Genome Explorer: Escherichia coli PF9285 (SEQF5818.1)
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NCBI Annotation for SEQF5818.1
| Genome selected: Escherichia coli PF9285 | |||
| Contigs: | 5 | Bases: | 5441892 bps |
| CDS: | 258 | rRNA: | 22 |
| tmRNA: | 1 | tRNA: | 90 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 5001 | CP038793.1 | QBZ35974.1 | open | 192 [NA] | 63 [AA] | 13170-13361 | E5M00_26925 | hypothetical protein |
| 5002 | CP038793.1 | QBZ35975.1 | open | 324 [NA] | 107 [AA] | 13457-13780 | E5M00_26935 | hypothetical protein |
| 5003 | CP038793.1 | QBZ35976.1 | open | 207 [NA] | 68 [AA] | 13930-14136 | E5M00_26940 | hypothetical protein |
| 5004 | CP038793.1 | QBZ35977.1 | open | 528 [NA] | 175 [AA] | 14133-14660 | E5M00_26945 | single-stranded DNA-binding protein |
| 5005 | CP038793.1 | QBZ35978.1 | open | 234 [NA] | 77 [AA] | 14718-14951 | E5M00_26950 | DUF905 domain-containing protein |
| 5006 | CP038793.1 | QBZ35979.1 | open | 1959 [NA] | 652 [AA] | 15010-16968 | E5M00_26955 | ParB/RepB/Spo0J family partition protein |
| 5007 | CP038793.1 | QBZ35980.1 | open | 435 [NA] | 144 [AA] | 17023-17457 | E5M00_26960 | conjugation system SOS inhibitor PsiB |
| 5008 | CP038793.1 | QBZ35981.1 | open | 720 [NA] | 239 [AA] | 17454-18173 | E5M00_26965 | plasmid SOS inhibition protein A |
| 5009 | CP038793.1 | QBZ35982.1 | open | 597 [NA] | 198 [AA] | 18170-18766 | E5M00_26970 | hypothetical protein |
| 5010 | CP038793.1 | QBZ35983.1 | open | 501 [NA] | 166 [AA] | 19228-19728 | E5M00_26980 | antirestriction protein ArdA |
| 5011 | CP038793.1 | QBZ35984.1 | open | 282 [NA] | 93 [AA] | 19944-20225 | E5M00_26985 | hypothetical protein |
| 5012 | CP038793.1 | QBZ35985.1 | open | 216 [NA] | 71 [AA] | 20248-20463 | E5M00_26990 | hypothetical protein |
| 5013 | CP038793.1 | QBZ35986.1 | open | 267 [NA] | 88 [AA] | 20987-21253 | E5M00_27000 | hypothetical protein |
| 5014 | CP038793.1 | QBZ35987.1 | open | 390 [NA] | 129 [AA] | 21430-21819 | E5M00_27005 | cobalamin biosynthesis protein CbiX |
| 5015 | CP038793.1 | QBZ35988.1 | open | 915 [NA] | 304 [AA] | 21816-22730 | E5M00_27010 | Rpn family recombination-promoting nuclease/putative transposase |
| 5016 | CP038793.1 | QBZ35989.1 | open | 270 [NA] | 89 [AA] | 22730-22999 | E5M00_27015 | hypothetical protein |
| 5017 | CP038793.1 | QBZ35990.1 | open | 252 [NA] | 83 [AA] | 23030-23281 | E5M00_27020 | XRE family transcriptional regulator |
| 5018 | CP038793.1 | QBZ35991.1 | open | 849 [NA] | 282 [AA] | 23861-24709 | E5M00_27035 | DUF4942 domain-containing protein |
| 5019 | CP038793.1 | QBZ35992.1 | open | 336 [NA] | 111 [AA] | 24794-25129 | E5M00_27040 | molybdopterin-guanine dinucleotide biosynthesis protein MobC |
| 5020 | CP038793.1 | QBZ35993.1 | open | 333 [NA] | 110 [AA] | 25362-25694 | E5M00_27045 | nikA protein |
| 5021 | CP038793.1 | QBZ35994.1 | open | 2712 [NA] | 903 [AA] | 25706-28417 | E5M00_27050 | relaxase NikB |
| 5022 | CP038793.1 | QBZ35995.1 | open | 432 [NA] | 143 [AA] | 28485-28916 | E5M00_27055 | tolA family protein |
| 5023 | CP038793.1 | QBZ35996.1 | open | 231 [NA] | 76 [AA] | 29014-29244 | E5M00_27060 | hypothetical protein |
