873 [NA] 290 [AA] 3736-4608 EDF72_5711 SSU ribosomal protein S3P
5596 RJUY01000014.1 ROQ88562.1 open 417 [NA] 138 [AA] 4611-5027 EDF72_5712 LSU ribosomal protein L16P
5597 RJUY01000014.1 ROQ88563.1 open 198 [NA] 65 [AA] 5038-5235 EDF72_5713 LSU ribosomal protein L29P
5598 RJUY01000014.1 ROQ88564.1 open 270 [NA] 89 [AA] 5249-5518 EDF72_5714 small subunit ribosomal protein S17
5599 RJUY01000014.1 ROQ88565.1 open 507 [NA] 168 [AA] 5637-6143 EDF72_5715 peroxiredoxin
5600 RJUY01000014.1 ROQ88566.1 open 444 [NA] 147 [AA] 6256-6699 EDF72_5716 ribosomal protein S18 acetylase RimI-like enzyme
5601 RJUY01000014.1 ROQ88567.1 open 729 [NA] 242 [AA] 6813-7541 EDF72_5717 cytochrome b
5602 RJUY01000014.1 ROQ88568.1 open 477 [NA] 158 [AA] 8188-8664 EDF72_5719 peroxiredoxin
5603 RJUY01000014.1 ROQ88569.1 open 609 [NA] 202 [AA] 8824-9432 EDF72_5720 hypothetical protein
5604 RJUY01000014.1 ROQ88570.1 open 540 [NA] 179 [AA] 9480-10019 EDF72_5721 PTS system ascorbate-specific IIA component
5605 RJUY01000014.1 ROQ88571.1 open 270 [NA] 89 [AA] 9988-10257 EDF72_5722 phosphocarrier protein
5606 RJUY01000014.1 ROQ88572.1 open 1776 [NA] 591 [AA] 10375-12150 EDF72_5723 phosphoenolpyruvate--protein phosphotransferase
5607 RJUY01000014.1 ROQ88573.1 open 981 [NA] 326 [AA] 12543-13523 EDF72_5724 lipoic acid synthetase
5608 RJUY01000014.1 ROQ88574.1 open 726 [NA] 241 [AA] 13534-14259 EDF72_5725 lipoyl(octanoyl) transferase
5609 RJUY01000014.1 ROQ88575.1 open 318 [NA] 105 [AA] 14256-14573 EDF72_5726 hypothetical protein
5610 RJUY01000014.1 ROQ88576.1 open 483 [NA] 160 [AA] 14860-15342 EDF72_5727 ATP synthase protein I
5611 RJUY01000014.1 ROQ88577.1 open 864 [NA] 287 [AA] 15364-16227 EDF72_5728 F-type H+-transporting ATPase subunit a
5612 RJUY01000014.1 ROQ88578.1 open 249 [NA] 82 [AA] 16279-16527 EDF72_5729 ATP synthase F0 subcomplex C subunit
5613 RJUY01000014.1 ROQ88579.1 open 471 [NA] 156 [AA] 16563-17033 EDF72_5730 F-type H+-transporting ATPase subunit b
5614 RJUY01000014.1 ROQ88580.1 open 540 [NA] 179 [AA] 17046-17585 EDF72_5731 ATP synthase F1 subcomplex delta subunit
5615 RJUY01000014.1 ROQ88581.1 open 1554 [NA] 517 [AA] 17634-19187 EDF72_5732 ATP synthase F1 subcomplex alpha subunit
5616 RJUY01000014.1 ROQ88582.1 open 873 [NA] 290 [AA] 19206-20078 EDF72_5733 ATP synthase F1 subcomplex gamma subunit
5617 RJUY01000014.1 ROQ88583.1 open 1410 [NA] 469 [AA] 20113-21522 EDF72_5734 ATP synthase F1 subcomplex beta subunit
5618 RJUY01000014.1 ROQ88584.1 open 417 [NA] 138 [AA] 21683-22099 EDF72_5735 ATP synthase F1 subcomplex epsilon subunit
5619 RJUY01000014.1 ROQ88585.1 open 261 [NA] 86 [AA] 22192-22452 EDF72_5736 hypothetical protein
5620 RJUY01000014.1 ROQ88586.1 open 543 [NA] 180 [AA] 22561-23103 EDF72_5737 putative membrane protein
5621 RJUY01000014.1 ROQ88587.1 open 906 [NA] 301 [AA] 23105-24010 EDF72_5738 uncharacterized protein
5622 RJUY01000014.1 ROQ88588.1 open 588 [NA] 195 [AA] 24020-24607 EDF72_5739 LemA protein
5623 RJUY01000014.1 ROQ88589.1 open 987 [NA] 328 [AA] 24756-25742 EDF72_5740 hypothetical protein
5624 RJUY01000014.1 ROQ88590.1 open 552 [NA] 183 [AA] 25748-26299 EDF72_5741 DUF2946 family protein
5625 RJUY01000014.1 ROQ88591.1 open 543 [NA] 180 [AA] 26345-26887 EDF72_5742 cytochrome c5
5626 RJUY01000014.1 ROQ88592.1 open 1458 [NA] 485 [AA] 27106-28563 EDF72_5743 multidrug efflux system outer membrane protein
5627 RJUY01000014.1 ROQ88593.1 open 3156 [NA] 1051 [AA] 28556-31711 EDF72_5744 multidrug efflux pump
5628 RJUY01000014.1 ROQ88594.1 open 1293 [NA] 430 [AA] 31727-33019 EDF72_5745 membrane fusion protein (multidrug efflux system)
5629 RJUY01000014.1 ROQ88595.1 open 666 [NA] 221 [AA] 33179-33844 EDF72_5746 TetR family transcriptional regulator
5630 RJUY01000014.1 ROQ88596.1 open 121 [NA] 40 [AA] 34503->34623 EDF72_5751 elongation factor Tu-like protein