| 5024 | CP038793.1 | QBZ35997.1 | open | 294 [NA] | 97 [AA] | 29304-29597 | E5M00_27065 | hypothetical protein |
| 5025 | CP038793.1 | QBZ35998.1 | open | 2304 [NA] | 767 [AA] | 29723-32026 | E5M00_27070 | conjugal transfer protein TrbC |
| 5026 | CP038793.1 | QBZ35999.1 | open | 1125 [NA] | 374 [AA] | 32007-33131 | E5M00_27075 | DsbC family protein |
| 5027 | CP038793.1 | QBZ36000.1 | open | 291 [NA] | 96 [AA] | 34055-34345 | E5M00_27080 | hypothetical protein |
| 5028 | CP038793.1 | QBZ36001.1 | open | 186 [NA] | 61 [AA] | 35258-35443 | E5M00_27085 | hypothetical protein |
| 5029 | CP038793.1 | QBZ36002.1 | open | 468 [NA] | 155 [AA] | 36150-36617 | E5M00_27095 | thermonuclease |
| 5030 | CP038793.1 | QBZ36003.1 | open | 624 [NA] | 207 [AA] | 36777-37400 | E5M00_27100 | DNA-binding protein |
| 5031 | CP038793.1 | QBZ36004.1 | open | 252 [NA] | 83 [AA] | 37350-37601 | E5M00_27105 | neurotensin receptor R8 |
| 5032 | CP038793.1 | QBZ36005.1 | open | 216 [NA] | 71 [AA] | 37598-37813 | E5M00_27110 | hypothetical protein |
| 5033 | CP038793.1 | QBZ36006.1 | open | 369 [NA] | 122 [AA] | 37817-38185 | E5M00_27115 | hypothetical protein |
| 5034 | CP038793.1 | QBZ36007.1 | open | 192 [NA] | 63 [AA] | 38197-38388 | E5M00_27120 | hypothetical protein |
| 5035 | CP038793.1 | QBZ36008.1 | open | 153 [NA] | 50 [AA] | 39057-39209 | E5M00_27130 | protein PndA |
| 5036 | CP038793.1 | QBZ36009.1 | open | 1587 [NA] | 528 [AA] | 39347-40933 | E5M00_27135 | RNA polymerase subunit sigma |
| 5037 | CP038793.1 | QBZ36010.1 | open | 651 [NA] | 216 [AA] | 41207-41857 | E5M00_27140 | ethanolamine utilization protein EutE |
| 5038 | CP038793.1 | QBZ36011.1 | open | 2166 [NA] | 721 [AA] | 41928-44093 | E5M00_27145 | hypothetical protein |
| 5039 | CP038793.1 | QBZ36012.1 | open | 570 [NA] | 189 [AA] | 44166-44735 | E5M00_27150 | conjugal transfer protein TraX |
| 5040 | CP038793.1 | QBZ36013.1 | open | 618 [NA] | 205 [AA] | 45898-46515 | E5M00_27160 | conjugal transfer protein TraV |
| 5041 | CP038793.1 | QBZ36014.1 | open | 3045 [NA] | 1014 [AA] | 46515-49559 | E5M00_27165 | ATP-binding protein |
| 5042 | CP038793.1 | QBZ36015.1 | open | 546 [NA] | 181 [AA] | 49784-50329 | E5M00_27170 | hypothetical protein |
| 5043 | CP038793.1 | QBZ36016.1 | open | 627 [NA] | 208 [AA] | 51100-51726 | E5M00_27180 | conjugal transfer protein TraT |
| 5044 | CP038793.1 | QBZ36017.1 | open | 252 [NA] | 83 [AA] | 51833-52084 | E5M00_27185 | TraS |
| 5045 | CP038793.1 | QBZ36018.1 | open | 399 [NA] | 132 [AA] | 52141-52539 | E5M00_27190 | conjugal transfer protein TraR |
| 5046 | CP038793.1 | QBZ36019.1 | open | 714 [NA] | 237 [AA] | 53113-53826 | E5M00_27200 | conjugal transfer protein |
| 5047 | CP038793.1 | QBZ36020.1 | open | 1332 [NA] | 443 [AA] | 53823-55154 | E5M00_27205 | conjugal transfer protein TraO |
| 5048 | CP038793.1 | QBZ36021.1 | open | 975 [NA] | 324 [AA] | 55158-56132 | E5M00_27210 | conjugal transfer protein TraN |
| 5049 | CP038793.1 | QBZ36022.1 | open | 696 [NA] | 231 [AA] | 56143-56838 | E5M00_27215 | conjugal transfer protein TraM |
| 5050 | CP038793.1 | QBZ36023.1 | open | 351 [NA] | 116 [AA] | 56850-57200 | E5M00_27220 | conjugal transfer protein |
| 5051 | CP038793.1 | QBZ36024.1 | open | 4017 [NA] | 1338 [AA] | 57217-61233 | E5M00_27225 | DNA primase |
| 5052 | CP038793.1 | QBZ36025.1 | open | 291 [NA] | 96 [AA] | 61297-61587 | E5M00_27230 | conjugal transfer protein |
| 5053 | CP038793.1 | QBZ36026.1 | open | 1149 [NA] | 382 [AA] | 61584-62732 | E5M00_27235 | plasmid transfer ATPase TraJ |
| 5054 | CP038793.1 | QBZ36027.1 | open | 837 [NA] | 278 [AA] | 62716-63552 | E5M00_27240 | conjugal transfer protein |
| 5055 | CP038793.1 | QBZ36028.1 | open | 453 [NA] | 150 [AA] | 63549-64001 | E5M00_27245 | hypothetical protein |
| 5056 | CP038793.1 | QBZ36029.1 | open | 1203 [NA] | 400 [AA] | 64360-65562 | E5M00_27250 | conjugal transfer protein TraF |
| 5057 | CP038793.1 | QBZ36030.1 | open | 822 [NA] | 273 [AA] | 65652-66473 | E5M00_27255 | conjugal transfer protein TraE |
| 5058 | CP038793.1 | QBZ36031.1 | open | 321 [NA] | 106 [AA] | 66733-67053 | E5M00_27260 | hypothetical protein |
| 5059 | CP038793.1 | QBZ36032.1 | open | 291 [NA] | 96 [AA] | 67145-67435 | E5M00_27265 | hypothetical protein |
| 5060 | CP038793.1 | QBZ36033.1 | open | 1170 [NA] | 389 [AA] | 67477-68646 | E5M00_27270 | site-specific integrase |
| 5061 | CP038793.1 | QBZ36034.1 | open | 1365 [NA] | 454 [AA] | 69261-70625 | E5M00_27285 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV |
| 5062 | CP038793.1 | QBZ36035.1 | open | 636 [NA] | 211 [AA] | 70630-71265 | E5M00_27290 | prepilin peptidase |
| 5063 | CP038793.1 | QBZ36036.1 | open | 474 [NA] | 157 [AA] | 71284-71757 | E5M00_27295 | lytic transglycosylase |
| 5064 | CP038793.1 | QBZ36037.1 | open | 537 [NA] | 178 [AA] | 71811-72347 | E5M00_27300 | prepilin-type cleavage/methylation domain-containing protein |
| 5065 | CP038793.1 | QBZ36038.1 | open | 1509 [NA] | 502 [AA] | 73523-75031 | E5M00_27310 | type II secretion protein E |
| 5066 | CP038793.1 | QBZ36039.1 | open | 453 [NA] | 150 [AA] | 75116-75568 | E5M00_27315 | type IV pilus biogenesis protein PilP |
| 5067 | CP038793.1 | QBZ36040.1 | open | 1296 [NA] | 431 [AA] | 75558-76853 | E5M00_27320 | pilus assembly protein |
| 5068 | CP038793.1 | QBZ36041.1 | open | 1620 [NA] | 539 [AA] | 76874-78493 | E5M00_27325 | PilN family type IVB pilus formation outer membrane protein |
| 5069 | CP038793.1 | QBZ36042.1 | open | 438 [NA] | 145 [AA] | 78524-78961 | E5M00_27330 | pilM |
| 5070 | CP038793.1 | QBZ36043.1 | open | 1068 [NA] | 355 [AA] | 78966-80033 | E5M00_27335 | pilus assembly protein |
| 5071 | CP038793.1 | QBZ36044.1 | open | 441 [NA] | 146 [AA] | 80136-80576 | E5M00_27340 | hypothetical protein |
| 5072 | CP038793.1 | QBZ36045.1 | open | 888 [NA] | 295 [AA] | 80569-81456 | E5M00_27345 | hypothetical protein |
| 5073 | CP038793.1 | QBZ36046.1 | open | 246 [NA] | 81 [AA] | 81793-82038 | E5M00_27350 | hypothetical protein |
| 5074 | CP038793.1 | QBZ36047.1 | open | 336 [NA] | 111 [AA] | 82072-82407 | E5M00_27355 | hypothetical protein |
| 5075 | CP038793.1 | QBZ36048.1 | open | 318 [NA] | 105 [AA] | 82524-82841 | E5M00_27360 | pilus assembly protein PilI |
| 5076 | CP038793.1 | QBZ36049.1 | open | 1695 [NA] | 564 [AA] | 82847-84541 | E5M00_27365 | flotillin family protein |
| 5077 | CP038793.1 | QBZ36050.1 | open | 621 [NA] | 206 [AA] | 84568-85188 | E5M00_27370 | DUF1449 family protein |
| 5078 | CP038793.1 | QBZ36051.1 | open | 150 [NA] | 49 [AA] | 85342-85491 | E5M00_27375 | conjugal transfer protein TraC |
| 5079 | CP038793.1 | QBZ36052.1 | open | 666 [NA] | 221 [AA] | 85455-86120 | E5M00_27380 | traC |
| 5080 | CP038793.1 | QBZ36053.1 | open | 642 [NA] | 213 [AA] | 86261-86902 | E5M00_27385 | transcription termination factor NusG |
| 5081 | CP038793.1 | QBZ36054.1 | open | 90 [NA] | 29 [AA] | 87528-13 | E5M00_26805 | positive regulator for repZ translation |
| 5082 | CP038793.1 | QBZ36055.1 | open | 1527 [NA] | 508 [AA] | 4608-6134 | E5M00_26855 | ATP-dependent helicase |
| 5083 | CP038793.1 | QBZ36056.1 | open | 303 [NA] | 100 [AA] | 12402-12704 | E5M00_26915 | antirestriction protein |
| 5084 | CP038793.1 | QBZ36057.1 | open | 225 [NA] | 74 [AA] | 11883-12107 | E5M00_26905 | DUF1472 domain-containing protein |
| 5085 | CP038793.1 | QBZ36058.1 | open | 243 [NA] | 80 [AA] | 12071-12313 | E5M00_26910 | DUF1472 domain-containing protein |
| 5086 | CP038793.1 | QBZ36059.1 | open | 435 [NA] | 144 [AA] | 20460-20894 | E5M00_26995 | post-segregation killing protein PndC |
| 5087 | CP038793.1 | QBZ36060.1 | open | 252 [NA] | 83 [AA] | 35509-35760 | E5M00_27090 | hypothetical protein |
| 5088 | CP038793.1 | QBZ36061.1 | open | 273 [NA] | 90 [AA] | 38485-38757 | E5M00_27125 | hypothetical protein |
| 5089 | CP038793.1 | QBZ36062.1 | open | 1089 [NA] | 362 [AA] | 44732-45820 | E5M00_27155 | conjugal transfer protein |
| 5090 | CP038793.1 | QBZ36063.1 | open | 381 [NA] | 126 [AA] | 50302-50682 | E5M00_27175 | hypothetical protein |
| 5091 | CP038793.1 | QBZ36064.1 | open | 528 [NA] | 175 [AA] | 52586-53113 | E5M00_27195 | conjugal transfer protein TraQ |
| 5092 | CP038793.1 | QBZ36065.1 | open | 273 [NA] | 90 [AA] | 68701-68973 | E5M00_27275 | shufflon protein C |
| 5093 | CP038793.1 | QBZ36066.1 | open | 1101 [NA] | 366 [AA] | 72421-73521 | E5M00_27305 | type II secretion protein F |
| 5094 | CP038793.1 | QBZ36067.1 | open | 864 [NA] | 287 [AA] | 10-873 | E5M00_26810 | incFII family plasmid replication initiator RepA |
| 5095 | CP038794.1 | QBZ36068.1 | open | 195 [NA] | 64 [AA] | 271-465 | E5M00_27390 | Rop family plasmid primer RNA-binding protein |
| 5096 | CP038794.1 | QBZ36069.1 | open | 957 [NA] | 318 [AA] | 1541-2497 | E5M00_27400 | hypothetical protein |
| 5097 | CP038794.1 | QBZ36070.1 | open | 867 [NA] | 288 [AA] | 2481-3347 | E5M00_27405 | nucleotidyl transferase AbiEii/AbiGii toxin family protein |
| 5098 | CP038794.1 | QBZ36071.1 | open | 654 [NA] | 217 [AA] | 3344-3997 | E5M00_27410 | protein phosphatase 2C family protein |
| 5099 | CP038794.1 | QBZ36072.1 | open | 243 [NA] | 80 [AA] | 4388-4630 | E5M00_27415 | hypothetical protein |
| 5100 | CP038794.1 | QBZ36073.1 | open | 225 [NA] | 74 [AA] | 1005-1229 | E5M00_27395 | hypothetical protein |
| 5101 | CP038795.1 | QBZ36074.1 | open | 702 [NA] | 233 [AA] | 194-895 | E5M00_27420 | RepB family plasmid replication initiator protein |
| 5102 | CP038795.1 | QBZ36075.1 | open | 291 [NA] | 96 [AA] | 1428-1718 | E5M00_27430 | mobilization protein |
| 5103 | CP038795.1 | QBZ36076.1 | open | 2148 [NA] | 715 [AA] | 1889-4036 | E5M00_27435 | conjugal transfer protein |